Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.32■□□□□ 0.68
SLC6A12P48065 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SLC6A12P48065 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SLC6A12P48065 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SLC6A12P48065 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SLC6A12P48065 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
SLC6A12P48065 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
SLC6A12P48065 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC6A12P48065 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.31■□□□□ 0.68
SLC6A12P48065 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SLC6A12P48065 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC6A12P48065 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC6A12P48065 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC6A12P48065 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC6A12P48065 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.31■□□□□ 0.68
SLC6A12P48065 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.31■□□□□ 0.68
SLC6A12P48065 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.31■□□□□ 0.68
SLC6A12P48065 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.31■□□□□ 0.68
SLC6A12P48065 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.31■□□□□ 0.68
SLC6A12P48065 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC6A12P48065 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.31■□□□□ 0.68
SLC6A12P48065 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC6A12P48065 AC009237.14-201ENST00000609975 1594 ntBASIC19.31■□□□□ 0.68
SLC6A12P48065 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC6A12P48065 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC6A12P48065 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC6A12P48065 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SLC6A12P48065 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.3■□□□□ 0.68
SLC6A12P48065 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.3■□□□□ 0.68
SLC6A12P48065 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.3■□□□□ 0.68
SLC6A12P48065 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC6A12P48065 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC6A12P48065 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
SLC6A12P48065 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SLC6A12P48065 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.3■□□□□ 0.68
SLC6A12P48065 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC6A12P48065 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC6A12P48065 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC6A12P48065 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.3■□□□□ 0.68
SLC6A12P48065 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
SLC6A12P48065 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
SLC6A12P48065 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.3■□□□□ 0.68
SLC6A12P48065 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.3■□□□□ 0.68
SLC6A12P48065 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.3■□□□□ 0.68
SLC6A12P48065 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.3■□□□□ 0.68
SLC6A12P48065 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.3■□□□□ 0.68
SLC6A12P48065 MYC-209ENST00000641252 345 ntBASIC19.3■□□□□ 0.68
SLC6A12P48065 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.3■□□□□ 0.68
SLC6A12P48065 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.3■□□□□ 0.68
SLC6A12P48065 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC6A12P48065 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC6A12P48065 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.3■□□□□ 0.68
SLC6A12P48065 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SLC6A12P48065 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.3■□□□□ 0.68
SLC6A12P48065 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SLC6A12P48065 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.29■□□□□ 0.68
SLC6A12P48065 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.29■□□□□ 0.68
SLC6A12P48065 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC6A12P48065 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC6A12P48065 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC6A12P48065 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SLC6A12P48065 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.29■□□□□ 0.68
SLC6A12P48065 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC6A12P48065 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC6A12P48065 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC6A12P48065 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SLC6A12P48065 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.29■□□□□ 0.68
SLC6A12P48065 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.29■□□□□ 0.68
SLC6A12P48065 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.29■□□□□ 0.68
SLC6A12P48065 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SLC6A12P48065 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SLC6A12P48065 AC090192.1-201ENST00000517740 490 ntBASIC19.29■□□□□ 0.68
SLC6A12P48065 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.29■□□□□ 0.68
SLC6A12P48065 MIR4758-201ENST00000577688 71 ntBASIC19.29■□□□□ 0.68
SLC6A12P48065 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC6A12P48065 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SLC6A12P48065 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC6A12P48065 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC6A12P48065 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC6A12P48065 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.29■□□□□ 0.68
SLC6A12P48065 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC6A12P48065 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.28■□□□□ 0.68
SLC6A12P48065 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC6A12P48065 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SLC6A12P48065 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.28■□□□□ 0.68
SLC6A12P48065 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC6A12P48065 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC6A12P48065 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC6A12P48065 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SLC6A12P48065 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC6A12P48065 AL138781.1-201ENST00000566567 1274 ntBASIC19.28■□□□□ 0.68
SLC6A12P48065 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.28■□□□□ 0.68
SLC6A12P48065 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.28■□□□□ 0.68
SLC6A12P48065 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
SLC6A12P48065 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SLC6A12P48065 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC6A12P48065 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC6A12P48065 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
SLC6A12P48065 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.27■□□□□ 0.68
SLC6A12P48065 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms