Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LIMK1P53667 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LIMK1P53667 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
LIMK1P53667 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.79■□□□□ 0.76
LIMK1P53667 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.79■□□□□ 0.76
LIMK1P53667 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.79■□□□□ 0.76
LIMK1P53667 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
LIMK1P53667 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.79■□□□□ 0.76
LIMK1P53667 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LIMK1P53667 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LIMK1P53667 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.79■□□□□ 0.76
LIMK1P53667 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LIMK1P53667 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.79■□□□□ 0.76
LIMK1P53667 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LIMK1P53667 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.79■□□□□ 0.76
LIMK1P53667 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.79■□□□□ 0.76
LIMK1P53667 AP002982.1-201ENST00000492365 877 ntBASIC19.79■□□□□ 0.76
LIMK1P53667 KRT126P-201ENST00000549467 1181 ntBASIC19.79■□□□□ 0.76
LIMK1P53667 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.79■□□□□ 0.76
LIMK1P53667 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LIMK1P53667 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LIMK1P53667 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.79■□□□□ 0.76
LIMK1P53667 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
LIMK1P53667 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.78■□□□□ 0.76
LIMK1P53667 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.78■□□□□ 0.76
LIMK1P53667 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LIMK1P53667 AC010542.4-201ENST00000563151 1910 ntBASIC19.78■□□□□ 0.76
LIMK1P53667 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LIMK1P53667 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LIMK1P53667 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LIMK1P53667 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LIMK1P53667 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.78■□□□□ 0.76
LIMK1P53667 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
LIMK1P53667 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LIMK1P53667 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
LIMK1P53667 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LIMK1P53667 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LIMK1P53667 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.78■□□□□ 0.76
LIMK1P53667 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.78■□□□□ 0.76
LIMK1P53667 AC004264.1-201ENST00000608354 794 ntBASIC19.78■□□□□ 0.76
LIMK1P53667 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19.78■□□□□ 0.76
LIMK1P53667 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.78■□□□□ 0.76
LIMK1P53667 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.78■□□□□ 0.76
LIMK1P53667 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LIMK1P53667 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
LIMK1P53667 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LIMK1P53667 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.77■□□□□ 0.76
LIMK1P53667 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
LIMK1P53667 AC005229.4-201ENST00000610085 2198 ntBASIC19.77■□□□□ 0.76
LIMK1P53667 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.77■□□□□ 0.76
LIMK1P53667 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.77■□□□□ 0.76
LIMK1P53667 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LIMK1P53667 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LIMK1P53667 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LIMK1P53667 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
LIMK1P53667 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LIMK1P53667 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.77■□□□□ 0.76
LIMK1P53667 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
LIMK1P53667 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
LIMK1P53667 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
LIMK1P53667 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.77■□□□□ 0.76
LIMK1P53667 AL390955.1-201ENST00000428694 934 ntBASIC19.77■□□□□ 0.76
LIMK1P53667 LIN28AP1-201ENST00000429574 405 ntBASIC19.77■□□□□ 0.76
LIMK1P53667 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.77■□□□□ 0.76
LIMK1P53667 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.77■□□□□ 0.76
LIMK1P53667 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LIMK1P53667 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.77■□□□□ 0.76
LIMK1P53667 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LIMK1P53667 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.77■□□□□ 0.76
LIMK1P53667 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.77■□□□□ 0.76
LIMK1P53667 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.77■□□□□ 0.76
LIMK1P53667 LINC01238-205ENST00000567549 1107 ntBASIC19.77■□□□□ 0.76
LIMK1P53667 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.77■□□□□ 0.76
LIMK1P53667 AL356652.1-201ENST00000615962 565 ntBASIC19.77■□□□□ 0.76
LIMK1P53667 AC006011.2-201ENST00000621313 1158 ntBASIC19.77■□□□□ 0.76
LIMK1P53667 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LIMK1P53667 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LIMK1P53667 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.77■□□□□ 0.76
LIMK1P53667 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.77■□□□□ 0.76
LIMK1P53667 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
LIMK1P53667 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
LIMK1P53667 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LIMK1P53667 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.76■□□□□ 0.75
LIMK1P53667 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.76■□□□□ 0.75
LIMK1P53667 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LIMK1P53667 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LIMK1P53667 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LIMK1P53667 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LIMK1P53667 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LIMK1P53667 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.76■□□□□ 0.75
LIMK1P53667 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LIMK1P53667 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LIMK1P53667 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LIMK1P53667 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LIMK1P53667 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LIMK1P53667 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LIMK1P53667 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
LIMK1P53667 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LIMK1P53667 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
LIMK1P53667 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms