Protein–RNA interactions for Protein: Q04487

SHH3, Mitochondrial inner membrane protein SHH3, yeastyeast

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHH3Q04487 YOR121CYOR121C 306 nt-0.39□□□□□ -2.47
SHH3Q04487 YGR069WYGR069W 336 nt-0.4□□□□□ -2.47
SHH3Q04487 YMR001C-AYMR001C-A 231 nt-0.4□□□□□ -2.47
SHH3Q04487 YJL197C-AYJL197C-A 282 nt-0.42□□□□□ -2.48
SHH3Q04487 YLL019W-AYLL019W-A 93 nt-0.42□□□□□ -2.48
SHH3Q04487 SBH2YER019C-A 267 nt-0.43□□□□□ -2.48
SHH3Q04487 YGR164WYGR164W 336 nt-0.43□□□□□ -2.48
SHH3Q04487 EST1YLR233C 2100 nt-0.43□□□□□ -2.48
SHH3Q04487 PRP39YML046W 1890 nt-0.44□□□□□ -2.48
SHH3Q04487 YPR016W-AYPR016W-A 261 nt-0.44□□□□□ -2.48
SHH3Q04487 CSE1YGL238W 2883 nt-0.44□□□□□ -2.48
SHH3Q04487 YER053C-AYER053C-A 114 nt-0.45□□□□□ -2.48
SHH3Q04487 AGA2YGL032C 264 nt-0.45□□□□□ -2.48
SHH3Q04487 RAD61YDR014W 1944 nt-0.46□□□□□ -2.48
SHH3Q04487 GLG1YKR058W 1851 nt-0.47□□□□□ -2.48
SHH3Q04487 YMR193C-AYMR193C-A 387 nt-0.48□□□□□ -2.49
SHH3Q04487 SEC10YLR166C 2616 nt-0.49□□□□□ -2.49
SHH3Q04487 snR60snR60 104 nt-0.49□□□□□ -2.49
SHH3Q04487 SDH6YDR379C-A 240 nt-0.49□□□□□ -2.49
SHH3Q04487 BIL1YOR304C-A 231 nt-0.49□□□□□ -2.49
SHH3Q04487 snR46snR46 197 nt-0.49□□□□□ -2.49
SHH3Q04487 YJR157WYJR157W 363 nt-0.54□□□□□ -2.5
SHH3Q04487 YNL324WYNL324W 396 nt-0.54□□□□□ -2.5
SHH3Q04487 URB1YKL014C 5295 nt-0.55□□□□□ -2.5
SHH3Q04487 HMRA1YCR097W 381 nt-0.56□□□□□ -2.5
SHH3Q04487 YGR035CYGR035C 351 nt-0.56□□□□□ -2.5
SHH3Q04487 YAL068W-AYAL068W-A 255 nt-0.56□□□□□ -2.5
SHH3Q04487 YOR072W-BYOR072W-B 162 nt-0.56□□□□□ -2.5
SHH3Q04487 YIL002W-AYIL002W-A 210 nt-0.57□□□□□ -2.5
SHH3Q04487 APQ12YIL040W 417 nt-0.57□□□□□ -2.5
SHH3Q04487 YLR264C-AYLR264C-A 117 nt-0.57□□□□□ -2.5
SHH3Q04487 YIL032CYIL032C 357 nt-0.58□□□□□ -2.5
SHH3Q04487 HTL1YCR020W-B 237 nt-0.59□□□□□ -2.5
SHH3Q04487 YOR293C-AYOR293C-A 150 nt-0.59□□□□□ -2.5
SHH3Q04487 YIR030W-AYIR030W-A 384 nt-0.6□□□□□ -2.51
SHH3Q04487 YOR015WYOR015W 360 nt-0.6□□□□□ -2.51
SHH3Q04487 YPR170W-AYPR170W-A 186 nt-0.6□□□□□ -2.51
SHH3Q04487 YCR038W-AYCR038W-A 126 nt-0.61□□□□□ -2.51
SHH3Q04487 YDR544CYDR544C 429 nt-0.62□□□□□ -2.51
SHH3Q04487 YAL063C-AYAL063C-A 291 nt-0.63□□□□□ -2.51
SHH3Q04487 YNL028WYNL028W 318 nt-0.63□□□□□ -2.51
SHH3Q04487 TAH1YCR060W 336 nt-0.64□□□□□ -2.51
SHH3Q04487 snR36snR36 182 nt-0.64□□□□□ -2.51
SHH3Q04487 UTP8YGR128C 2142 nt-0.64□□□□□ -2.51
SHH3Q04487 COG6YNL041C 2520 nt-0.65□□□□□ -2.51
SHH3Q04487 YDL007C-AYDL007C-A 258 nt-0.66□□□□□ -2.52
SHH3Q04487 snR74snR74 88 nt-0.66□□□□□ -2.52
SHH3Q04487 YLR120W-AYLR120W-A 102 nt-0.67□□□□□ -2.52
SHH3Q04487 YNL067W-BYNL067W-B 141 nt-0.67□□□□□ -2.52
SHH3Q04487 YIL071W-AYIL071W-A 477 nt-0.68□□□□□ -2.52
SHH3Q04487 YGL149WYGL149W 306 nt-0.7□□□□□ -2.52
SHH3Q04487 YAF9YNL107W 681 nt-0.7□□□□□ -2.52
SHH3Q04487 YLR154W-FYLR154W-F 141 nt-0.71□□□□□ -2.52
SHH3Q04487 YML100W-AYML100W-A 174 nt-0.71□□□□□ -2.52
SHH3Q04487 YDR102CYDR102C 333 nt-0.72□□□□□ -2.52
SHH3Q04487 ATP6Q0085 780 nt-0.72□□□□□ -2.52
SHH3Q04487 YPL060C-AYPL060C-A 3315 nt-0.73□□□□□ -2.53
SHH3Q04487 tA(UGC)QtA(UGC)Q 76 nt-0.74□□□□□ -2.53
SHH3Q04487 RPM2YML091C 3609 nt-0.75□□□□□ -2.53
SHH3Q04487 YBL039C-AYBL039C-A 84 nt-0.75□□□□□ -2.53
SHH3Q04487 Q0017Q0017 162 nt-0.75□□□□□ -2.53
SHH3Q04487 YML099W-AYML099W-A 330 nt-0.76□□□□□ -2.53
SHH3Q04487 YOR314W-AYOR314W-A 111 nt-0.77□□□□□ -2.53
SHH3Q04487 YDR183C-AYDR183C-A 258 nt-0.78□□□□□ -2.53
SHH3Q04487 YGL052WYGL052W 306 nt-0.8□□□□□ -2.54
SHH3Q04487 YMR172C-AYMR172C-A 384 nt-0.8□□□□□ -2.54
SHH3Q04487 PAU9YBL108C-A 129 nt-0.82□□□□□ -2.54
SHH3Q04487 YJL113WYJL113W 4647 nt-0.83□□□□□ -2.54
SHH3Q04487 tT(UGU)G1tT(UGU)G1 72 nt-0.83□□□□□ -2.54
SHH3Q04487 tT(UGU)G2tT(UGU)G2 72 nt-0.83□□□□□ -2.54
SHH3Q04487 tT(UGU)PtT(UGU)P 72 nt-0.83□□□□□ -2.54
SHH3Q04487 YDR157WYDR157W 402 nt-0.86□□□□□ -2.55
SHH3Q04487 YGL182CYGL182C 324 nt-0.86□□□□□ -2.55
SHH3Q04487 YJL077W-AYJL077W-A 87 nt-0.86□□□□□ -2.55
SHH3Q04487 YLR222C-AYLR222C-A 231 nt-0.86□□□□□ -2.55
SHH3Q04487 YFL032WYFL032W 321 nt-0.88□□□□□ -2.55
SHH3Q04487 snR33snR33 183 nt-0.88□□□□□ -2.55
SHH3Q04487 YPL038W-AYPL038W-A 192 nt-0.9□□□□□ -2.55
SHH3Q04487 YGL041CYGL041C 204 nt-0.91□□□□□ -2.56
SHH3Q04487 tQ(UUG)QtQ(UUG)Q 76 nt-0.93□□□□□ -2.56
SHH3Q04487 YOR170WYOR170W 306 nt-0.93□□□□□ -2.56
SHH3Q04487 YPR197CYPR197C 564 nt-0.93□□□□□ -2.56
SHH3Q04487 snR69snR69 101 nt-0.94□□□□□ -2.56
SHH3Q04487 YJL182CYJL182C 318 nt-0.94□□□□□ -2.56
SHH3Q04487 YPR010C-AYPR010C-A 219 nt-0.94□□□□□ -2.56
SHH3Q04487 YBR182C-AYBR182C-A 195 nt-0.94□□□□□ -2.56
SHH3Q04487 YHL009W-BYHL009W-B 5409 nt-0.95□□□□□ -2.56
SHH3Q04487 YDR118W-AYDR118W-A 117 nt-0.97□□□□□ -2.56
SHH3Q04487 YOR008C-AYOR008C-A 225 nt-0.97□□□□□ -2.56
SHH3Q04487 snR49snR49 165 nt-0.99□□□□□ -2.57
SHH3Q04487 YEL014CYEL014C 306 nt-1□□□□□ -2.57
SHH3Q04487 VAR1Q0140 1197 nt-1.02□□□□□ -2.57
SHH3Q04487 YOR381W-AYOR381W-A 168 nt-1.02□□□□□ -2.57
SHH3Q04487 snR161snR161 161 nt-1.02□□□□□ -2.57
SHH3Q04487 YDR413CYDR413C 576 nt-1.03□□□□□ -2.57
SHH3Q04487 tF(GAA)QtF(GAA)Q 75 nt-1.03□□□□□ -2.57
SHH3Q04487 YER090C-AYER090C-A 90 nt-1.03□□□□□ -2.57
SHH3Q04487 YER097WYER097W 330 nt-1.03□□□□□ -2.57
SHH3Q04487 YNL266WYNL266W 420 nt-1.03□□□□□ -2.57
SHH3Q04487 snR50snR50 90 nt-1.03□□□□□ -2.57
Retrieved 100 of 7,029 protein–RNA pairs in 20.7 ms