Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 AC100791.3-201ENST00000617619 330 ntBASIC17.68■□□□□ 0.42
LINC00346Q8IVM7 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
LINC00346Q8IVM7 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LINC00346Q8IVM7 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
LINC00346Q8IVM7 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
LINC00346Q8IVM7 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
LINC00346Q8IVM7 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LINC00346Q8IVM7 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LINC00346Q8IVM7 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
LINC00346Q8IVM7 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.67■□□□□ 0.42
LINC00346Q8IVM7 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
LINC00346Q8IVM7 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LINC00346Q8IVM7 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LINC00346Q8IVM7 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LINC00346Q8IVM7 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.67■□□□□ 0.42
LINC00346Q8IVM7 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LINC00346Q8IVM7 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LINC00346Q8IVM7 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.67■□□□□ 0.42
LINC00346Q8IVM7 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
LINC00346Q8IVM7 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LINC00346Q8IVM7 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LINC00346Q8IVM7 KRT18P68-201ENST00000392293 1000 ntBASIC17.67■□□□□ 0.42
LINC00346Q8IVM7 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
LINC00346Q8IVM7 AC004911.1-201ENST00000416316 871 ntBASIC17.67■□□□□ 0.42
LINC00346Q8IVM7 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.67■□□□□ 0.42
LINC00346Q8IVM7 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.67■□□□□ 0.42
LINC00346Q8IVM7 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LINC00346Q8IVM7 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LINC00346Q8IVM7 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC17.67■□□□□ 0.42
LINC00346Q8IVM7 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LINC00346Q8IVM7 IKBKGP1-201ENST00000612193 1073 ntBASIC17.67■□□□□ 0.42
LINC00346Q8IVM7 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LINC00346Q8IVM7 AC105020.6-201ENST00000621523 1217 ntBASIC17.67■□□□□ 0.42
LINC00346Q8IVM7 PARP1-210ENST00000629232 477 ntTSL 5 BASIC17.67■□□□□ 0.42
LINC00346Q8IVM7 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LINC00346Q8IVM7 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.67■□□□□ 0.42
LINC00346Q8IVM7 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
LINC00346Q8IVM7 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
LINC00346Q8IVM7 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LINC00346Q8IVM7 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.67■□□□□ 0.42
LINC00346Q8IVM7 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
LINC00346Q8IVM7 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.66■□□□□ 0.42
LINC00346Q8IVM7 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LINC00346Q8IVM7 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LINC00346Q8IVM7 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LINC00346Q8IVM7 AC125437.2-201ENST00000625180 2167 ntBASIC17.66■□□□□ 0.42
LINC00346Q8IVM7 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LINC00346Q8IVM7 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
LINC00346Q8IVM7 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LINC00346Q8IVM7 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.66■□□□□ 0.42
LINC00346Q8IVM7 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC17.66■□□□□ 0.42
LINC00346Q8IVM7 CYP2T3P-201ENST00000601990 817 ntBASIC17.66■□□□□ 0.42
LINC00346Q8IVM7 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
LINC00346Q8IVM7 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
LINC00346Q8IVM7 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.66■□□□□ 0.42
LINC00346Q8IVM7 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LINC00346Q8IVM7 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LINC00346Q8IVM7 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
LINC00346Q8IVM7 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
LINC00346Q8IVM7 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC17.66■□□□□ 0.42
LINC00346Q8IVM7 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LINC00346Q8IVM7 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LINC00346Q8IVM7 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LINC00346Q8IVM7 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.65■□□□□ 0.42
LINC00346Q8IVM7 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LINC00346Q8IVM7 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LINC00346Q8IVM7 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.65■□□□□ 0.42
LINC00346Q8IVM7 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
LINC00346Q8IVM7 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.65■□□□□ 0.42
LINC00346Q8IVM7 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC17.65■□□□□ 0.42
LINC00346Q8IVM7 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LINC00346Q8IVM7 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC17.65■□□□□ 0.42
LINC00346Q8IVM7 AC092437.1-201ENST00000624794 1048 ntBASIC17.65■□□□□ 0.42
LINC00346Q8IVM7 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LINC00346Q8IVM7 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
LINC00346Q8IVM7 AL158211.5-201ENST00000623583 2518 ntBASIC17.65■□□□□ 0.42
LINC00346Q8IVM7 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LINC00346Q8IVM7 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LINC00346Q8IVM7 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LINC00346Q8IVM7 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.42
LINC00346Q8IVM7 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
LINC00346Q8IVM7 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LINC00346Q8IVM7 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LINC00346Q8IVM7 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LINC00346Q8IVM7 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LINC00346Q8IVM7 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LINC00346Q8IVM7 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LINC00346Q8IVM7 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
LINC00346Q8IVM7 MIR935-201ENST00000401179 91 ntBASIC17.64■□□□□ 0.41
LINC00346Q8IVM7 AC093787.1-201ENST00000450396 207 ntBASIC17.64■□□□□ 0.41
LINC00346Q8IVM7 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.64■□□□□ 0.41
LINC00346Q8IVM7 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LINC00346Q8IVM7 AC005181.1-201ENST00000604782 1256 ntBASIC17.64■□□□□ 0.41
LINC00346Q8IVM7 MDK-213ENST00000617138 635 ntTSL 2 BASIC17.64■□□□□ 0.41
LINC00346Q8IVM7 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
LINC00346Q8IVM7 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
LINC00346Q8IVM7 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LINC00346Q8IVM7 PTBP1P-201ENST00000554374 1601 ntBASIC17.64■□□□□ 0.41
LINC00346Q8IVM7 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LINC00346Q8IVM7 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms