Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZNF550Q7Z398 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ZNF550Q7Z398 AC010980.2-201ENST00000587099 1412 ntBASIC18.4■□□□□ 0.54
ZNF550Q7Z398 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
ZNF550Q7Z398 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
ZNF550Q7Z398 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
ZNF550Q7Z398 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
ZNF550Q7Z398 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZNF550Q7Z398 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
ZNF550Q7Z398 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ZNF550Q7Z398 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZNF550Q7Z398 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
ZNF550Q7Z398 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.39■□□□□ 0.53
ZNF550Q7Z398 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZNF550Q7Z398 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ZNF550Q7Z398 CD99P1-205ENST00000527459 561 ntBASIC18.39■□□□□ 0.53
ZNF550Q7Z398 AC098934.4-201ENST00000564127 592 ntBASIC18.39■□□□□ 0.53
ZNF550Q7Z398 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.39■□□□□ 0.53
ZNF550Q7Z398 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
ZNF550Q7Z398 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZNF550Q7Z398 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ZNF550Q7Z398 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ZNF550Q7Z398 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZNF550Q7Z398 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ZNF550Q7Z398 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZNF550Q7Z398 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZNF550Q7Z398 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.39■□□□□ 0.53
ZNF550Q7Z398 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ZNF550Q7Z398 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ZNF550Q7Z398 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZNF550Q7Z398 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.38■□□□□ 0.53
ZNF550Q7Z398 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ZNF550Q7Z398 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZNF550Q7Z398 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZNF550Q7Z398 PCDHAC2-203ENST00000615316 3011 ntBASIC18.38■□□□□ 0.53
ZNF550Q7Z398 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ZNF550Q7Z398 ABHD17AP1-201ENST00000358206 933 ntBASIC18.38■□□□□ 0.53
ZNF550Q7Z398 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZNF550Q7Z398 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.38■□□□□ 0.53
ZNF550Q7Z398 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ZNF550Q7Z398 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.38■□□□□ 0.53
ZNF550Q7Z398 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.38■□□□□ 0.53
ZNF550Q7Z398 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.38■□□□□ 0.53
ZNF550Q7Z398 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.38■□□□□ 0.53
ZNF550Q7Z398 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
ZNF550Q7Z398 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.38■□□□□ 0.53
ZNF550Q7Z398 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.38■□□□□ 0.53
ZNF550Q7Z398 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ZNF550Q7Z398 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.38■□□□□ 0.53
ZNF550Q7Z398 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.38■□□□□ 0.53
ZNF550Q7Z398 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.38■□□□□ 0.53
ZNF550Q7Z398 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ZNF550Q7Z398 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ZNF550Q7Z398 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.38■□□□□ 0.53
ZNF550Q7Z398 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF550Q7Z398 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF550Q7Z398 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
ZNF550Q7Z398 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF550Q7Z398 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF550Q7Z398 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF550Q7Z398 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF550Q7Z398 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF550Q7Z398 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF550Q7Z398 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF550Q7Z398 AL355472.2-201ENST00000422958 438 ntBASIC18.37■□□□□ 0.53
ZNF550Q7Z398 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.37■□□□□ 0.53
ZNF550Q7Z398 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF550Q7Z398 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF550Q7Z398 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.37■□□□□ 0.53
ZNF550Q7Z398 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.37■□□□□ 0.53
ZNF550Q7Z398 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.37■□□□□ 0.53
ZNF550Q7Z398 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.37■□□□□ 0.53
ZNF550Q7Z398 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF550Q7Z398 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.37■□□□□ 0.53
ZNF550Q7Z398 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.37■□□□□ 0.53
ZNF550Q7Z398 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF550Q7Z398 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF550Q7Z398 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF550Q7Z398 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.37■□□□□ 0.53
ZNF550Q7Z398 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.37■□□□□ 0.53
ZNF550Q7Z398 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF550Q7Z398 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF550Q7Z398 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF550Q7Z398 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF550Q7Z398 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.36■□□□□ 0.53
ZNF550Q7Z398 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.36■□□□□ 0.53
ZNF550Q7Z398 KRT8P17-201ENST00000453110 1448 ntBASIC18.36■□□□□ 0.53
ZNF550Q7Z398 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF550Q7Z398 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
ZNF550Q7Z398 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.36■□□□□ 0.53
ZNF550Q7Z398 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF550Q7Z398 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.36■□□□□ 0.53
ZNF550Q7Z398 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.36■□□□□ 0.53
ZNF550Q7Z398 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF550Q7Z398 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF550Q7Z398 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
ZNF550Q7Z398 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF550Q7Z398 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF550Q7Z398 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF550Q7Z398 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms