Protein–RNA interactions for Protein: P53225

YGR039W, Uncharacterized protein YGR039W, yeast

Predictions only

Length 103 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
YGR039W	P53225	YML100W-A	YML100W-A	174 nt		-1.22	□□□□□ -2.6
YGR039W	P53225	CSN9	YDR179C	489 nt		-1.24	□□□□□ -2.61
YGR039W	P53225	YER079W	YER079W	633 nt		-1.24	□□□□□ -2.61
YGR039W	P53225	RPS27B	YHR021C	249 nt		-1.26	□□□□□ -2.61
YGR039W	P53225	YKL123W	YKL123W	381 nt		-1.27	□□□□□ -2.61
YGR039W	P53225	YER053C-A	YER053C-A	114 nt		-1.28	□□□□□ -2.61
YGR039W	P53225	YMR193C-A	YMR193C-A	387 nt		-1.28	□□□□□ -2.61
YGR039W	P53225	PAU9	YBL108C-A	129 nt		-1.28	□□□□□ -2.61
YGR039W	P53225	YER006C-A	YER006C-A	318 nt		-1.3	□□□□□ -2.62
YGR039W	P53225	YGR069W	YGR069W	336 nt		-1.3	□□□□□ -2.62
YGR039W	P53225	YPL060C-A	YPL060C-A	3315 nt		-1.31	□□□□□ -2.62
YGR039W	P53225	COG6	YNL041C	2520 nt		-1.31	□□□□□ -2.62
YGR039W	P53225	CSE2	YNR010W	450 nt		-1.31	□□□□□ -2.62
YGR039W	P53225	snR161	snR161	161 nt		-1.31	□□□□□ -2.62
YGR039W	P53225	STE18	YJR086W	333 nt		-1.32	□□□□□ -2.62
YGR039W	P53225	YIL115W-A	YIL115W-A	372 nt		-1.33	□□□□□ -2.62
YGR039W	P53225	YIL002W-A	YIL002W-A	210 nt		-1.36	□□□□□ -2.63
YGR039W	P53225	APQ12	YIL040W	417 nt		-1.36	□□□□□ -2.63
YGR039W	P53225	YJL197C-A	YJL197C-A	282 nt		-1.36	□□□□□ -2.63
YGR039W	P53225	YLL019W-A	YLL019W-A	93 nt		-1.36	□□□□□ -2.63
YGR039W	P53225	YBR223W-A	YBR223W-A	120 nt		-1.37	□□□□□ -2.63
YGR039W	P53225	YJL182C	YJL182C	318 nt		-1.38	□□□□□ -2.63
YGR039W	P53225	TOM22	YNL131W	459 nt		-1.4	□□□□□ -2.63
YGR039W	P53225	snR41	snR41	95 nt		-1.41	□□□□□ -2.64
YGR039W	P53225	YNL122C	YNL122C	348 nt		-1.42	□□□□□ -2.64
YGR039W	P53225	YCR038W-A	YCR038W-A	126 nt		-1.43	□□□□□ -2.64
YGR039W	P53225	YDR544C	YDR544C	429 nt		-1.43	□□□□□ -2.64
YGR039W	P53225	YLR434C	YLR434C	384 nt		-1.46	□□□□□ -2.64
YGR039W	P53225	YGL052W	YGL052W	306 nt		-1.47	□□□□□ -2.64
YGR039W	P53225	YPR016W-A	YPR016W-A	261 nt		-1.5	□□□□□ -2.65
YGR039W	P53225	snR49	snR49	165 nt		-1.5	□□□□□ -2.65
YGR039W	P53225	HMRA1	YCR097W	381 nt		-1.51	□□□□□ -2.65
YGR039W	P53225	TAH1	YCR060W	336 nt		-1.54	□□□□□ -2.66
YGR039W	P53225	YER137W-A	YER137W-A	306 nt		-1.54	□□□□□ -2.66
YGR039W	P53225	YOR170W	YOR170W	306 nt		-1.54	□□□□□ -2.66
YGR039W	P53225	YPR010C-A	YPR010C-A	219 nt		-1.55	□□□□□ -2.66
YGR039W	P53225	YDR048C	YDR048C	315 nt		-1.56	□□□□□ -2.66
YGR039W	P53225	YJL077W-A	YJL077W-A	87 nt		-1.56	□□□□□ -2.66
YGR039W	P53225	YLR154W-F	YLR154W-F	141 nt		-1.56	□□□□□ -2.66
YGR039W	P53225	YOR072W-B	YOR072W-B	162 nt		-1.57	□□□□□ -2.66
YGR039W	P53225	YAF9	YNL107W	681 nt		-1.59	□□□□□ -2.66
YGR039W	P53225	YGL182C	YGL182C	324 nt		-1.61	□□□□□ -2.67
YGR039W	P53225	YGL149W	YGL149W	306 nt		-1.63	□□□□□ -2.67
YGR039W	P53225	YML099W-A	YML099W-A	330 nt		-1.63	□□□□□ -2.67
YGR039W	P53225	YOR015W	YOR015W	360 nt		-1.64	□□□□□ -2.67
YGR039W	P53225	YOR314W-A	YOR314W-A	111 nt		-1.64	□□□□□ -2.67
YGR039W	P53225	tQ(UUG)Q	tQ(UUG)Q	76 nt		-1.65	□□□□□ -2.67
YGR039W	P53225	snR60	snR60	104 nt		-1.66	□□□□□ -2.68
YGR039W	P53225	YNR025C	YNR025C	360 nt		-1.66	□□□□□ -2.68
YGR039W	P53225	tW(UCA)Q	tW(UCA)Q	74 nt		-1.68	□□□□□ -2.68
YGR039W	P53225	YDL158C	YDL158C	309 nt		-1.69	□□□□□ -2.68
YGR039W	P53225	YBL039C-A	YBL039C-A	84 nt		-1.7	□□□□□ -2.68
YGR039W	P53225	YOL013W-B	YOL013W-B	291 nt		-1.7	□□□□□ -2.68
YGR039W	P53225	tP(UGG)Q	tP(UGG)Q	72 nt		-1.71	□□□□□ -2.68
YGR039W	P53225	YMR001C-A	YMR001C-A	231 nt		-1.72	□□□□□ -2.68
YGR039W	P53225	YLR406C-A	YLR406C-A	150 nt		-1.74	□□□□□ -2.69
YGR039W	P53225	YOR121C	YOR121C	306 nt		-1.76	□□□□□ -2.69
YGR039W	P53225	snR69	snR69	101 nt		-1.78	□□□□□ -2.69
YGR039W	P53225	YER090C-A	YER090C-A	90 nt		-1.78	□□□□□ -2.69
YGR039W	P53225	tR(UCU)Q1	tR(UCU)Q1	73 nt		-1.79	□□□□□ -2.7
YGR039W	P53225	JLP2	YMR132C	627 nt		-1.79	□□□□□ -2.7
YGR039W	P53225	YNL266W	YNL266W	420 nt		-1.79	□□□□□ -2.7
YGR039W	P53225	snR74	snR74	88 nt		-1.81	□□□□□ -2.7
YGR039W	P53225	YIL032C	YIL032C	357 nt		-1.82	□□□□□ -2.7
YGR039W	P53225	snR50	snR50	90 nt		-1.82	□□□□□ -2.7
YGR039W	P53225	YLR202C	YLR202C	327 nt		-1.83	□□□□□ -2.7
YGR039W	P53225	YNL028W	YNL028W	318 nt		-1.83	□□□□□ -2.7
YGR039W	P53225	YNL324W	YNL324W	396 nt		-1.85	□□□□□ -2.71
YGR039W	P53225	ATP19	YOL077W-A	207 nt		-1.85	□□□□□ -2.71
YGR039W	P53225	BIL1	YOR304C-A	231 nt		-1.85	□□□□□ -2.71
YGR039W	P53225	YNR077C	YNR077C	255 nt		-1.86	□□□□□ -2.71
YGR039W	P53225	YDR102C	YDR102C	333 nt		-1.87	□□□□□ -2.71
YGR039W	P53225	snR78	snR78	87 nt		-1.88	□□□□□ -2.71
YGR039W	P53225	YBR285W	YBR285W	435 nt		-1.88	□□□□□ -2.71
YGR039W	P53225	HTL1	YCR020W-B	237 nt		-1.89	□□□□□ -2.71
YGR039W	P53225	snR189	snR189	189 nt		-1.89	□□□□□ -2.71
YGR039W	P53225	YLR120W-A	YLR120W-A	102 nt		-1.91	□□□□□ -2.72
YGR039W	P53225	RDS3	YPR094W	324 nt		-1.91	□□□□□ -2.72
YGR039W	P53225	YKL063C	YKL063C	504 nt		-1.93	□□□□□ -2.72
YGR039W	P53225	ATP6	Q0085	780 nt		-1.94	□□□□□ -2.72
YGR039W	P53225	SKI7	YOR076C	2244 nt		-1.95	□□□□□ -2.72
YGR039W	P53225	YFL032W	YFL032W	321 nt		-1.95	□□□□□ -2.72
YGR039W	P53225	YER097W	YER097W	330 nt		-1.99	□□□□□ -2.73
YGR039W	P53225	PMP2	YEL017C-A	132 nt		-2.02	□□□□□ -2.73
YGR039W	P53225	tY(GUA)Q	tY(GUA)Q	84 nt		-2.02	□□□□□ -2.73
YGR039W	P53225	snR67	snR67	82 nt		-2.03	□□□□□ -2.73
YGR039W	P53225	tM(CAU)Q2	tM(CAU)Q2	78 nt		-2.06	□□□□□ -2.74
YGR039W	P53225	YGR035C	YGR035C	351 nt		-2.07	□□□□□ -2.74
YGR039W	P53225	YGL041C	YGL041C	204 nt		-2.09	□□□□□ -2.74
YGR039W	P53225	YGR146C-A	YGR146C-A	162 nt		-2.09	□□□□□ -2.74
YGR039W	P53225	YAL063C-A	YAL063C-A	291 nt		-2.1	□□□□□ -2.75
YGR039W	P53225	YMR172C-A	YMR172C-A	384 nt		-2.11	□□□□□ -2.75
YGR039W	P53225	YFL019C	YFL019C	354 nt		-2.14	□□□□□ -2.75
YGR039W	P53225	YOR381W-A	YOR381W-A	168 nt		-2.14	□□□□□ -2.75
YGR039W	P53225	YAL068W-A	YAL068W-A	255 nt		-2.16	□□□□□ -2.76
YGR039W	P53225	snR39B	snR39B	96 nt		-2.16	□□□□□ -2.76
YGR039W	P53225	CDC65	tQ(CUG)M	72 nt		-2.19	□□□□□ -2.76
YGR039W	P53225	YEL050W-A	YEL050W-A	192 nt		-2.2	□□□□□ -2.76
YGR039W	P53225	YML054C-A	YML054C-A	159 nt		-2.2	□□□□□ -2.76
YGR039W	P53225	tD(GUC)Q	tD(GUC)Q	75 nt		-2.21	□□□□□ -2.76

Retrieved 100 of 7,029 protein–RNA pairs in 13.3 ms