Protein–RNA interactions for Protein: Q04781

RKR1, E3 ubiquitin-protein ligase listerin, yeastyeast

Predictions only

Length 1,562 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RKR1Q04781 CSE2YNR010W 450 nt-3.57□□□□□ -2.98
RKR1Q04781 YOR309CYOR309C 381 nt-3.58□□□□□ -2.98
RKR1Q04781 RPS27BYHR021C 249 nt-3.59□□□□□ -2.98
RKR1Q04781 YJR087WYJR087W 351 nt-3.59□□□□□ -2.98
RKR1Q04781 YLR334CYLR334C 381 nt-3.6□□□□□ -2.99
RKR1Q04781 YDR354C-AYDR354C-A 144 nt-3.63□□□□□ -2.99
RKR1Q04781 YGL230CYGL230C 444 nt-3.63□□□□□ -2.99
RKR1Q04781 YCR001WYCR001W 315 nt-3.64□□□□□ -2.99
RKR1Q04781 YLR456WYLR456W 615 nt-3.68□□□□□ -3
RKR1Q04781 YMR193C-AYMR193C-A 387 nt-3.68□□□□□ -3
RKR1Q04781 BI2Q0110 1272 nt-3.7□□□□□ -3
RKR1Q04781 YLR202CYLR202C 327 nt-3.7□□□□□ -3
RKR1Q04781 RPS30AYLR287C-A 192 nt-3.7□□□□□ -3
RKR1Q04781 YNL146C-AYNL146C-A 195 nt-3.71□□□□□ -3
RKR1Q04781 YNL303WYNL303W 348 nt-3.71□□□□□ -3
RKR1Q04781 YKL083WYKL083W 615 nt-3.72□□□□□ -3
RKR1Q04781 YER090C-AYER090C-A 90 nt-3.72□□□□□ -3.01
RKR1Q04781 YNL171CYNL171C 369 nt-3.72□□□□□ -3.01
RKR1Q04781 BUD26YDR241W 288 nt-3.73□□□□□ -3.01
RKR1Q04781 tQ(UUG)QtQ(UUG)Q 76 nt-3.73□□□□□ -3.01
RKR1Q04781 YHR007C-AYHR007C-A 216 nt-3.74□□□□□ -3.01
RKR1Q04781 YDR220CYDR220C 294 nt-3.76□□□□□ -3.01
RKR1Q04781 YML054C-AYML054C-A 159 nt-3.77□□□□□ -3.01
RKR1Q04781 YFL012WYFL012W 447 nt-3.79□□□□□ -3.02
RKR1Q04781 YAF9YNL107W 681 nt-3.8□□□□□ -3.02
RKR1Q04781 YMR172C-AYMR172C-A 384 nt-3.81□□□□□ -3.02
RKR1Q04781 YOL083C-AYOL083C-A 141 nt-3.81□□□□□ -3.02
RKR1Q04781 YDR048CYDR048C 315 nt-3.82□□□□□ -3.02
RKR1Q04781 YMR013C-AYMR013C-A 150 nt-3.82□□□□□ -3.02
RKR1Q04781 YEL020C-BYEL020C-B 198 nt-3.84□□□□□ -3.02
RKR1Q04781 YNL266WYNL266W 420 nt-3.84□□□□□ -3.02
RKR1Q04781 YPR039WYPR039W 336 nt-3.84□□□□□ -3.02
RKR1Q04781 MRPL32YCR003W 552 nt-3.85□□□□□ -3.03
RKR1Q04781 YHR050W-AYHR050W-A 171 nt-3.86□□□□□ -3.03
RKR1Q04781 YPR002C-AYPR002C-A 198 nt-3.86□□□□□ -3.03
RKR1Q04781 PRM3YPL192C 402 nt-3.89□□□□□ -3.03
RKR1Q04781 IRC13YOR235W 315 nt-3.92□□□□□ -3.04
RKR1Q04781 YDR524C-AYDR524C-A 120 nt-3.94□□□□□ -3.04
RKR1Q04781 YDR524W-CYDR524W-C 90 nt-3.97□□□□□ -3.04
RKR1Q04781 YGR270C-AYGR270C-A 219 nt-3.98□□□□□ -3.05
RKR1Q04781 snR50snR50 90 nt-3.98□□□□□ -3.05
RKR1Q04781 YDR426CYDR426C 378 nt-4.01□□□□□ -3.05
RKR1Q04781 GPI15YNL038W 690 nt-4.01□□□□□ -3.05
RKR1Q04781 POP6YGR030C 477 nt-4.03□□□□□ -3.05
RKR1Q04781 TOM22YNL131W 459 nt-4.05□□□□□ -3.06
RKR1Q04781 YDL011CYDL011C 324 nt-4.07□□□□□ -3.06
RKR1Q04781 YDR544CYDR544C 429 nt-4.14□□□□□ -3.07
RKR1Q04781 YLR269CYLR269C 351 nt-4.14□□□□□ -3.07
RKR1Q04781 snR67snR67 82 nt-4.2□□□□□ -3.08
RKR1Q04781 YGR069WYGR069W 336 nt-4.24□□□□□ -3.09
RKR1Q04781 YLR163W-AYLR163W-A 114 nt-4.24□□□□□ -3.09
RKR1Q04781 YOR314W-AYOR314W-A 111 nt-4.25□□□□□ -3.09
RKR1Q04781 snR69snR69 101 nt-4.28□□□□□ -3.09
RKR1Q04781 YOR008C-AYOR008C-A 225 nt-4.34□□□□□ -3.1
RKR1Q04781 YLR217WYLR217W 324 nt-4.4□□□□□ -3.11
RKR1Q04781 YML099W-AYML099W-A 330 nt-4.4□□□□□ -3.11
RKR1Q04781 TSC3YBR058C-A 243 nt-4.4□□□□□ -3.11
RKR1Q04781 YLR342W-AYLR342W-A 174 nt-4.4□□□□□ -3.11
RKR1Q04781 PCC1YKR095W-A 267 nt-4.45□□□□□ -3.12
RKR1Q04781 YBL071CYBL071C 309 nt-4.46□□□□□ -3.12
RKR1Q04781 YBR182C-AYBR182C-A 195 nt-4.46□□□□□ -3.12
RKR1Q04781 YGL149WYGL149W 306 nt-4.48□□□□□ -3.13
RKR1Q04781 snR57snR57 88 nt-4.49□□□□□ -3.13
RKR1Q04781 YDR102CYDR102C 333 nt-4.49□□□□□ -3.13
RKR1Q04781 YLL019W-AYLL019W-A 93 nt-4.53□□□□□ -3.13
RKR1Q04781 snR9snR9 187 nt-4.54□□□□□ -3.14
RKR1Q04781 HMRA1YCR097W 381 nt-4.61□□□□□ -3.15
RKR1Q04781 YNL198CYNL198C 303 nt-4.62□□□□□ -3.15
RKR1Q04781 YER175W-AYER175W-A 165 nt-4.64□□□□□ -3.15
RKR1Q04781 STE18YJR086W 333 nt-4.64□□□□□ -3.15
RKR1Q04781 YER137W-AYER137W-A 306 nt-4.65□□□□□ -3.15
RKR1Q04781 YOR376W-AYOR376W-A 156 nt-4.65□□□□□ -3.15
RKR1Q04781 YJL197C-AYJL197C-A 282 nt-4.66□□□□□ -3.16
RKR1Q04781 YGR174W-AYGR174W-A 87 nt-4.67□□□□□ -3.16
RKR1Q04781 YDL158CYDL158C 309 nt-4.7□□□□□ -3.16
RKR1Q04781 AI5_BETAQ0075 1065 nt-4.7□□□□□ -3.16
RKR1Q04781 BIL1YOR304C-A 231 nt-4.79□□□□□ -3.18
RKR1Q04781 YER097WYER097W 330 nt-4.82□□□□□ -3.18
RKR1Q04781 YLR286W-AYLR286W-A 135 nt-4.84□□□□□ -3.18
RKR1Q04781 ATG16YMR159C 453 nt-4.84□□□□□ -3.18
RKR1Q04781 YOL038C-AYOL038C-A 96 nt-4.86□□□□□ -3.19
RKR1Q04781 tD(GUC)QtD(GUC)Q 75 nt-4.87□□□□□ -3.19
RKR1Q04781 YDL016CYDL016C 303 nt-4.87□□□□□ -3.19
RKR1Q04781 YER181CYER181C 324 nt-4.9□□□□□ -3.19
RKR1Q04781 YOR316C-AYOR316C-A 210 nt-4.91□□□□□ -3.19
RKR1Q04781 YPR197CYPR197C 564 nt-4.91□□□□□ -3.19
RKR1Q04781 YIL115W-AYIL115W-A 372 nt-4.95□□□□□ -3.2
RKR1Q04781 YAR047CYAR047C 321 nt-4.99□□□□□ -3.21
RKR1Q04781 YBR196C-AYBR196C-A 150 nt-4.99□□□□□ -3.21
RKR1Q04781 YDL159C-BYDL159C-B 177 nt-5.02□□□□□ -3.21
RKR1Q04781 YOR072W-BYOR072W-B 162 nt-5.03□□□□□ -3.21
RKR1Q04781 YGR146C-AYGR146C-A 162 nt-5.04□□□□□ -3.22
RKR1Q04781 snR55snR55 98 nt-5.09□□□□□ -3.22
RKR1Q04781 snR6snR6 112 nt-5.11□□□□□ -3.23
RKR1Q04781 YOL155W-AYOL155W-A 135 nt-5.12□□□□□ -3.23
RKR1Q04781 YFL019CYFL019C 354 nt-5.22□□□□□ -3.25
RKR1Q04781 YFL032WYFL032W 321 nt-5.23□□□□□ -3.25
RKR1Q04781 YBR178WYBR178W 375 nt-5.25□□□□□ -3.25
RKR1Q04781 CSN9YDR179C 489 nt-5.28□□□□□ -3.25
RKR1Q04781 MPC1YGL080W 393 nt-5.28□□□□□ -3.25
Retrieved 100 of 7,029 protein–RNA pairs in 72 ms