Protein–RNA interactions for Protein: P53207

SNU71, U1 small nuclear ribonucleoprotein component SNU71, yeastyeast

Known RBP Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SNU71P53207 tV(UAC)BtV(UAC)B 74 nt1.49□□□□□ -2.17
SNU71P53207 tV(UAC)DtV(UAC)D 74 nt1.49□□□□□ -2.17
SNU71P53207 YLR399W-AYLR399W-A 105 nt1.49□□□□□ -2.17
SNU71P53207 PRP42YDR235W 1635 nt1.48□□□□□ -2.17
SNU71P53207 YPR160W-AYPR160W-A 81 nt1.47□□□□□ -2.17
SNU71P53207 YDL073WYDL073W 2955 nt1.46□□□□□ -2.18
SNU71P53207 FYV10YIL097W 1551 nt1.44□□□□□ -2.18
SNU71P53207 PRP5YBR237W 2550 nt1.44□□□□□ -2.18
SNU71P53207 YOR381W-AYOR381W-A 168 nt1.44□□□□□ -2.18
SNU71P53207 UTP8YGR128C 2142 nt1.43□□□□□ -2.18
SNU71P53207 TRS65YGR166W 1683 nt1.42□□□□□ -2.18
SNU71P53207 SIP4YJL089W 2490 nt1.41□□□□□ -2.18
SNU71P53207 SPT7YBR081C 3999 nt1.4□□□□□ -2.18
SNU71P53207 SCC2YDR180W 4482 nt1.39□□□□□ -2.19
SNU71P53207 RPM2YML091C 3609 nt1.39□□□□□ -2.19
SNU71P53207 UBP3YER151C 2739 nt1.35□□□□□ -2.19
SNU71P53207 YGL182CYGL182C 324 nt1.33□□□□□ -2.2
SNU71P53207 YHR131W-AYHR131W-A 246 nt1.33□□□□□ -2.2
SNU71P53207 YNL284C-BYNL284C-B 5268 nt1.32□□□□□ -2.2
SNU71P53207 YBL039C-AYBL039C-A 84 nt1.32□□□□□ -2.2
SNU71P53207 tN(GUU)QtN(GUU)Q 71 nt1.31□□□□□ -2.2
SNU71P53207 YLR294CYLR294C 330 nt1.31□□□□□ -2.2
SNU71P53207 YNL338WYNL338W 159 nt1.31□□□□□ -2.2
SNU71P53207 TAH1YCR060W 336 nt1.3□□□□□ -2.2
SNU71P53207 YLR232WYLR232W 348 nt1.3□□□□□ -2.2
SNU71P53207 YSP1YHR155W 3687 nt1.29□□□□□ -2.2
SNU71P53207 YOR170WYOR170W 306 nt1.29□□□□□ -2.2
SNU71P53207 YPR117WYPR117W 7470 nt1.29□□□□□ -2.2
SNU71P53207 OST4YDL232W 111 nt1.28□□□□□ -2.2
SNU71P53207 CHS6YJL099W 2241 nt1.28□□□□□ -2.2
SNU71P53207 SNU13YEL026W 381 nt1.27□□□□□ -2.21
SNU71P53207 EMT1tM(CAU)D 73 nt1.27□□□□□ -2.21
SNU71P53207 EMT5tM(CAU)J1 73 nt1.27□□□□□ -2.21
SNU71P53207 EMT3tM(CAU)J2 73 nt1.27□□□□□ -2.21
SNU71P53207 EMT4tM(CAU)M 73 nt1.27□□□□□ -2.21
SNU71P53207 EMT2tM(CAU)O2 73 nt1.27□□□□□ -2.21
SNU71P53207 VAM6YDL077C 3150 nt1.26□□□□□ -2.21
SNU71P53207 snR48snR48 113 nt1.26□□□□□ -2.21
SNU71P53207 LTE1YAL024C 4308 nt1.24□□□□□ -2.21
SNU71P53207 RKR1YMR247C 4689 nt1.24□□□□□ -2.21
SNU71P53207 PAU12YGR294W 363 nt1.23□□□□□ -2.21
SNU71P53207 PAU24YBR301W 363 nt1.23□□□□□ -2.21
SNU71P53207 BEM3YPL115C 3387 nt1.23□□□□□ -2.21
SNU71P53207 YJR029WYJR029W 5268 nt1.2□□□□□ -2.22
SNU71P53207 YPR137C-BYPR137C-B 5268 nt1.2□□□□□ -2.22
SNU71P53207 YHL015W-AYHL015W-A 84 nt1.18□□□□□ -2.22
SNU71P53207 YOR102WYOR102W 351 nt1.18□□□□□ -2.22
SNU71P53207 UTP20YBL004W 7482 nt1.18□□□□□ -2.22
SNU71P53207 YJL127W-AYJL127W-A 117 nt1.14□□□□□ -2.23
SNU71P53207 tF(GAA)BtF(GAA)B 73 nt1.13□□□□□ -2.23
SNU71P53207 tF(GAA)FtF(GAA)F 73 nt1.13□□□□□ -2.23
SNU71P53207 tF(GAA)GtF(GAA)G 73 nt1.13□□□□□ -2.23
SNU71P53207 tF(GAA)H1tF(GAA)H1 73 nt1.13□□□□□ -2.23
SNU71P53207 tF(GAA)H2tF(GAA)H2 73 nt1.13□□□□□ -2.23
SNU71P53207 tF(GAA)MtF(GAA)M 73 nt1.13□□□□□ -2.23
SNU71P53207 tF(GAA)P1tF(GAA)P1 73 nt1.13□□□□□ -2.23
SNU71P53207 tF(GAA)P2tF(GAA)P2 73 nt1.13□□□□□ -2.23
SNU71P53207 DOP1YDR141C 5097 nt1.13□□□□□ -2.23
SNU71P53207 SEC1YDR164C 2175 nt1.13□□□□□ -2.23
SNU71P53207 ULP2YIL031W 3105 nt1.12□□□□□ -2.23
SNU71P53207 YOR314W-AYOR314W-A 111 nt1.11□□□□□ -2.23
SNU71P53207 YDL007C-AYDL007C-A 258 nt1.09□□□□□ -2.23
SNU71P53207 tL(UAA)QtL(UAA)Q 85 nt1.09□□□□□ -2.23
SNU71P53207 QCR9YGR183C 201 nt1.09□□□□□ -2.23
SNU71P53207 YIL142C-AYIL142C-A 333 nt1.09□□□□□ -2.23
SNU71P53207 YBL053WYBL053W 375 nt1.09□□□□□ -2.23
SNU71P53207 COG6YNL041C 2520 nt1.09□□□□□ -2.24
SNU71P53207 BUD3YCL014W 4911 nt1.08□□□□□ -2.24
SNU71P53207 YDR544CYDR544C 429 nt1.08□□□□□ -2.24
SNU71P53207 NNF2YGR089W 2811 nt1.06□□□□□ -2.24
SNU71P53207 YBR072C-AYBR072C-A 162 nt1.06□□□□□ -2.24
SNU71P53207 GLG1YKR058W 1851 nt1.05□□□□□ -2.24
SNU71P53207 YOR329W-AYOR329W-A 210 nt1.05□□□□□ -2.24
SNU71P53207 BEM2YER155C 6504 nt1.05□□□□□ -2.24
SNU71P53207 YLL006W-AYLL006W-A 177 nt1.02□□□□□ -2.25
SNU71P53207 MYO1YHR023W 5787 nt1.01□□□□□ -2.25
SNU71P53207 SDH6YDR379C-A 240 nt1.01□□□□□ -2.25
SNU71P53207 tM(CAU)Q2tM(CAU)Q2 78 nt1.01□□□□□ -2.25
SNU71P53207 BUL2YML111W 2763 nt1□□□□□ -2.25
SNU71P53207 YPR159C-AYPR159C-A 102 nt1□□□□□ -2.25
SNU71P53207 YMR160WYMR160W 2451 nt0.98□□□□□ -2.25
SNU71P53207 PET111YMR257C 2403 nt0.98□□□□□ -2.25
SNU71P53207 IQG1YPL242C 4488 nt0.97□□□□□ -2.25
SNU71P53207 NIP1YMR309C 2439 nt0.97□□□□□ -2.25
SNU71P53207 snR39BsnR39B 96 nt0.96□□□□□ -2.26
SNU71P53207 MLP1YKR095W 5628 nt0.93□□□□□ -2.26
SNU71P53207 YDR210WYDR210W 228 nt0.93□□□□□ -2.26
SNU71P53207 YGR164WYGR164W 336 nt0.93□□□□□ -2.26
SNU71P53207 YPL060C-AYPL060C-A 3315 nt0.92□□□□□ -2.26
SNU71P53207 YOR192C-BYOR192C-B 5313 nt0.92□□□□□ -2.26
SNU71P53207 YNL067W-BYNL067W-B 141 nt0.91□□□□□ -2.26
SNU71P53207 YOL014WYOL014W 375 nt0.91□□□□□ -2.26
SNU71P53207 RPS26AYGL189C 360 nt0.9□□□□□ -2.27
SNU71P53207 YGR146C-AYGR146C-A 162 nt0.9□□□□□ -2.27
SNU71P53207 YDR371C-AYDR371C-A 105 nt0.88□□□□□ -2.27
SNU71P53207 tT(AGU)BtT(AGU)B 73 nt0.86□□□□□ -2.27
SNU71P53207 tT(AGU)CtT(AGU)C 73 nt0.86□□□□□ -2.27
SNU71P53207 tT(AGU)DtT(AGU)D 73 nt0.86□□□□□ -2.27
SNU71P53207 tT(AGU)HtT(AGU)H 73 nt0.86□□□□□ -2.27
SNU71P53207 tT(AGU)I1tT(AGU)I1 73 nt0.86□□□□□ -2.27
Retrieved 100 of 7,029 protein–RNA pairs in 13.6 ms