Protein–RNA interactions for Protein: P47001

CIS3, Cell wall mannoprotein CIS3, yeastyeast

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CIS3P47001 YBL100W-BYBL100W-B 5313 nt0.26□□□□□ -2.37
CIS3P47001 YDR413CYDR413C 576 nt0.25□□□□□ -2.37
CIS3P47001 YJL197C-AYJL197C-A 282 nt0.25□□□□□ -2.37
CIS3P47001 ESP1YGR098C 4893 nt0.24□□□□□ -2.37
CIS3P47001 ATP6Q0085 780 nt0.24□□□□□ -2.37
CIS3P47001 YEL020C-BYEL020C-B 198 nt0.24□□□□□ -2.37
CIS3P47001 YHR175W-AYHR175W-A 150 nt0.24□□□□□ -2.37
CIS3P47001 ORC3YLL004W 1851 nt0.23□□□□□ -2.37
CIS3P47001 YCR022CYCR022C 345 nt0.23□□□□□ -2.37
CIS3P47001 HMRA1YCR097W 381 nt0.23□□□□□ -2.37
CIS3P47001 YER097WYER097W 330 nt0.23□□□□□ -2.37
CIS3P47001 YGL123C-AYGL123C-A 231 nt0.23□□□□□ -2.37
CIS3P47001 YGR069WYGR069W 336 nt0.23□□□□□ -2.37
CIS3P47001 YNL028WYNL028W 318 nt0.23□□□□□ -2.37
CIS3P47001 STE5YDR103W 2754 nt0.23□□□□□ -2.37
CIS3P47001 snR56snR56 88 nt0.22□□□□□ -2.37
CIS3P47001 YKL118WYKL118W 312 nt0.22□□□□□ -2.37
CIS3P47001 NNF2YGR089W 2811 nt0.21□□□□□ -2.38
CIS3P47001 snR74snR74 88 nt0.21□□□□□ -2.38
CIS3P47001 YDR371C-AYDR371C-A 105 nt0.21□□□□□ -2.38
CIS3P47001 tR(ACG)Q2tR(ACG)Q2 74 nt0.21□□□□□ -2.38
CIS3P47001 YLR120W-AYLR120W-A 102 nt0.21□□□□□ -2.38
CIS3P47001 RAD61YDR014W 1944 nt0.21□□□□□ -2.38
CIS3P47001 RPS26AYGL189C 360 nt0.2□□□□□ -2.38
CIS3P47001 BLI1YKL061W 342 nt0.2□□□□□ -2.38
CIS3P47001 YOR072W-BYOR072W-B 162 nt0.2□□□□□ -2.38
CIS3P47001 MLP1YKR095W 5628 nt0.19□□□□□ -2.38
CIS3P47001 YER053C-AYER053C-A 114 nt0.18□□□□□ -2.38
CIS3P47001 YNL146WYNL146W 303 nt0.18□□□□□ -2.38
CIS3P47001 RCO1YMR075W 2055 nt0.18□□□□□ -2.38
CIS3P47001 YGL052WYGL052W 306 nt0.17□□□□□ -2.38
CIS3P47001 YLR041WYLR041W 321 nt0.17□□□□□ -2.38
CIS3P47001 PRP39YML046W 1890 nt0.17□□□□□ -2.38
CIS3P47001 THO2YNL139C 4794 nt0.17□□□□□ -2.38
CIS3P47001 TAH1YCR060W 336 nt0.16□□□□□ -2.38
CIS3P47001 COX12YLR038C 252 nt0.16□□□□□ -2.38
CIS3P47001 NIP1YMR309C 2439 nt0.16□□□□□ -2.38
CIS3P47001 YNL054W-BYNL054W-B 5250 nt0.15□□□□□ -2.39
CIS3P47001 SNU13YEL026W 381 nt0.15□□□□□ -2.39
CIS3P47001 YHR131W-AYHR131W-A 246 nt0.15□□□□□ -2.39
CIS3P47001 RPL39YJL189W 156 nt0.15□□□□□ -2.39
CIS3P47001 YLL006W-AYLL006W-A 177 nt0.15□□□□□ -2.39
CIS3P47001 YMR172C-AYMR172C-A 384 nt0.15□□□□□ -2.39
CIS3P47001 YOL013W-AYOL013W-A 192 nt0.15□□□□□ -2.39
CIS3P47001 YCR038W-AYCR038W-A 126 nt0.14□□□□□ -2.39
CIS3P47001 YDR366CYDR366C 399 nt0.13□□□□□ -2.39
CIS3P47001 YKL100W-AYKL100W-A 90 nt0.13□□□□□ -2.39
CIS3P47001 YNL277W-AYNL277W-A 189 nt0.12□□□□□ -2.39
CIS3P47001 YPR010C-AYPR010C-A 219 nt0.12□□□□□ -2.39
CIS3P47001 MLP2YIL149C 5040 nt0.11□□□□□ -2.39
CIS3P47001 YBR072C-AYBR072C-A 162 nt0.1□□□□□ -2.39
CIS3P47001 snR45snR45 172 nt0.1□□□□□ -2.39
CIS3P47001 YEL073CYEL073C 324 nt0.09□□□□□ -2.4
CIS3P47001 YIL002W-AYIL002W-A 210 nt0.09□□□□□ -2.4
CIS3P47001 YOR008C-AYOR008C-A 225 nt0.09□□□□□ -2.4
CIS3P47001 YKU70YMR284W 1809 nt0.07□□□□□ -2.4
CIS3P47001 YIR030W-AYIR030W-A 384 nt0.06□□□□□ -2.4
CIS3P47001 YDR524W-CYDR524W-C 90 nt0.05□□□□□ -2.4
CIS3P47001 YDR544CYDR544C 429 nt0.05□□□□□ -2.4
CIS3P47001 APQ12YIL040W 417 nt0.05□□□□□ -2.4
CIS3P47001 YLR232WYLR232W 348 nt0.05□□□□□ -2.4
CIS3P47001 SDH6YDR379C-A 240 nt0.04□□□□□ -2.4
CIS3P47001 YMR158W-BYMR158W-B 321 nt0.04□□□□□ -2.4
CIS3P47001 YOR186C-AYOR186C-A 210 nt0.04□□□□□ -2.4
CIS3P47001 CSE1YGL238W 2883 nt0.04□□□□□ -2.4
CIS3P47001 tF(GAA)QtF(GAA)Q 75 nt0.03□□□□□ -2.4
CIS3P47001 YBR182C-AYBR182C-A 195 nt0.03□□□□□ -2.4
CIS3P47001 SOV1YMR066W 2697 nt0.03□□□□□ -2.4
CIS3P47001 YGL041CYGL041C 204 nt0.01□□□□□ -2.41
CIS3P47001 snR65snR65 100 nt0□□□□□ -2.41
CIS3P47001 YBR131C-AYBR131C-A 90 nt0□□□□□ -2.41
CIS3P47001 GLG1YKR058W 1851 nt-0.01□□□□□ -2.41
CIS3P47001 snR55snR55 98 nt-0.02□□□□□ -2.41
CIS3P47001 snR49snR49 165 nt-0.02□□□□□ -2.41
CIS3P47001 YBL039C-AYBL039C-A 84 nt-0.03□□□□□ -2.41
CIS3P47001 YPL152W-AYPL152W-A 99 nt-0.03□□□□□ -2.41
CIS3P47001 YBR099CYBR099C 384 nt-0.03□□□□□ -2.41
CIS3P47001 YEL014CYEL014C 306 nt-0.04□□□□□ -2.42
CIS3P47001 COG6YNL041C 2520 nt-0.04□□□□□ -2.42
CIS3P47001 YER181CYER181C 324 nt-0.05□□□□□ -2.42
CIS3P47001 EST1YLR233C 2100 nt-0.06□□□□□ -2.42
CIS3P47001 YML099W-AYML099W-A 330 nt-0.07□□□□□ -2.42
CIS3P47001 YOR231C-AYOR231C-A 201 nt-0.07□□□□□ -2.42
CIS3P47001 YGL182CYGL182C 324 nt-0.08□□□□□ -2.42
CIS3P47001 YJL182CYJL182C 318 nt-0.08□□□□□ -2.42
CIS3P47001 YOL155W-AYOL155W-A 135 nt-0.08□□□□□ -2.42
CIS3P47001 snR128snR128 126 nt-0.08□□□□□ -2.42
CIS3P47001 YNL097C-BYNL097C-B 123 nt-0.1□□□□□ -2.43
CIS3P47001 YOR302WYOR302W 78 nt-0.1□□□□□ -2.43
CIS3P47001 YOR314W-AYOR314W-A 111 nt-0.11□□□□□ -2.43
CIS3P47001 snR8snR8 190 nt-0.12□□□□□ -2.43
CIS3P47001 YPL060C-AYPL060C-A 3315 nt-0.14□□□□□ -2.43
CIS3P47001 snR80snR80 171 nt-0.15□□□□□ -2.43
CIS3P47001 TFB5YDR079C-A 219 nt-0.15□□□□□ -2.43
CIS3P47001 YDR210WYDR210W 228 nt-0.15□□□□□ -2.43
CIS3P47001 YGL188C-AYGL188C-A 141 nt-0.15□□□□□ -2.43
CIS3P47001 YOR381W-AYOR381W-A 168 nt-0.15□□□□□ -2.43
CIS3P47001 Q0142Q0142 177 nt-0.18□□□□□ -2.44
CIS3P47001 YGR164WYGR164W 336 nt-0.19□□□□□ -2.44
CIS3P47001 tM(CAU)Q2tM(CAU)Q2 78 nt-0.21□□□□□ -2.44
Retrieved 100 of 7,029 protein–RNA pairs in 13.2 ms