Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
ATPAF2Q8N5M1 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
ATPAF2Q8N5M1 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.5■□□□□ 0.87
ATPAF2Q8N5M1 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ATPAF2Q8N5M1 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ATPAF2Q8N5M1 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
ATPAF2Q8N5M1 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
ATPAF2Q8N5M1 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ATPAF2Q8N5M1 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ATPAF2Q8N5M1 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
ATPAF2Q8N5M1 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ATPAF2Q8N5M1 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.49■□□□□ 0.87
ATPAF2Q8N5M1 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ATPAF2Q8N5M1 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
ATPAF2Q8N5M1 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.49■□□□□ 0.87
ATPAF2Q8N5M1 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.49■□□□□ 0.87
ATPAF2Q8N5M1 AC083880.1-201ENST00000608266 535 ntBASIC20.49■□□□□ 0.87
ATPAF2Q8N5M1 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.49■□□□□ 0.87
ATPAF2Q8N5M1 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
ATPAF2Q8N5M1 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ATPAF2Q8N5M1 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ATPAF2Q8N5M1 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ATPAF2Q8N5M1 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.49■□□□□ 0.87
ATPAF2Q8N5M1 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
ATPAF2Q8N5M1 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.49■□□□□ 0.87
ATPAF2Q8N5M1 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ATPAF2Q8N5M1 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ATPAF2Q8N5M1 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.49■□□□□ 0.87
ATPAF2Q8N5M1 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATPAF2Q8N5M1 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
ATPAF2Q8N5M1 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
ATPAF2Q8N5M1 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATPAF2Q8N5M1 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATPAF2Q8N5M1 KRT16P6-202ENST00000425692 1426 ntBASIC20.48■□□□□ 0.87
ATPAF2Q8N5M1 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
ATPAF2Q8N5M1 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATPAF2Q8N5M1 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATPAF2Q8N5M1 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATPAF2Q8N5M1 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.48■□□□□ 0.87
ATPAF2Q8N5M1 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ATPAF2Q8N5M1 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.48■□□□□ 0.87
ATPAF2Q8N5M1 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
ATPAF2Q8N5M1 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.48■□□□□ 0.87
ATPAF2Q8N5M1 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATPAF2Q8N5M1 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATPAF2Q8N5M1 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATPAF2Q8N5M1 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
ATPAF2Q8N5M1 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATPAF2Q8N5M1 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATPAF2Q8N5M1 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATPAF2Q8N5M1 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATPAF2Q8N5M1 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATPAF2Q8N5M1 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATPAF2Q8N5M1 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
ATPAF2Q8N5M1 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATPAF2Q8N5M1 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATPAF2Q8N5M1 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.47■□□□□ 0.87
ATPAF2Q8N5M1 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
ATPAF2Q8N5M1 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATPAF2Q8N5M1 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.47■□□□□ 0.87
ATPAF2Q8N5M1 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.47■□□□□ 0.87
ATPAF2Q8N5M1 TCF3P1-201ENST00000423021 1937 ntBASIC20.47■□□□□ 0.87
ATPAF2Q8N5M1 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
ATPAF2Q8N5M1 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATPAF2Q8N5M1 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATPAF2Q8N5M1 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATPAF2Q8N5M1 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATPAF2Q8N5M1 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
ATPAF2Q8N5M1 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATPAF2Q8N5M1 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATPAF2Q8N5M1 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.46■□□□□ 0.87
ATPAF2Q8N5M1 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATPAF2Q8N5M1 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.46■□□□□ 0.87
ATPAF2Q8N5M1 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATPAF2Q8N5M1 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.46■□□□□ 0.87
ATPAF2Q8N5M1 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.46■□□□□ 0.87
ATPAF2Q8N5M1 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATPAF2Q8N5M1 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
ATPAF2Q8N5M1 PCDHAC2-203ENST00000615316 3011 ntBASIC20.46■□□□□ 0.87
ATPAF2Q8N5M1 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.46■□□□□ 0.87
ATPAF2Q8N5M1 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ATPAF2Q8N5M1 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
ATPAF2Q8N5M1 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
ATPAF2Q8N5M1 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
ATPAF2Q8N5M1 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ATPAF2Q8N5M1 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.45■□□□□ 0.86
ATPAF2Q8N5M1 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.45■□□□□ 0.86
ATPAF2Q8N5M1 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ATPAF2Q8N5M1 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.45■□□□□ 0.86
ATPAF2Q8N5M1 AL390719.1-204ENST00000412397 1219 ntBASIC20.45■□□□□ 0.86
ATPAF2Q8N5M1 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.45■□□□□ 0.86
ATPAF2Q8N5M1 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.45■□□□□ 0.86
ATPAF2Q8N5M1 HLA-B-256ENST00000639848 1089 ntBASIC20.45■□□□□ 0.86
ATPAF2Q8N5M1 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
ATPAF2Q8N5M1 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ATPAF2Q8N5M1 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ATPAF2Q8N5M1 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
ATPAF2Q8N5M1 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.45■□□□□ 0.86
ATPAF2Q8N5M1 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ATPAF2Q8N5M1 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms