Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.15■□□□□ 0.34
AP3S2P59780 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.15■□□□□ 0.34
AP3S2P59780 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.15■□□□□ 0.34
AP3S2P59780 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP3S2P59780 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP3S2P59780 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC17.15■□□□□ 0.34
AP3S2P59780 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC17.15■□□□□ 0.34
AP3S2P59780 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
AP3S2P59780 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
AP3S2P59780 BRD4-212ENST00000630599 726 ntTSL 2 BASIC17.15■□□□□ 0.34
AP3S2P59780 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
AP3S2P59780 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.15■□□□□ 0.34
AP3S2P59780 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
AP3S2P59780 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
AP3S2P59780 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
AP3S2P59780 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
AP3S2P59780 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.15■□□□□ 0.34
AP3S2P59780 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP3S2P59780 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.15■□□□□ 0.34
AP3S2P59780 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.15■□□□□ 0.34
AP3S2P59780 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.14■□□□□ 0.33
AP3S2P59780 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP3S2P59780 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP3S2P59780 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.14■□□□□ 0.33
AP3S2P59780 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP3S2P59780 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP3S2P59780 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP3S2P59780 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
AP3S2P59780 HES6-206ENST00000409574 738 ntTSL 2 BASIC17.14■□□□□ 0.33
AP3S2P59780 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC17.14■□□□□ 0.33
AP3S2P59780 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC17.14■□□□□ 0.33
AP3S2P59780 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC17.14■□□□□ 0.33
AP3S2P59780 AL033527.3-201ENST00000566366 1196 ntBASIC17.14■□□□□ 0.33
AP3S2P59780 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP3S2P59780 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP3S2P59780 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
AP3S2P59780 BX119927.1-201ENST00000636596 1552 ntBASIC17.14■□□□□ 0.33
AP3S2P59780 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP3S2P59780 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP3S2P59780 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP3S2P59780 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP3S2P59780 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP3S2P59780 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP3S2P59780 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP3S2P59780 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP3S2P59780 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP3S2P59780 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP3S2P59780 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
AP3S2P59780 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC17.13■□□□□ 0.33
AP3S2P59780 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP3S2P59780 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP3S2P59780 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
AP3S2P59780 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
AP3S2P59780 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC17.13■□□□□ 0.33
AP3S2P59780 AL138724.1-201ENST00000606771 1088 ntBASIC17.13■□□□□ 0.33
AP3S2P59780 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC17.13■□□□□ 0.33
AP3S2P59780 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
AP3S2P59780 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.13■□□□□ 0.33
AP3S2P59780 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP3S2P59780 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.13■□□□□ 0.33
AP3S2P59780 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
AP3S2P59780 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP3S2P59780 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP3S2P59780 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP3S2P59780 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP3S2P59780 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP3S2P59780 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.13■□□□□ 0.33
AP3S2P59780 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.13■□□□□ 0.33
AP3S2P59780 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP3S2P59780 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
AP3S2P59780 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP3S2P59780 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.13■□□□□ 0.33
AP3S2P59780 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP3S2P59780 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.13■□□□□ 0.33
AP3S2P59780 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP3S2P59780 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP3S2P59780 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.12■□□□□ 0.33
AP3S2P59780 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
AP3S2P59780 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.12■□□□□ 0.33
AP3S2P59780 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP3S2P59780 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.12■□□□□ 0.33
AP3S2P59780 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
AP3S2P59780 HTR7P1-202ENST00000624664 4411 ntBASIC17.12■□□□□ 0.33
AP3S2P59780 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP3S2P59780 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP3S2P59780 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
AP3S2P59780 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
AP3S2P59780 SRD5A1P1-201ENST00000442297 786 ntBASIC17.12■□□□□ 0.33
AP3S2P59780 AC012354.3-201ENST00000623734 483 ntBASIC17.12■□□□□ 0.33
AP3S2P59780 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.12■□□□□ 0.33
AP3S2P59780 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP3S2P59780 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.12■□□□□ 0.33
AP3S2P59780 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
AP3S2P59780 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.12■□□□□ 0.33
AP3S2P59780 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP3S2P59780 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP3S2P59780 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
AP3S2P59780 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.12■□□□□ 0.33
AP3S2P59780 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
AP3S2P59780 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms