Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.78■□□□□ 0.44
CSNK1A1P48729 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CSNK1A1P48729 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CSNK1A1P48729 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CSNK1A1P48729 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CSNK1A1P48729 DUSP5P2-201ENST00000426873 1033 ntBASIC17.78■□□□□ 0.44
CSNK1A1P48729 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CSNK1A1P48729 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.78■□□□□ 0.44
CSNK1A1P48729 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.78■□□□□ 0.44
CSNK1A1P48729 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CSNK1A1P48729 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.78■□□□□ 0.44
CSNK1A1P48729 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.78■□□□□ 0.44
CSNK1A1P48729 AL031963.3-201ENST00000606441 850 ntBASIC17.78■□□□□ 0.44
CSNK1A1P48729 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
CSNK1A1P48729 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CSNK1A1P48729 KRT8P17-201ENST00000453110 1448 ntBASIC17.78■□□□□ 0.44
CSNK1A1P48729 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CSNK1A1P48729 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CSNK1A1P48729 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CSNK1A1P48729 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CSNK1A1P48729 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CSNK1A1P48729 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CSNK1A1P48729 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CSNK1A1P48729 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.77■□□□□ 0.44
CSNK1A1P48729 HLA-G-202ENST00000376815 851 ntBASIC17.77■□□□□ 0.44
CSNK1A1P48729 HLA-G-203ENST00000376818 1127 ntBASIC17.77■□□□□ 0.44
CSNK1A1P48729 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CSNK1A1P48729 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.77■□□□□ 0.44
CSNK1A1P48729 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.77■□□□□ 0.44
CSNK1A1P48729 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CSNK1A1P48729 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.77■□□□□ 0.44
CSNK1A1P48729 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CSNK1A1P48729 KRT8P20-201ENST00000423953 1409 ntBASIC17.77■□□□□ 0.44
CSNK1A1P48729 BX119927.1-201ENST00000636596 1552 ntBASIC17.77■□□□□ 0.44
CSNK1A1P48729 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CSNK1A1P48729 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CSNK1A1P48729 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.77■□□□□ 0.43
CSNK1A1P48729 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
CSNK1A1P48729 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.77■□□□□ 0.43
CSNK1A1P48729 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.77■□□□□ 0.43
CSNK1A1P48729 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.43
CSNK1A1P48729 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CSNK1A1P48729 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.77■□□□□ 0.43
CSNK1A1P48729 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.76■□□□□ 0.43
CSNK1A1P48729 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.76■□□□□ 0.43
CSNK1A1P48729 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.76■□□□□ 0.43
CSNK1A1P48729 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CSNK1A1P48729 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CSNK1A1P48729 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CSNK1A1P48729 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
CSNK1A1P48729 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.76■□□□□ 0.43
CSNK1A1P48729 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CSNK1A1P48729 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.76■□□□□ 0.43
CSNK1A1P48729 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CSNK1A1P48729 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CSNK1A1P48729 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.76■□□□□ 0.43
CSNK1A1P48729 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.76■□□□□ 0.43
CSNK1A1P48729 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.76■□□□□ 0.43
CSNK1A1P48729 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.76■□□□□ 0.43
CSNK1A1P48729 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CSNK1A1P48729 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CSNK1A1P48729 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CSNK1A1P48729 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CSNK1A1P48729 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
CSNK1A1P48729 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.75■□□□□ 0.43
CSNK1A1P48729 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.75■□□□□ 0.43
CSNK1A1P48729 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CSNK1A1P48729 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CSNK1A1P48729 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CSNK1A1P48729 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CSNK1A1P48729 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CSNK1A1P48729 AC112907.3-201ENST00000577781 2400 ntBASIC17.75■□□□□ 0.43
CSNK1A1P48729 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CSNK1A1P48729 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.75■□□□□ 0.43
CSNK1A1P48729 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CSNK1A1P48729 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.75■□□□□ 0.43
CSNK1A1P48729 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.75■□□□□ 0.43
CSNK1A1P48729 AC091874.3-201ENST00000512672 1195 ntBASIC17.75■□□□□ 0.43
CSNK1A1P48729 AC023632.3-201ENST00000521633 145 ntBASIC17.75■□□□□ 0.43
CSNK1A1P48729 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC17.75■□□□□ 0.43
CSNK1A1P48729 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CSNK1A1P48729 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
CSNK1A1P48729 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
CSNK1A1P48729 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.75■□□□□ 0.43
CSNK1A1P48729 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CSNK1A1P48729 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CSNK1A1P48729 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.75■□□□□ 0.43
CSNK1A1P48729 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
CSNK1A1P48729 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CSNK1A1P48729 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CSNK1A1P48729 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CSNK1A1P48729 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CSNK1A1P48729 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CSNK1A1P48729 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CSNK1A1P48729 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CSNK1A1P48729 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CSNK1A1P48729 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.74■□□□□ 0.43
CSNK1A1P48729 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CSNK1A1P48729 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CSNK1A1P48729 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms