Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 YBX1P10-201ENST00000444752 975 ntBASIC28.81■■■□□ 2.2
CLTCL1P53675 KSR1P1-201ENST00000446298 240 ntBASIC28.81■■■□□ 2.2
CLTCL1P53675 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC28.81■■■□□ 2.2
CLTCL1P53675 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC28.81■■■□□ 2.2
CLTCL1P53675 FP700111.2-201ENST00000619190 1892 ntBASIC28.81■■■□□ 2.2
CLTCL1P53675 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC28.81■■■□□ 2.2
CLTCL1P53675 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC28.8■■■□□ 2.2
CLTCL1P53675 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC28.8■■■□□ 2.2
CLTCL1P53675 UNC93B2-201ENST00000285383 730 ntBASIC28.8■■■□□ 2.2
CLTCL1P53675 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
CLTCL1P53675 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC28.8■■■□□ 2.2
CLTCL1P53675 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC28.8■■■□□ 2.2
CLTCL1P53675 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC28.8■■■□□ 2.2
CLTCL1P53675 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
CLTCL1P53675 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
CLTCL1P53675 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC28.8■■■□□ 2.2
CLTCL1P53675 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
CLTCL1P53675 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC28.8■■■□□ 2.2
CLTCL1P53675 MMP23A-201ENST00000234610 1017 ntBASIC28.8■■■□□ 2.2
CLTCL1P53675 TK2-213ENST00000563369 882 ntTSL 5 BASIC28.8■■■□□ 2.2
CLTCL1P53675 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC28.8■■■□□ 2.2
CLTCL1P53675 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC28.79■■■□□ 2.2
CLTCL1P53675 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC28.79■■■□□ 2.2
CLTCL1P53675 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
CLTCL1P53675 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC28.79■■■□□ 2.2
CLTCL1P53675 MESTP1-201ENST00000404287 994 ntBASIC28.79■■■□□ 2.2
CLTCL1P53675 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC28.79■■■□□ 2.2
CLTCL1P53675 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC28.79■■■□□ 2.2
CLTCL1P53675 AC116351.2-201ENST00000606540 1585 ntBASIC28.79■■■□□ 2.2
CLTCL1P53675 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
CLTCL1P53675 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
CLTCL1P53675 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC28.78■■■□□ 2.2
CLTCL1P53675 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
CLTCL1P53675 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
CLTCL1P53675 ABBA01031674.1-201ENST00000635145 728 ntBASIC28.78■■■□□ 2.2
CLTCL1P53675 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC28.78■■■□□ 2.2
CLTCL1P53675 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
CLTCL1P53675 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC28.77■■■□□ 2.2
CLTCL1P53675 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC28.77■■■□□ 2.2
CLTCL1P53675 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
CLTCL1P53675 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
CLTCL1P53675 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC28.77■■■□□ 2.2
CLTCL1P53675 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC28.77■■■□□ 2.2
CLTCL1P53675 DUT-205ENST00000558813 769 ntTSL 2 BASIC28.77■■■□□ 2.2
CLTCL1P53675 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC28.77■■■□□ 2.2
CLTCL1P53675 AC026310.3-201ENST00000625186 2373 ntBASIC28.77■■■□□ 2.2
CLTCL1P53675 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.2
CLTCL1P53675 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.2
CLTCL1P53675 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC28.76■■■□□ 2.2
CLTCL1P53675 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC28.76■■■□□ 2.2
CLTCL1P53675 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC28.76■■■□□ 2.2
CLTCL1P53675 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC28.76■■■□□ 2.2
CLTCL1P53675 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC28.76■■■□□ 2.2
CLTCL1P53675 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC28.76■■■□□ 2.2
CLTCL1P53675 AC026271.3-201ENST00000571884 352 ntBASIC28.76■■■□□ 2.2
CLTCL1P53675 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
CLTCL1P53675 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
CLTCL1P53675 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
CLTCL1P53675 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
CLTCL1P53675 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
CLTCL1P53675 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC28.76■■■□□ 2.19
CLTCL1P53675 TMPOP1-202ENST00000424642 1267 ntBASIC28.76■■■□□ 2.19
CLTCL1P53675 RBM42-202ENST00000586618 771 ntTSL 3 BASIC28.76■■■□□ 2.19
CLTCL1P53675 GLDC-219ENST00000640208 420 ntTSL 2 BASIC28.76■■■□□ 2.19
CLTCL1P53675 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC28.76■■■□□ 2.19
CLTCL1P53675 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC28.76■■■□□ 2.19
CLTCL1P53675 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC28.75■■■□□ 2.19
CLTCL1P53675 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC28.75■■■□□ 2.19
CLTCL1P53675 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC28.75■■■□□ 2.19
CLTCL1P53675 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC28.75■■■□□ 2.19
CLTCL1P53675 CYP2D8P-201ENST00000433633 1490 ntBASIC28.75■■■□□ 2.19
CLTCL1P53675 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
CLTCL1P53675 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC28.75■■■□□ 2.19
CLTCL1P53675 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
CLTCL1P53675 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC28.75■■■□□ 2.19
CLTCL1P53675 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
CLTCL1P53675 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC28.74■■■□□ 2.19
CLTCL1P53675 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC28.74■■■□□ 2.19
CLTCL1P53675 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC28.74■■■□□ 2.19
CLTCL1P53675 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC28.74■■■□□ 2.19
CLTCL1P53675 AC113347.1-201ENST00000413321 391 ntBASIC28.74■■■□□ 2.19
CLTCL1P53675 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC28.74■■■□□ 2.19
CLTCL1P53675 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
CLTCL1P53675 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC28.74■■■□□ 2.19
CLTCL1P53675 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC28.74■■■□□ 2.19
CLTCL1P53675 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
CLTCL1P53675 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC28.74■■■□□ 2.19
CLTCL1P53675 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC28.74■■■□□ 2.19
CLTCL1P53675 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC28.73■■■□□ 2.19
CLTCL1P53675 AC007225.1-201ENST00000566331 1836 ntBASIC28.73■■■□□ 2.19
CLTCL1P53675 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC28.73■■■□□ 2.19
CLTCL1P53675 MIR1238-201ENST00000408483 83 ntBASIC28.73■■■□□ 2.19
CLTCL1P53675 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
CLTCL1P53675 AL445228.2-201ENST00000605589 952 ntBASIC28.73■■■□□ 2.19
CLTCL1P53675 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC28.73■■■□□ 2.19
CLTCL1P53675 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
CLTCL1P53675 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC28.73■■■□□ 2.19
CLTCL1P53675 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
CLTCL1P53675 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC28.72■■■□□ 2.19
CLTCL1P53675 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms