Protein–RNA interactions for Protein: Q12428

PDH1, Probable 2-methylcitrate dehydratase, yeastyeast

Known RBP Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PDH1Q12428 YLR342W-AYLR342W-A 174 nt1.06□□□□□ -2.24
PDH1Q12428 BUD3YCL014W 4911 nt1.06□□□□□ -2.24
PDH1Q12428 PMP1YCR024C-A 123 nt1.05□□□□□ -2.24
PDH1Q12428 YEL073CYEL073C 324 nt1.05□□□□□ -2.24
PDH1Q12428 YIL002W-AYIL002W-A 210 nt1.05□□□□□ -2.24
PDH1Q12428 UTP20YBL004W 7482 nt1.05□□□□□ -2.24
PDH1Q12428 COX5BYIL111W 456 nt1.04□□□□□ -2.24
PDH1Q12428 YKL100W-AYKL100W-A 90 nt1.04□□□□□ -2.24
PDH1Q12428 YOR161W-AYOR161W-A 81 nt1.04□□□□□ -2.24
PDH1Q12428 PRP39YML046W 1890 nt1.03□□□□□ -2.24
PDH1Q12428 YLR282CYLR282C 342 nt1.03□□□□□ -2.24
PDH1Q12428 ASE1YOR058C 2658 nt1.02□□□□□ -2.25
PDH1Q12428 YER053C-AYER053C-A 114 nt1.01□□□□□ -2.25
PDH1Q12428 TRS65YGR166W 1683 nt1□□□□□ -2.25
PDH1Q12428 YML002WYML002W 2214 nt1□□□□□ -2.25
PDH1Q12428 EMT1tM(CAU)D 73 nt1□□□□□ -2.25
PDH1Q12428 EMT5tM(CAU)J1 73 nt1□□□□□ -2.25
PDH1Q12428 EMT3tM(CAU)J2 73 nt1□□□□□ -2.25
PDH1Q12428 EMT4tM(CAU)M 73 nt1□□□□□ -2.25
PDH1Q12428 EMT2tM(CAU)O2 73 nt1□□□□□ -2.25
PDH1Q12428 snR190snR190 190 nt1□□□□□ -2.25
PDH1Q12428 SCC2YDR180W 4482 nt1□□□□□ -2.25
PDH1Q12428 YJR029WYJR029W 5268 nt1□□□□□ -2.25
PDH1Q12428 YPR137C-BYPR137C-B 5268 nt1□□□□□ -2.25
PDH1Q12428 BEM2YER155C 6504 nt0.99□□□□□ -2.25
PDH1Q12428 VAM6YDL077C 3150 nt0.99□□□□□ -2.25
PDH1Q12428 UTP8YGR128C 2142 nt0.98□□□□□ -2.25
PDH1Q12428 BFR2YDR299W 1605 nt0.97□□□□□ -2.25
PDH1Q12428 PRP5YBR237W 2550 nt0.97□□□□□ -2.25
PDH1Q12428 YIL142C-AYIL142C-A 333 nt0.97□□□□□ -2.25
PDH1Q12428 YOR381W-AYOR381W-A 168 nt0.97□□□□□ -2.25
PDH1Q12428 SEC8YPR055W 3198 nt0.97□□□□□ -2.25
PDH1Q12428 PRP42YDR235W 1635 nt0.97□□□□□ -2.25
PDH1Q12428 YLR294CYLR294C 330 nt0.96□□□□□ -2.26
PDH1Q12428 YNL338WYNL338W 159 nt0.96□□□□□ -2.26
PDH1Q12428 YLR041WYLR041W 321 nt0.95□□□□□ -2.26
PDH1Q12428 FYV10YIL097W 1551 nt0.95□□□□□ -2.26
PDH1Q12428 YLR399W-AYLR399W-A 105 nt0.94□□□□□ -2.26
PDH1Q12428 DOP1YDR141C 5097 nt0.94□□□□□ -2.26
PDH1Q12428 YOL014WYOL014W 375 nt0.93□□□□□ -2.26
PDH1Q12428 YPR160W-AYPR160W-A 81 nt0.93□□□□□ -2.26
PDH1Q12428 PRP16YKR086W 3216 nt0.92□□□□□ -2.26
PDH1Q12428 YDL073WYDL073W 2955 nt0.91□□□□□ -2.26
PDH1Q12428 YMR160WYMR160W 2451 nt0.9□□□□□ -2.27
PDH1Q12428 YPR117WYPR117W 7470 nt0.9□□□□□ -2.27
PDH1Q12428 YGL182CYGL182C 324 nt0.89□□□□□ -2.27
PDH1Q12428 YBL039C-AYBL039C-A 84 nt0.87□□□□□ -2.27
PDH1Q12428 TAH1YCR060W 336 nt0.86□□□□□ -2.27
PDH1Q12428 tN(GUU)QtN(GUU)Q 71 nt0.86□□□□□ -2.27
PDH1Q12428 YHL015W-AYHL015W-A 84 nt0.86□□□□□ -2.27
PDH1Q12428 YHR131W-AYHR131W-A 246 nt0.86□□□□□ -2.27
PDH1Q12428 YOR170WYOR170W 306 nt0.86□□□□□ -2.27
PDH1Q12428 RKR1YMR247C 4689 nt0.85□□□□□ -2.27
PDH1Q12428 YLR232WYLR232W 348 nt0.85□□□□□ -2.27
PDH1Q12428 SNU13YEL026W 381 nt0.83□□□□□ -2.28
PDH1Q12428 YKL145W-AYKL145W-A 93 nt0.82□□□□□ -2.28
PDH1Q12428 snR48snR48 113 nt0.82□□□□□ -2.28
PDH1Q12428 BEM3YPL115C 3387 nt0.82□□□□□ -2.28
PDH1Q12428 MYO1YHR023W 5787 nt0.82□□□□□ -2.28
PDH1Q12428 YOR102WYOR102W 351 nt0.81□□□□□ -2.28
PDH1Q12428 YSP1YHR155W 3687 nt0.81□□□□□ -2.28
PDH1Q12428 CHS6YJL099W 2241 nt0.8□□□□□ -2.28
PDH1Q12428 OST4YDL232W 111 nt0.8□□□□□ -2.28
PDH1Q12428 YBL053WYBL053W 375 nt0.8□□□□□ -2.28
PDH1Q12428 YDL007C-AYDL007C-A 258 nt0.77□□□□□ -2.29
PDH1Q12428 YDR544CYDR544C 429 nt0.77□□□□□ -2.29
PDH1Q12428 tL(UAA)QtL(UAA)Q 85 nt0.77□□□□□ -2.29
PDH1Q12428 SEC1YDR164C 2175 nt0.77□□□□□ -2.29
PDH1Q12428 LTE1YAL024C 4308 nt0.76□□□□□ -2.29
PDH1Q12428 BIR1YJR089W 2865 nt0.75□□□□□ -2.29
PDH1Q12428 tT(AGU)BtT(AGU)B 73 nt0.75□□□□□ -2.29
PDH1Q12428 tT(AGU)CtT(AGU)C 73 nt0.75□□□□□ -2.29
PDH1Q12428 tT(AGU)DtT(AGU)D 73 nt0.75□□□□□ -2.29
PDH1Q12428 tT(AGU)HtT(AGU)H 73 nt0.75□□□□□ -2.29
PDH1Q12428 tT(AGU)I1tT(AGU)I1 73 nt0.75□□□□□ -2.29
PDH1Q12428 tT(AGU)I2tT(AGU)I2 73 nt0.75□□□□□ -2.29
PDH1Q12428 tT(AGU)JtT(AGU)J 73 nt0.75□□□□□ -2.29
PDH1Q12428 tT(AGU)N1tT(AGU)N1 73 nt0.75□□□□□ -2.29
PDH1Q12428 tT(AGU)N2tT(AGU)N2 73 nt0.75□□□□□ -2.29
PDH1Q12428 tT(AGU)O1tT(AGU)O1 73 nt0.75□□□□□ -2.29
PDH1Q12428 tT(AGU)O2tT(AGU)O2 73 nt0.75□□□□□ -2.29
PDH1Q12428 YOR329W-AYOR329W-A 210 nt0.74□□□□□ -2.29
PDH1Q12428 YPR159C-AYPR159C-A 102 nt0.74□□□□□ -2.29
PDH1Q12428 YJL127W-AYJL127W-A 117 nt0.73□□□□□ -2.29
PDH1Q12428 YOR314W-AYOR314W-A 111 nt0.73□□□□□ -2.29
PDH1Q12428 COG6YNL041C 2520 nt0.73□□□□□ -2.29
PDH1Q12428 tM(CAU)Q2tM(CAU)Q2 78 nt0.72□□□□□ -2.29
PDH1Q12428 YBR072C-AYBR072C-A 162 nt0.72□□□□□ -2.29
PDH1Q12428 RPM2YML091C 3609 nt0.69□□□□□ -2.3
PDH1Q12428 NNF2YGR089W 2811 nt0.68□□□□□ -2.3
PDH1Q12428 SDH6YDR379C-A 240 nt0.68□□□□□ -2.3
PDH1Q12428 GLG1YKR058W 1851 nt0.68□□□□□ -2.3
PDH1Q12428 ULP2YIL031W 3105 nt0.68□□□□□ -2.3
PDH1Q12428 YGR164WYGR164W 336 nt0.67□□□□□ -2.3
PDH1Q12428 snR39BsnR39B 96 nt0.67□□□□□ -2.3
PDH1Q12428 YLL006W-AYLL006W-A 177 nt0.65□□□□□ -2.31
PDH1Q12428 YNL067W-BYNL067W-B 141 nt0.64□□□□□ -2.31
PDH1Q12428 PET111YMR257C 2403 nt0.64□□□□□ -2.31
PDH1Q12428 YDR210WYDR210W 228 nt0.63□□□□□ -2.31
PDH1Q12428 AI1Q0050 2505 nt0.63□□□□□ -2.31
Retrieved 100 of 7,029 protein–RNA pairs in 47 ms