Protein–RNA interactions for Protein: Q05580

HEL2, E3 ubiquitin-protein ligase HEL2, yeastyeast

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HEL2Q05580 YOR161W-AYOR161W-A 81 nt1.13□□□□□ -2.23
HEL2Q05580 KAP120YPL125W 3099 nt1.12□□□□□ -2.23
HEL2Q05580 YER053C-AYER053C-A 114 nt1.11□□□□□ -2.23
HEL2Q05580 EMT1tM(CAU)D 73 nt1.1□□□□□ -2.23
HEL2Q05580 EMT5tM(CAU)J1 73 nt1.1□□□□□ -2.23
HEL2Q05580 EMT3tM(CAU)J2 73 nt1.1□□□□□ -2.23
HEL2Q05580 EMT4tM(CAU)M 73 nt1.1□□□□□ -2.23
HEL2Q05580 EMT2tM(CAU)O2 73 nt1.1□□□□□ -2.23
HEL2Q05580 YAL067W-AYAL067W-A 228 nt1.1□□□□□ -2.23
HEL2Q05580 PRP16YKR086W 3216 nt1.09□□□□□ -2.23
HEL2Q05580 Q0092Q0092 141 nt1.09□□□□□ -2.23
HEL2Q05580 YOR381W-AYOR381W-A 168 nt1.08□□□□□ -2.24
HEL2Q05580 tF(GAA)BtF(GAA)B 73 nt1.07□□□□□ -2.24
HEL2Q05580 tF(GAA)FtF(GAA)F 73 nt1.07□□□□□ -2.24
HEL2Q05580 tF(GAA)GtF(GAA)G 73 nt1.07□□□□□ -2.24
HEL2Q05580 tF(GAA)H1tF(GAA)H1 73 nt1.07□□□□□ -2.24
HEL2Q05580 tF(GAA)H2tF(GAA)H2 73 nt1.07□□□□□ -2.24
HEL2Q05580 tF(GAA)MtF(GAA)M 73 nt1.07□□□□□ -2.24
HEL2Q05580 tF(GAA)P1tF(GAA)P1 73 nt1.07□□□□□ -2.24
HEL2Q05580 tF(GAA)P2tF(GAA)P2 73 nt1.07□□□□□ -2.24
HEL2Q05580 CMC4YMR194C-B 222 nt1.07□□□□□ -2.24
HEL2Q05580 WAR1YML076C 2835 nt1.07□□□□□ -2.24
HEL2Q05580 UBP3YER151C 2739 nt1.05□□□□□ -2.24
HEL2Q05580 ATP8Q0080 147 nt1.05□□□□□ -2.24
HEL2Q05580 YIL002W-AYIL002W-A 210 nt1.05□□□□□ -2.24
HEL2Q05580 YEL073CYEL073C 324 nt1.04□□□□□ -2.24
HEL2Q05580 YGL123C-AYGL123C-A 231 nt1.03□□□□□ -2.24
HEL2Q05580 BEM2YER155C 6504 nt1.03□□□□□ -2.24
HEL2Q05580 NOP9YJL010C 2001 nt1.03□□□□□ -2.25
HEL2Q05580 PRP42YDR235W 1635 nt1.02□□□□□ -2.25
HEL2Q05580 YDL073WYDL073W 2955 nt1.02□□□□□ -2.25
HEL2Q05580 YLR282CYLR282C 342 nt1.01□□□□□ -2.25
HEL2Q05580 SMC1YFL008W 3678 nt1.01□□□□□ -2.25
HEL2Q05580 BFR2YDR299W 1605 nt1□□□□□ -2.25
HEL2Q05580 RKR1YMR247C 4689 nt0.99□□□□□ -2.25
HEL2Q05580 YNL170WYNL170W 396 nt0.99□□□□□ -2.25
HEL2Q05580 tL(UAA)QtL(UAA)Q 85 nt0.98□□□□□ -2.25
HEL2Q05580 YOR170WYOR170W 306 nt0.97□□□□□ -2.25
HEL2Q05580 PRP5YBR237W 2550 nt0.96□□□□□ -2.26
HEL2Q05580 snR190snR190 190 nt0.96□□□□□ -2.26
HEL2Q05580 SDH6YDR379C-A 240 nt0.95□□□□□ -2.26
HEL2Q05580 YGR164WYGR164W 336 nt0.95□□□□□ -2.26
HEL2Q05580 COX5BYIL111W 456 nt0.95□□□□□ -2.26
HEL2Q05580 YBL039C-AYBL039C-A 84 nt0.95□□□□□ -2.26
HEL2Q05580 FYV10YIL097W 1551 nt0.95□□□□□ -2.26
HEL2Q05580 YGL182CYGL182C 324 nt0.94□□□□□ -2.26
HEL2Q05580 tN(GUU)QtN(GUU)Q 71 nt0.94□□□□□ -2.26
HEL2Q05580 YLR041WYLR041W 321 nt0.94□□□□□ -2.26
HEL2Q05580 YIL142C-AYIL142C-A 333 nt0.93□□□□□ -2.26
HEL2Q05580 YOR102WYOR102W 351 nt0.93□□□□□ -2.26
HEL2Q05580 TAH1YCR060W 336 nt0.92□□□□□ -2.26
HEL2Q05580 YDR544CYDR544C 429 nt0.92□□□□□ -2.26
HEL2Q05580 YOL014WYOL014W 375 nt0.92□□□□□ -2.26
HEL2Q05580 snR39BsnR39B 96 nt0.92□□□□□ -2.26
HEL2Q05580 YHL015W-AYHL015W-A 84 nt0.9□□□□□ -2.27
HEL2Q05580 YOR329W-AYOR329W-A 210 nt0.9□□□□□ -2.27
HEL2Q05580 snR48snR48 113 nt0.9□□□□□ -2.27
HEL2Q05580 YML002WYML002W 2214 nt0.89□□□□□ -2.27
HEL2Q05580 RPL26BYGR034W 384 nt0.89□□□□□ -2.27
HEL2Q05580 CHS6YJL099W 2241 nt0.88□□□□□ -2.27
HEL2Q05580 YIL071W-AYIL071W-A 477 nt0.88□□□□□ -2.27
HEL2Q05580 YPR160W-AYPR160W-A 81 nt0.86□□□□□ -2.27
HEL2Q05580 UTP8YGR128C 2142 nt0.86□□□□□ -2.27
HEL2Q05580 COG6YNL041C 2520 nt0.85□□□□□ -2.27
HEL2Q05580 SEC8YPR055W 3198 nt0.85□□□□□ -2.27
HEL2Q05580 YHR131W-AYHR131W-A 246 nt0.84□□□□□ -2.27
HEL2Q05580 YCL001W-BYCL001W-B 255 nt0.84□□□□□ -2.27
HEL2Q05580 UTP20YBL004W 7482 nt0.84□□□□□ -2.28
HEL2Q05580 YOR314W-AYOR314W-A 111 nt0.83□□□□□ -2.28
HEL2Q05580 LTE1YAL024C 4308 nt0.82□□□□□ -2.28
HEL2Q05580 SEC1YDR164C 2175 nt0.82□□□□□ -2.28
HEL2Q05580 YKL145W-AYKL145W-A 93 nt0.82□□□□□ -2.28
HEL2Q05580 YPR159C-AYPR159C-A 102 nt0.82□□□□□ -2.28
HEL2Q05580 YKL100W-AYKL100W-A 90 nt0.81□□□□□ -2.28
HEL2Q05580 YLR399W-AYLR399W-A 105 nt0.81□□□□□ -2.28
HEL2Q05580 SNU13YEL026W 381 nt0.8□□□□□ -2.28
HEL2Q05580 YLR232WYLR232W 348 nt0.8□□□□□ -2.28
HEL2Q05580 YMR160WYMR160W 2451 nt0.8□□□□□ -2.28
HEL2Q05580 YSP1YHR155W 3687 nt0.78□□□□□ -2.28
HEL2Q05580 YOR192C-BYOR192C-B 5313 nt0.78□□□□□ -2.28
HEL2Q05580 YDR210WYDR210W 228 nt0.78□□□□□ -2.28
HEL2Q05580 YNL054W-BYNL054W-B 5250 nt0.77□□□□□ -2.29
HEL2Q05580 OST4YDL232W 111 nt0.77□□□□□ -2.29
HEL2Q05580 RPM2YML091C 3609 nt0.76□□□□□ -2.29
HEL2Q05580 YNL067W-BYNL067W-B 141 nt0.76□□□□□ -2.29
HEL2Q05580 Q0143Q0143 153 nt0.74□□□□□ -2.29
HEL2Q05580 RCO1YMR075W 2055 nt0.73□□□□□ -2.29
HEL2Q05580 tT(AGU)BtT(AGU)B 73 nt0.73□□□□□ -2.29
HEL2Q05580 tT(AGU)CtT(AGU)C 73 nt0.73□□□□□ -2.29
HEL2Q05580 tT(AGU)DtT(AGU)D 73 nt0.73□□□□□ -2.29
HEL2Q05580 tT(AGU)HtT(AGU)H 73 nt0.73□□□□□ -2.29
HEL2Q05580 tT(AGU)I1tT(AGU)I1 73 nt0.73□□□□□ -2.29
HEL2Q05580 tT(AGU)I2tT(AGU)I2 73 nt0.73□□□□□ -2.29
HEL2Q05580 tT(AGU)JtT(AGU)J 73 nt0.73□□□□□ -2.29
HEL2Q05580 tT(AGU)N1tT(AGU)N1 73 nt0.73□□□□□ -2.29
HEL2Q05580 tT(AGU)N2tT(AGU)N2 73 nt0.73□□□□□ -2.29
HEL2Q05580 tT(AGU)O1tT(AGU)O1 73 nt0.73□□□□□ -2.29
HEL2Q05580 tT(AGU)O2tT(AGU)O2 73 nt0.73□□□□□ -2.29
HEL2Q05580 YPL060C-AYPL060C-A 3315 nt0.72□□□□□ -2.29
HEL2Q05580 BEM3YPL115C 3387 nt0.72□□□□□ -2.29
Retrieved 100 of 7,029 protein–RNA pairs in 45.6 ms