Protein–RNA interactions for Protein: P47049

UBX6, UBX domain-containing protein 6, yeastyeast

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBX6P47049 tF(GAA)GtF(GAA)G 73 nt1.17□□□□□ -2.22
UBX6P47049 tF(GAA)H1tF(GAA)H1 73 nt1.17□□□□□ -2.22
UBX6P47049 tF(GAA)H2tF(GAA)H2 73 nt1.17□□□□□ -2.22
UBX6P47049 tF(GAA)MtF(GAA)M 73 nt1.17□□□□□ -2.22
UBX6P47049 tF(GAA)P1tF(GAA)P1 73 nt1.17□□□□□ -2.22
UBX6P47049 tF(GAA)P2tF(GAA)P2 73 nt1.17□□□□□ -2.22
UBX6P47049 YER053C-AYER053C-A 114 nt1.17□□□□□ -2.22
UBX6P47049 RPL26BYGR034W 384 nt1.17□□□□□ -2.22
UBX6P47049 YNL338WYNL338W 159 nt1.17□□□□□ -2.22
UBX6P47049 UTP20YBL004W 7482 nt1.16□□□□□ -2.22
UBX6P47049 YLR041WYLR041W 321 nt1.16□□□□□ -2.22
UBX6P47049 BFR2YDR299W 1605 nt1.15□□□□□ -2.23
UBX6P47049 YKL100W-AYKL100W-A 90 nt1.14□□□□□ -2.23
UBX6P47049 YOR381W-AYOR381W-A 168 nt1.14□□□□□ -2.23
UBX6P47049 snR190snR190 190 nt1.14□□□□□ -2.23
UBX6P47049 YDL073WYDL073W 2955 nt1.14□□□□□ -2.23
UBX6P47049 YIL020C-AYIL020C-A 339 nt1.13□□□□□ -2.23
UBX6P47049 SIP4YJL089W 2490 nt1.11□□□□□ -2.23
UBX6P47049 PRP42YDR235W 1635 nt1.11□□□□□ -2.23
UBX6P47049 NST1YNL091W 3723 nt1.1□□□□□ -2.23
UBX6P47049 YML002WYML002W 2214 nt1.1□□□□□ -2.23
UBX6P47049 DOP1YDR141C 5097 nt1.1□□□□□ -2.23
UBX6P47049 SEC8YPR055W 3198 nt1.08□□□□□ -2.24
UBX6P47049 RAD9YDR217C 3930 nt1.08□□□□□ -2.24
UBX6P47049 YPR160W-AYPR160W-A 81 nt1.07□□□□□ -2.24
UBX6P47049 PRP5YBR237W 2550 nt1.06□□□□□ -2.24
UBX6P47049 FYV10YIL097W 1551 nt1.06□□□□□ -2.24
UBX6P47049 YLR399W-AYLR399W-A 105 nt1.05□□□□□ -2.24
UBX6P47049 UTP8YGR128C 2142 nt1.04□□□□□ -2.24
UBX6P47049 YBL039C-AYBL039C-A 84 nt1.02□□□□□ -2.25
UBX6P47049 BUD3YCL014W 4911 nt1.02□□□□□ -2.25
UBX6P47049 SPT7YBR081C 3999 nt1.02□□□□□ -2.25
UBX6P47049 YDL007C-AYDL007C-A 258 nt1.01□□□□□ -2.25
UBX6P47049 YGL182CYGL182C 324 nt1.01□□□□□ -2.25
UBX6P47049 tN(GUU)QtN(GUU)Q 71 nt1□□□□□ -2.25
UBX6P47049 snR48snR48 113 nt1□□□□□ -2.25
UBX6P47049 Q0092Q0092 141 nt0.99□□□□□ -2.25
UBX6P47049 SNU13YEL026W 381 nt0.99□□□□□ -2.25
UBX6P47049 YOL014WYOL014W 375 nt0.99□□□□□ -2.25
UBX6P47049 YOR170WYOR170W 306 nt0.99□□□□□ -2.25
UBX6P47049 CHS6YJL099W 2241 nt0.99□□□□□ -2.25
UBX6P47049 TAH1YCR060W 336 nt0.98□□□□□ -2.25
UBX6P47049 YHR131W-AYHR131W-A 246 nt0.98□□□□□ -2.25
UBX6P47049 YBL053WYBL053W 375 nt0.98□□□□□ -2.25
UBX6P47049 YOR102WYOR102W 351 nt0.98□□□□□ -2.25
UBX6P47049 YJR029WYJR029W 5268 nt0.97□□□□□ -2.25
UBX6P47049 YPR137C-BYPR137C-B 5268 nt0.97□□□□□ -2.25
UBX6P47049 RKR1YMR247C 4689 nt0.97□□□□□ -2.25
UBX6P47049 RPM2YML091C 3609 nt0.97□□□□□ -2.25
UBX6P47049 YHL015W-AYHL015W-A 84 nt0.97□□□□□ -2.25
UBX6P47049 BIR1YJR089W 2865 nt0.97□□□□□ -2.25
UBX6P47049 ATP8Q0080 147 nt0.96□□□□□ -2.26
UBX6P47049 SCC2YDR180W 4482 nt0.95□□□□□ -2.26
UBX6P47049 YPR117WYPR117W 7470 nt0.94□□□□□ -2.26
UBX6P47049 OST4YDL232W 111 nt0.94□□□□□ -2.26
UBX6P47049 EMT1tM(CAU)D 73 nt0.94□□□□□ -2.26
UBX6P47049 EMT5tM(CAU)J1 73 nt0.94□□□□□ -2.26
UBX6P47049 EMT3tM(CAU)J2 73 nt0.94□□□□□ -2.26
UBX6P47049 EMT4tM(CAU)M 73 nt0.94□□□□□ -2.26
UBX6P47049 EMT2tM(CAU)O2 73 nt0.94□□□□□ -2.26
UBX6P47049 YIL142C-AYIL142C-A 333 nt0.94□□□□□ -2.26
UBX6P47049 YLR232WYLR232W 348 nt0.94□□□□□ -2.26
UBX6P47049 YGR164WYGR164W 336 nt0.93□□□□□ -2.26
UBX6P47049 YNL170WYNL170W 396 nt0.93□□□□□ -2.26
UBX6P47049 VAM6YDL077C 3150 nt0.93□□□□□ -2.26
UBX6P47049 tL(UAA)QtL(UAA)Q 85 nt0.92□□□□□ -2.26
UBX6P47049 YOR314W-AYOR314W-A 111 nt0.92□□□□□ -2.26
UBX6P47049 YSP1YHR155W 3687 nt0.9□□□□□ -2.27
UBX6P47049 YMR160WYMR160W 2451 nt0.89□□□□□ -2.27
UBX6P47049 SDH6YDR379C-A 240 nt0.88□□□□□ -2.27
UBX6P47049 BEM2YER155C 6504 nt0.86□□□□□ -2.27
UBX6P47049 YOR329W-AYOR329W-A 210 nt0.85□□□□□ -2.27
UBX6P47049 YPL060C-AYPL060C-A 3315 nt0.85□□□□□ -2.27
UBX6P47049 BEM3YPL115C 3387 nt0.84□□□□□ -2.27
UBX6P47049 YDR544CYDR544C 429 nt0.84□□□□□ -2.27
UBX6P47049 snR39BsnR39B 96 nt0.83□□□□□ -2.28
UBX6P47049 COG6YNL041C 2520 nt0.83□□□□□ -2.28
UBX6P47049 SEC1YDR164C 2175 nt0.82□□□□□ -2.28
UBX6P47049 YKL145W-AYKL145W-A 93 nt0.82□□□□□ -2.28
UBX6P47049 ULP2YIL031W 3105 nt0.81□□□□□ -2.28
UBX6P47049 tM(CAU)Q2tM(CAU)Q2 78 nt0.81□□□□□ -2.28
UBX6P47049 YJL127W-AYJL127W-A 117 nt0.81□□□□□ -2.28
UBX6P47049 BUL2YML111W 2763 nt0.81□□□□□ -2.28
UBX6P47049 YNL067W-BYNL067W-B 141 nt0.78□□□□□ -2.28
UBX6P47049 LTE1YAL024C 4308 nt0.77□□□□□ -2.29
UBX6P47049 YBR072C-AYBR072C-A 162 nt0.77□□□□□ -2.29
UBX6P47049 NNF2YGR089W 2811 nt0.76□□□□□ -2.29
UBX6P47049 GLG1YKR058W 1851 nt0.76□□□□□ -2.29
UBX6P47049 YDR210WYDR210W 228 nt0.76□□□□□ -2.29
UBX6P47049 YCR095W-AYCR095W-A 159 nt0.74□□□□□ -2.29
UBX6P47049 MYO1YHR023W 5787 nt0.74□□□□□ -2.29
UBX6P47049 YLL006W-AYLL006W-A 177 nt0.73□□□□□ -2.29
UBX6P47049 NIP1YMR309C 2439 nt0.72□□□□□ -2.29
UBX6P47049 YCL001W-BYCL001W-B 255 nt0.72□□□□□ -2.29
UBX6P47049 YOR192C-BYOR192C-B 5313 nt0.72□□□□□ -2.29
UBX6P47049 SOM1YEL059C-A 225 nt0.7□□□□□ -2.3
UBX6P47049 YGR146C-AYGR146C-A 162 nt0.7□□□□□ -2.3
UBX6P47049 RPS26AYGL189C 360 nt0.68□□□□□ -2.3
UBX6P47049 PET111YMR257C 2403 nt0.67□□□□□ -2.3
UBX6P47049 tT(AGU)BtT(AGU)B 73 nt0.67□□□□□ -2.3
Retrieved 100 of 7,029 protein–RNA pairs in 31.3 ms