Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC12.42□□□□□ -0.42
VPS13BQ7Z7G8 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
VPS13BQ7Z7G8 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
VPS13BQ7Z7G8 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC12.41□□□□□ -0.42
VPS13BQ7Z7G8 AP005242.2-201ENST00000580065 1175 ntBASIC12.41□□□□□ -0.42
VPS13BQ7Z7G8 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VPS13BQ7Z7G8 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
VPS13BQ7Z7G8 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VPS13BQ7Z7G8 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
VPS13BQ7Z7G8 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VPS13BQ7Z7G8 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
VPS13BQ7Z7G8 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC12.41□□□□□ -0.42
VPS13BQ7Z7G8 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
VPS13BQ7Z7G8 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
VPS13BQ7Z7G8 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC12.41□□□□□ -0.42
VPS13BQ7Z7G8 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
VPS13BQ7Z7G8 PPP1R14BP5-201ENST00000440334 435 ntBASIC12.41□□□□□ -0.42
VPS13BQ7Z7G8 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
VPS13BQ7Z7G8 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC12.41□□□□□ -0.42
VPS13BQ7Z7G8 FAM87A-204ENST00000613235 858 ntBASIC12.41□□□□□ -0.42
VPS13BQ7Z7G8 AL117328.2-201ENST00000624617 1940 ntBASIC12.41□□□□□ -0.42
VPS13BQ7Z7G8 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VPS13BQ7Z7G8 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VPS13BQ7Z7G8 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
VPS13BQ7Z7G8 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC12.41□□□□□ -0.42
VPS13BQ7Z7G8 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VPS13BQ7Z7G8 MESTP1-201ENST00000404287 994 ntBASIC12.41□□□□□ -0.42
VPS13BQ7Z7G8 BX664615.1-201ENST00000443558 458 ntBASIC12.41□□□□□ -0.42
VPS13BQ7Z7G8 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
VPS13BQ7Z7G8 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC12.41□□□□□ -0.42
VPS13BQ7Z7G8 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
VPS13BQ7Z7G8 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VPS13BQ7Z7G8 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
VPS13BQ7Z7G8 AC027702.1-201ENST00000563810 1770 ntBASIC12.41□□□□□ -0.42
VPS13BQ7Z7G8 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
VPS13BQ7Z7G8 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC12.4□□□□□ -0.42
VPS13BQ7Z7G8 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC12.4□□□□□ -0.42
VPS13BQ7Z7G8 ECEL1P2-202ENST00000465689 757 ntBASIC12.4□□□□□ -0.42
VPS13BQ7Z7G8 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC12.4□□□□□ -0.42
VPS13BQ7Z7G8 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC12.4□□□□□ -0.42
VPS13BQ7Z7G8 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VPS13BQ7Z7G8 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VPS13BQ7Z7G8 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC12.4□□□□□ -0.42
VPS13BQ7Z7G8 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VPS13BQ7Z7G8 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC12.4□□□□□ -0.42
VPS13BQ7Z7G8 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
VPS13BQ7Z7G8 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC12.4□□□□□ -0.42
VPS13BQ7Z7G8 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
VPS13BQ7Z7G8 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
VPS13BQ7Z7G8 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
VPS13BQ7Z7G8 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
VPS13BQ7Z7G8 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
VPS13BQ7Z7G8 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
VPS13BQ7Z7G8 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VPS13BQ7Z7G8 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
VPS13BQ7Z7G8 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VPS13BQ7Z7G8 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VPS13BQ7Z7G8 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC12.4□□□□□ -0.42
VPS13BQ7Z7G8 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
VPS13BQ7Z7G8 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
VPS13BQ7Z7G8 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
VPS13BQ7Z7G8 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC12.4□□□□□ -0.43
VPS13BQ7Z7G8 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC12.4□□□□□ -0.43
VPS13BQ7Z7G8 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC12.4□□□□□ -0.43
VPS13BQ7Z7G8 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC12.4□□□□□ -0.43
VPS13BQ7Z7G8 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
VPS13BQ7Z7G8 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC12.4□□□□□ -0.43
VPS13BQ7Z7G8 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
VPS13BQ7Z7G8 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
VPS13BQ7Z7G8 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
VPS13BQ7Z7G8 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC12.39□□□□□ -0.43
VPS13BQ7Z7G8 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
VPS13BQ7Z7G8 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC12.39□□□□□ -0.43
VPS13BQ7Z7G8 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
VPS13BQ7Z7G8 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
VPS13BQ7Z7G8 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC12.39□□□□□ -0.43
VPS13BQ7Z7G8 AC023632.3-201ENST00000521633 145 ntBASIC12.39□□□□□ -0.43
VPS13BQ7Z7G8 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
VPS13BQ7Z7G8 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
VPS13BQ7Z7G8 AF106564.1-201ENST00000607058 2553 ntBASIC12.39□□□□□ -0.43
VPS13BQ7Z7G8 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
VPS13BQ7Z7G8 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
VPS13BQ7Z7G8 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
VPS13BQ7Z7G8 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
VPS13BQ7Z7G8 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
VPS13BQ7Z7G8 AL121829.2-201ENST00000620908 328 ntBASIC12.39□□□□□ -0.43
VPS13BQ7Z7G8 AP000550.4-202ENST00000639755 178 ntBASIC12.39□□□□□ -0.43
VPS13BQ7Z7G8 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
VPS13BQ7Z7G8 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
VPS13BQ7Z7G8 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
VPS13BQ7Z7G8 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC12.38□□□□□ -0.43
VPS13BQ7Z7G8 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
VPS13BQ7Z7G8 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC12.38□□□□□ -0.43
VPS13BQ7Z7G8 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC12.38□□□□□ -0.43
VPS13BQ7Z7G8 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC12.38□□□□□ -0.43
VPS13BQ7Z7G8 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC12.38□□□□□ -0.43
VPS13BQ7Z7G8 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
VPS13BQ7Z7G8 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
VPS13BQ7Z7G8 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
VPS13BQ7Z7G8 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms