Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
RNF213Q63HN8 AC087742.1-201ENST00000575880 1738 ntBASIC10.76□□□□□ -0.69
RNF213Q63HN8 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
RNF213Q63HN8 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC10.76□□□□□ -0.69
RNF213Q63HN8 LHX6-205ENST00000464484 666 ntTSL 2 BASIC10.76□□□□□ -0.69
RNF213Q63HN8 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC10.76□□□□□ -0.69
RNF213Q63HN8 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC10.76□□□□□ -0.69
RNF213Q63HN8 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
RNF213Q63HN8 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC10.76□□□□□ -0.69
RNF213Q63HN8 STK25-205ENST00000405883 1904 ntTSL 2 BASIC10.76□□□□□ -0.69
RNF213Q63HN8 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
RNF213Q63HN8 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
RNF213Q63HN8 RPS15-207ENST00000591032 550 ntTSL 3 BASIC10.76□□□□□ -0.69
RNF213Q63HN8 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC10.76□□□□□ -0.69
RNF213Q63HN8 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC10.76□□□□□ -0.69
RNF213Q63HN8 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC10.76□□□□□ -0.69
RNF213Q63HN8 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
RNF213Q63HN8 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
RNF213Q63HN8 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC10.76□□□□□ -0.69
RNF213Q63HN8 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC10.76□□□□□ -0.69
RNF213Q63HN8 C11orf96-202ENST00000528572 1834 ntBASIC10.76□□□□□ -0.69
RNF213Q63HN8 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
RNF213Q63HN8 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
RNF213Q63HN8 AC007663.1-201ENST00000438948 1240 ntBASIC10.75□□□□□ -0.69
RNF213Q63HN8 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
RNF213Q63HN8 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC10.75□□□□□ -0.69
RNF213Q63HN8 SART3-203ENST00000546611 1184 ntBASIC10.75□□□□□ -0.69
RNF213Q63HN8 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC10.75□□□□□ -0.69
RNF213Q63HN8 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC10.75□□□□□ -0.69
RNF213Q63HN8 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
RNF213Q63HN8 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
RNF213Q63HN8 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
RNF213Q63HN8 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
RNF213Q63HN8 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC10.75□□□□□ -0.69
RNF213Q63HN8 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
RNF213Q63HN8 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
RNF213Q63HN8 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC10.75□□□□□ -0.69
RNF213Q63HN8 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
RNF213Q63HN8 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
RNF213Q63HN8 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
RNF213Q63HN8 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
RNF213Q63HN8 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
RNF213Q63HN8 AC097488.1-201ENST00000507834 756 ntBASIC10.75□□□□□ -0.69
RNF213Q63HN8 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC10.75□□□□□ -0.69
RNF213Q63HN8 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC10.75□□□□□ -0.69
RNF213Q63HN8 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
RNF213Q63HN8 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
RNF213Q63HN8 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
RNF213Q63HN8 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
RNF213Q63HN8 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
RNF213Q63HN8 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC10.75□□□□□ -0.69
RNF213Q63HN8 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC10.75□□□□□ -0.69
RNF213Q63HN8 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC10.75□□□□□ -0.69
RNF213Q63HN8 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC10.75□□□□□ -0.69
RNF213Q63HN8 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
RNF213Q63HN8 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
RNF213Q63HN8 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
RNF213Q63HN8 AC092329.2-201ENST00000598402 547 ntBASIC10.74□□□□□ -0.69
RNF213Q63HN8 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC10.74□□□□□ -0.69
RNF213Q63HN8 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
RNF213Q63HN8 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
RNF213Q63HN8 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
RNF213Q63HN8 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
RNF213Q63HN8 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC10.74□□□□□ -0.69
RNF213Q63HN8 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
RNF213Q63HN8 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
RNF213Q63HN8 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
RNF213Q63HN8 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC10.74□□□□□ -0.69
RNF213Q63HN8 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
RNF213Q63HN8 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.69
RNF213Q63HN8 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC10.74□□□□□ -0.69
RNF213Q63HN8 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
RNF213Q63HN8 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
RNF213Q63HN8 TERC-201ENST00000602385 541 ntBASIC10.74□□□□□ -0.69
RNF213Q63HN8 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
RNF213Q63HN8 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
RNF213Q63HN8 KRT18P58-201ENST00000527480 1120 ntBASIC10.74□□□□□ -0.69
RNF213Q63HN8 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC10.74□□□□□ -0.69
RNF213Q63HN8 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC10.74□□□□□ -0.69
RNF213Q63HN8 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
RNF213Q63HN8 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
RNF213Q63HN8 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC10.73□□□□□ -0.69
RNF213Q63HN8 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC10.73□□□□□ -0.69
RNF213Q63HN8 CCR12P-201ENST00000446203 998 ntBASIC10.73□□□□□ -0.69
RNF213Q63HN8 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC10.73□□□□□ -0.69
RNF213Q63HN8 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC10.73□□□□□ -0.69
RNF213Q63HN8 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
RNF213Q63HN8 AC116562.4-202ENST00000641738 218 ntBASIC10.73□□□□□ -0.69
RNF213Q63HN8 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
RNF213Q63HN8 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
RNF213Q63HN8 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC10.73□□□□□ -0.69
RNF213Q63HN8 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
RNF213Q63HN8 LINC01311-201ENST00000565162 1445 ntBASIC10.73□□□□□ -0.69
RNF213Q63HN8 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
RNF213Q63HN8 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC10.73□□□□□ -0.69
RNF213Q63HN8 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
RNF213Q63HN8 FABP5-202ENST00000396359 986 ntTSL 5 BASIC10.73□□□□□ -0.69
RNF213Q63HN8 AC011506.1-201ENST00000474329 610 ntBASIC10.73□□□□□ -0.69
RNF213Q63HN8 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC10.73□□□□□ -0.69
RNF213Q63HN8 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC10.73□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms