Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PTCRAQ6ISU1 KRT8P36-201ENST00000489121 1440 ntBASIC20.7■□□□□ 0.9
PTCRAQ6ISU1 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.7■□□□□ 0.9
PTCRAQ6ISU1 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PTCRAQ6ISU1 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
PTCRAQ6ISU1 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTCRAQ6ISU1 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTCRAQ6ISU1 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTCRAQ6ISU1 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTCRAQ6ISU1 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.7■□□□□ 0.9
PTCRAQ6ISU1 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
PTCRAQ6ISU1 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTCRAQ6ISU1 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTCRAQ6ISU1 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PTCRAQ6ISU1 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC20.7■□□□□ 0.9
PTCRAQ6ISU1 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
PTCRAQ6ISU1 AC004980.1-204ENST00000429707 299 ntBASIC20.7■□□□□ 0.9
PTCRAQ6ISU1 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
PTCRAQ6ISU1 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTCRAQ6ISU1 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTCRAQ6ISU1 AC069148.1-201ENST00000608741 768 ntBASIC20.7■□□□□ 0.9
PTCRAQ6ISU1 AC131212.4-201ENST00000623606 975 ntBASIC20.7■□□□□ 0.9
PTCRAQ6ISU1 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC20.7■□□□□ 0.9
PTCRAQ6ISU1 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.7■□□□□ 0.9
PTCRAQ6ISU1 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.7■□□□□ 0.9
PTCRAQ6ISU1 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PTCRAQ6ISU1 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTCRAQ6ISU1 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.7■□□□□ 0.9
PTCRAQ6ISU1 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.7■□□□□ 0.9
PTCRAQ6ISU1 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PTCRAQ6ISU1 AC127496.7-201ENST00000625110 1798 ntBASIC20.69■□□□□ 0.9
PTCRAQ6ISU1 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTCRAQ6ISU1 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTCRAQ6ISU1 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTCRAQ6ISU1 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PTCRAQ6ISU1 ANKRD20A18P-201ENST00000359341 492 ntBASIC20.69■□□□□ 0.9
PTCRAQ6ISU1 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC20.69■□□□□ 0.9
PTCRAQ6ISU1 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTCRAQ6ISU1 HOMER2P1-201ENST00000455653 964 ntBASIC20.69■□□□□ 0.9
PTCRAQ6ISU1 AL671277.2-201ENST00000458060 996 ntBASIC20.69■□□□□ 0.9
PTCRAQ6ISU1 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC20.69■□□□□ 0.9
PTCRAQ6ISU1 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.69■□□□□ 0.9
PTCRAQ6ISU1 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PTCRAQ6ISU1 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PTCRAQ6ISU1 AC141257.4-201ENST00000634557 245 ntBASIC20.69■□□□□ 0.9
PTCRAQ6ISU1 AC136944.6-201ENST00000634818 245 ntBASIC20.69■□□□□ 0.9
PTCRAQ6ISU1 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC20.69■□□□□ 0.9
PTCRAQ6ISU1 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTCRAQ6ISU1 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
PTCRAQ6ISU1 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.69■□□□□ 0.9
PTCRAQ6ISU1 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
PTCRAQ6ISU1 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC20.69■□□□□ 0.9
PTCRAQ6ISU1 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.69■□□□□ 0.9
PTCRAQ6ISU1 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.69■□□□□ 0.9
PTCRAQ6ISU1 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTCRAQ6ISU1 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.68■□□□□ 0.9
PTCRAQ6ISU1 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.68■□□□□ 0.9
PTCRAQ6ISU1 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PTCRAQ6ISU1 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PTCRAQ6ISU1 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTCRAQ6ISU1 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.68■□□□□ 0.9
PTCRAQ6ISU1 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTCRAQ6ISU1 BET1L-202ENST00000332865 533 ntTSL 5 BASIC20.68■□□□□ 0.9
PTCRAQ6ISU1 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
PTCRAQ6ISU1 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTCRAQ6ISU1 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
PTCRAQ6ISU1 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC20.68■□□□□ 0.9
PTCRAQ6ISU1 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC20.68■□□□□ 0.9
PTCRAQ6ISU1 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC20.68■□□□□ 0.9
PTCRAQ6ISU1 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.68■□□□□ 0.9
PTCRAQ6ISU1 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.68■□□□□ 0.9
PTCRAQ6ISU1 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC20.68■□□□□ 0.9
PTCRAQ6ISU1 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PTCRAQ6ISU1 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC20.68■□□□□ 0.9
PTCRAQ6ISU1 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PTCRAQ6ISU1 AC116407.4-201ENST00000623319 1061 ntBASIC20.68■□□□□ 0.9
PTCRAQ6ISU1 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.68■□□□□ 0.9
PTCRAQ6ISU1 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PTCRAQ6ISU1 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTCRAQ6ISU1 AC005332.1-201ENST00000577698 1310 ntBASIC20.68■□□□□ 0.9
PTCRAQ6ISU1 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTCRAQ6ISU1 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTCRAQ6ISU1 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTCRAQ6ISU1 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
PTCRAQ6ISU1 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTCRAQ6ISU1 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.67■□□□□ 0.9
PTCRAQ6ISU1 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
PTCRAQ6ISU1 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC20.67■□□□□ 0.9
PTCRAQ6ISU1 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC20.67■□□□□ 0.9
PTCRAQ6ISU1 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC20.67■□□□□ 0.9
PTCRAQ6ISU1 AP000692.2-201ENST00000608391 879 ntBASIC20.67■□□□□ 0.9
PTCRAQ6ISU1 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC20.67■□□□□ 0.9
PTCRAQ6ISU1 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PTCRAQ6ISU1 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTCRAQ6ISU1 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.67■□□□□ 0.9
PTCRAQ6ISU1 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTCRAQ6ISU1 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTCRAQ6ISU1 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
PTCRAQ6ISU1 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
PTCRAQ6ISU1 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms