Protein–RNA interactions for Protein: P48836

VMA10, V-type proton ATPase subunit G, yeast

Known RBP Predictions only

Length 114 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA10	P48836	GLG1	YKR058W	1851 nt		-0.84	□□□□□ -2.54
VMA10	P48836	YGR069W	YGR069W	336 nt		-0.85	□□□□□ -2.55
VMA10	P48836	AGA2	YGL032C	264 nt		-0.86	□□□□□ -2.55
VMA10	P48836	YKL100W-A	YKL100W-A	90 nt		-0.86	□□□□□ -2.55
VMA10	P48836	YDR544C	YDR544C	429 nt		-0.89	□□□□□ -2.55
VMA10	P48836	YNR025C	YNR025C	360 nt		-0.89	□□□□□ -2.55
VMA10	P48836	tA(UGC)Q	tA(UGC)Q	76 nt		-0.9	□□□□□ -2.55
VMA10	P48836	RPM2	YML091C	3609 nt		-0.91	□□□□□ -2.55
VMA10	P48836	CSE2	YNR010W	450 nt		-0.91	□□□□□ -2.56
VMA10	P48836	YMR193C-A	YMR193C-A	387 nt		-0.92	□□□□□ -2.56
VMA10	P48836	PAU9	YBL108C-A	129 nt		-0.92	□□□□□ -2.56
VMA10	P48836	YJL113W	YJL113W	4647 nt		-0.93	□□□□□ -2.56
VMA10	P48836	APQ12	YIL040W	417 nt		-0.93	□□□□□ -2.56
VMA10	P48836	YJL197C-A	YJL197C-A	282 nt		-0.93	□□□□□ -2.56
VMA10	P48836	snR33	snR33	183 nt		-0.93	□□□□□ -2.56
VMA10	P48836	YDR048C	YDR048C	315 nt		-0.94	□□□□□ -2.56
VMA10	P48836	YER079W	YER079W	633 nt		-0.94	□□□□□ -2.56
VMA10	P48836	YPR170W-A	YPR170W-A	186 nt		-0.94	□□□□□ -2.56
VMA10	P48836	snR36	snR36	182 nt		-0.94	□□□□□ -2.56
VMA10	P48836	YML100W-A	YML100W-A	174 nt		-0.95	□□□□□ -2.56
VMA10	P48836	tW(UCA)Q	tW(UCA)Q	74 nt		-0.96	□□□□□ -2.56
VMA10	P48836	YPR016W-A	YPR016W-A	261 nt		-0.96	□□□□□ -2.56
VMA10	P48836	snR78	snR78	87 nt		-0.97	□□□□□ -2.56
VMA10	P48836	YCR038W-A	YCR038W-A	126 nt		-0.99	□□□□□ -2.57
VMA10	P48836	YLR406C-A	YLR406C-A	150 nt		-1	□□□□□ -2.57
VMA10	P48836	YER137W-A	YER137W-A	306 nt		-1.02	□□□□□ -2.57
VMA10	P48836	COG6	YNL041C	2520 nt		-1.03	□□□□□ -2.57
VMA10	P48836	snR60	snR60	104 nt		-1.03	□□□□□ -2.57
VMA10	P48836	HMRA1	YCR097W	381 nt		-1.03	□□□□□ -2.57
VMA10	P48836	tT(UGU)G1	tT(UGU)G1	72 nt		-1.03	□□□□□ -2.57
VMA10	P48836	tT(UGU)G2	tT(UGU)G2	72 nt		-1.03	□□□□□ -2.57
VMA10	P48836	tT(UGU)P	tT(UGU)P	72 nt		-1.03	□□□□□ -2.57
VMA10	P48836	TAH1	YCR060W	336 nt		-1.04	□□□□□ -2.58
VMA10	P48836	YIL002W-A	YIL002W-A	210 nt		-1.05	□□□□□ -2.58
VMA10	P48836	YLR154W-F	YLR154W-F	141 nt		-1.06	□□□□□ -2.58
VMA10	P48836	YMR001C-A	YMR001C-A	231 nt		-1.06	□□□□□ -2.58
VMA10	P48836	YOL013W-B	YOL013W-B	291 nt		-1.07	□□□□□ -2.58
VMA10	P48836	ATP19	YOL077W-A	207 nt		-1.07	□□□□□ -2.58
VMA10	P48836	YGL052W	YGL052W	306 nt		-1.09	□□□□□ -2.58
VMA10	P48836	YOR072W-B	YOR072W-B	162 nt		-1.09	□□□□□ -2.58
VMA10	P48836	YOR170W	YOR170W	306 nt		-1.1	□□□□□ -2.59
VMA10	P48836	YPL060C-A	YPL060C-A	3315 nt		-1.1	□□□□□ -2.59
VMA10	P48836	YDL158C	YDL158C	309 nt		-1.12	□□□□□ -2.59
VMA10	P48836	YML099W-A	YML099W-A	330 nt		-1.13	□□□□□ -2.59
VMA10	P48836	YJL182C	YJL182C	318 nt		-1.15	□□□□□ -2.59
VMA10	P48836	YOR015W	YOR015W	360 nt		-1.15	□□□□□ -2.59
VMA10	P48836	YOR121C	YOR121C	306 nt		-1.15	□□□□□ -2.59
VMA10	P48836	YPR010C-A	YPR010C-A	219 nt		-1.16	□□□□□ -2.6
VMA10	P48836	YBR285W	YBR285W	435 nt		-1.16	□□□□□ -2.6
VMA10	P48836	snR49	snR49	165 nt		-1.18	□□□□□ -2.6
VMA10	P48836	snR74	snR74	88 nt		-1.19	□□□□□ -2.6
VMA10	P48836	tQ(UUG)Q	tQ(UUG)Q	76 nt		-1.19	□□□□□ -2.6
VMA10	P48836	YBL039C-A	YBL039C-A	84 nt		-1.19	□□□□□ -2.6
VMA10	P48836	YGL149W	YGL149W	306 nt		-1.2	□□□□□ -2.6
VMA10	P48836	YIL032C	YIL032C	357 nt		-1.2	□□□□□ -2.6
VMA10	P48836	YLR202C	YLR202C	327 nt		-1.21	□□□□□ -2.6
VMA10	P48836	YOR314W-A	YOR314W-A	111 nt		-1.21	□□□□□ -2.6
VMA10	P48836	YAF9	YNL107W	681 nt		-1.22	□□□□□ -2.6
VMA10	P48836	BIL1	YOR304C-A	231 nt		-1.23	□□□□□ -2.61
VMA10	P48836	YNL324W	YNL324W	396 nt		-1.24	□□□□□ -2.61
VMA10	P48836	YJL077W-A	YJL077W-A	87 nt		-1.26	□□□□□ -2.61
VMA10	P48836	ATP6	Q0085	780 nt		-1.27	□□□□□ -2.61
VMA10	P48836	YGL182C	YGL182C	324 nt		-1.27	□□□□□ -2.61
VMA10	P48836	YKL063C	YKL063C	504 nt		-1.27	□□□□□ -2.61
VMA10	P48836	YNL028W	YNL028W	318 nt		-1.27	□□□□□ -2.61
VMA10	P48836	snR50	snR50	90 nt		-1.29	□□□□□ -2.62
VMA10	P48836	snR69	snR69	101 nt		-1.3	□□□□□ -2.62
VMA10	P48836	YLR120W-A	YLR120W-A	102 nt		-1.3	□□□□□ -2.62
VMA10	P48836	YHL009W-B	YHL009W-B	5409 nt		-1.31	□□□□□ -2.62
VMA10	P48836	tP(UGG)Q	tP(UGG)Q	72 nt		-1.31	□□□□□ -2.62
VMA10	P48836	YNL266W	YNL266W	420 nt		-1.31	□□□□□ -2.62
VMA10	P48836	snR161	snR161	161 nt		-1.31	□□□□□ -2.62
VMA10	P48836	HTL1	YCR020W-B	237 nt		-1.33	□□□□□ -2.62
VMA10	P48836	JLP2	YMR132C	627 nt		-1.34	□□□□□ -2.62
VMA10	P48836	YEL050W-A	YEL050W-A	192 nt		-1.36	□□□□□ -2.63
VMA10	P48836	YFL032W	YFL032W	321 nt		-1.36	□□□□□ -2.63
VMA10	P48836	YER090C-A	YER090C-A	90 nt		-1.37	□□□□□ -2.63
VMA10	P48836	YDR102C	YDR102C	333 nt		-1.38	□□□□□ -2.63
VMA10	P48836	YGR035C	YGR035C	351 nt		-1.38	□□□□□ -2.63
VMA10	P48836	YOR293C-A	YOR293C-A	150 nt		-1.39	□□□□□ -2.63
VMA10	P48836	YGL041C	YGL041C	204 nt		-1.42	□□□□□ -2.64
VMA10	P48836	YFL019C	YFL019C	354 nt		-1.43	□□□□□ -2.64
VMA10	P48836	YAL068W-A	YAL068W-A	255 nt		-1.43	□□□□□ -2.64
VMA10	P48836	YJR157W	YJR157W	363 nt		-1.44	□□□□□ -2.64
VMA10	P48836	YMR172C-A	YMR172C-A	384 nt		-1.45	□□□□□ -2.64
VMA10	P48836	RDS3	YPR094W	324 nt		-1.46	□□□□□ -2.64
VMA10	P48836	YEL014C	YEL014C	306 nt		-1.47	□□□□□ -2.64
VMA10	P48836	YER097W	YER097W	330 nt		-1.49	□□□□□ -2.65
VMA10	P48836	PMP2	YEL017C-A	132 nt		-1.51	□□□□□ -2.65
VMA10	P48836	tM(CAU)Q2	tM(CAU)Q2	78 nt		-1.51	□□□□□ -2.65
VMA10	P48836	snR189	snR189	189 nt		-1.52	□□□□□ -2.65
VMA10	P48836	YAL063C-A	YAL063C-A	291 nt		-1.53	□□□□□ -2.65
VMA10	P48836	SKI7	YOR076C	2244 nt		-1.53	□□□□□ -2.65
VMA10	P48836	YOR381W-A	YOR381W-A	168 nt		-1.53	□□□□□ -2.65
VMA10	P48836	YBR223W-A	YBR223W-A	120 nt		-1.56	□□□□□ -2.66
VMA10	P48836	snR67	snR67	82 nt		-1.57	□□□□□ -2.66
VMA10	P48836	snR39B	snR39B	96 nt		-1.59	□□□□□ -2.66
VMA10	P48836	YDR183C-A	YDR183C-A	258 nt		-1.6	□□□□□ -2.67
VMA10	P48836	YBR182C-A	YBR182C-A	195 nt		-1.6	□□□□□ -2.67
VMA10	P48836	YOR008C-A	YOR008C-A	225 nt		-1.61	□□□□□ -2.67

Retrieved 100 of 7,029 protein–RNA pairs in 15.4 ms