Protein–RNA interactions for Protein: P40339

RFC4, Replication factor C subunit 4, yeastyeast

Known RBP Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RFC4P40339 CSE2YNR010W 450 nt-0.47□□□□□ -2.48
RFC4P40339 RAD61YDR014W 1944 nt-0.48□□□□□ -2.49
RFC4P40339 snR189snR189 189 nt-0.48□□□□□ -2.49
RFC4P40339 YLR202CYLR202C 327 nt-0.5□□□□□ -2.49
RFC4P40339 EST1YLR233C 2100 nt-0.5□□□□□ -2.49
RFC4P40339 YOR121CYOR121C 306 nt-0.52□□□□□ -2.49
RFC4P40339 YJL197C-AYJL197C-A 282 nt-0.54□□□□□ -2.5
RFC4P40339 SEC10YLR166C 2616 nt-0.55□□□□□ -2.5
RFC4P40339 YGR069WYGR069W 336 nt-0.55□□□□□ -2.5
RFC4P40339 YER137W-AYER137W-A 306 nt-0.56□□□□□ -2.5
RFC4P40339 AGA2YGL032C 264 nt-0.56□□□□□ -2.5
RFC4P40339 YBR285WYBR285W 435 nt-0.56□□□□□ -2.5
RFC4P40339 URB1YKL014C 5295 nt-0.56□□□□□ -2.5
RFC4P40339 YMR193C-AYMR193C-A 387 nt-0.57□□□□□ -2.5
RFC4P40339 YPR170W-AYPR170W-A 186 nt-0.57□□□□□ -2.5
RFC4P40339 YDR048CYDR048C 315 nt-0.58□□□□□ -2.5
RFC4P40339 YER079WYER079W 633 nt-0.58□□□□□ -2.5
RFC4P40339 YLL019W-AYLL019W-A 93 nt-0.58□□□□□ -2.5
RFC4P40339 YMR001C-AYMR001C-A 231 nt-0.58□□□□□ -2.5
RFC4P40339 YER053C-AYER053C-A 114 nt-0.6□□□□□ -2.51
RFC4P40339 tW(UCA)QtW(UCA)Q 74 nt-0.6□□□□□ -2.51
RFC4P40339 YIR030W-AYIR030W-A 384 nt-0.61□□□□□ -2.51
RFC4P40339 SDH6YDR379C-A 240 nt-0.62□□□□□ -2.51
RFC4P40339 YAL016C-BYAL016C-B 186 nt-0.62□□□□□ -2.51
RFC4P40339 YPR016W-AYPR016W-A 261 nt-0.63□□□□□ -2.51
RFC4P40339 BIL1YOR304C-A 231 nt-0.64□□□□□ -2.51
RFC4P40339 RPM2YML091C 3609 nt-0.64□□□□□ -2.51
RFC4P40339 YLR264C-AYLR264C-A 117 nt-0.65□□□□□ -2.51
RFC4P40339 YIL071W-AYIL071W-A 477 nt-0.66□□□□□ -2.52
RFC4P40339 YNL067W-BYNL067W-B 141 nt-0.67□□□□□ -2.52
RFC4P40339 YNL324WYNL324W 396 nt-0.68□□□□□ -2.52
RFC4P40339 YIL002W-AYIL002W-A 210 nt-0.69□□□□□ -2.52
RFC4P40339 YOR072W-BYOR072W-B 162 nt-0.69□□□□□ -2.52
RFC4P40339 snR60snR60 104 nt-0.7□□□□□ -2.52
RFC4P40339 YDL007C-AYDL007C-A 258 nt-0.7□□□□□ -2.52
RFC4P40339 YHL009W-BYHL009W-B 5409 nt-0.71□□□□□ -2.52
RFC4P40339 HMRA1YCR097W 381 nt-0.71□□□□□ -2.52
RFC4P40339 APQ12YIL040W 417 nt-0.71□□□□□ -2.52
RFC4P40339 YAL063C-AYAL063C-A 291 nt-0.71□□□□□ -2.52
RFC4P40339 YDR544CYDR544C 429 nt-0.73□□□□□ -2.53
RFC4P40339 YPL060C-AYPL060C-A 3315 nt-0.73□□□□□ -2.53
RFC4P40339 HTL1YCR020W-B 237 nt-0.74□□□□□ -2.53
RFC4P40339 YGR035CYGR035C 351 nt-0.74□□□□□ -2.53
RFC4P40339 YAL068W-AYAL068W-A 255 nt-0.74□□□□□ -2.53
RFC4P40339 tA(UGC)QtA(UGC)Q 76 nt-0.77□□□□□ -2.53
RFC4P40339 YIL032CYIL032C 357 nt-0.77□□□□□ -2.53
RFC4P40339 YNL028WYNL028W 318 nt-0.78□□□□□ -2.53
RFC4P40339 PAU9YBL108C-A 129 nt-0.78□□□□□ -2.53
RFC4P40339 snR36snR36 182 nt-0.79□□□□□ -2.54
RFC4P40339 COG6YNL041C 2520 nt-0.79□□□□□ -2.54
RFC4P40339 YCR038W-AYCR038W-A 126 nt-0.8□□□□□ -2.54
RFC4P40339 YML100W-AYML100W-A 174 nt-0.81□□□□□ -2.54
RFC4P40339 snR33snR33 183 nt-0.82□□□□□ -2.54
RFC4P40339 YGL149WYGL149W 306 nt-0.83□□□□□ -2.54
RFC4P40339 YOR015WYOR015W 360 nt-0.85□□□□□ -2.55
RFC4P40339 YLR120W-AYLR120W-A 102 nt-0.86□□□□□ -2.55
RFC4P40339 YOR293C-AYOR293C-A 150 nt-0.86□□□□□ -2.55
RFC4P40339 YJR157WYJR157W 363 nt-0.87□□□□□ -2.55
RFC4P40339 YOR314W-AYOR314W-A 111 nt-0.9□□□□□ -2.55
RFC4P40339 YGL052WYGL052W 306 nt-0.91□□□□□ -2.56
RFC4P40339 tT(UGU)G1tT(UGU)G1 72 nt-0.91□□□□□ -2.56
RFC4P40339 tT(UGU)G2tT(UGU)G2 72 nt-0.91□□□□□ -2.56
RFC4P40339 tT(UGU)PtT(UGU)P 72 nt-0.91□□□□□ -2.56
RFC4P40339 snR74snR74 88 nt-0.92□□□□□ -2.56
RFC4P40339 YBL039C-AYBL039C-A 84 nt-0.92□□□□□ -2.56
RFC4P40339 YDR102CYDR102C 333 nt-0.93□□□□□ -2.56
RFC4P40339 YDR183C-AYDR183C-A 258 nt-0.93□□□□□ -2.56
RFC4P40339 YJL077W-AYJL077W-A 87 nt-0.93□□□□□ -2.56
RFC4P40339 YLR154W-FYLR154W-F 141 nt-0.94□□□□□ -2.56
RFC4P40339 YML099W-AYML099W-A 330 nt-0.94□□□□□ -2.56
RFC4P40339 ATP6Q0085 780 nt-0.95□□□□□ -2.56
RFC4P40339 Q0017Q0017 162 nt-0.95□□□□□ -2.56
RFC4P40339 tQ(UUG)QtQ(UUG)Q 76 nt-0.96□□□□□ -2.56
RFC4P40339 YJL182CYJL182C 318 nt-0.96□□□□□ -2.56
RFC4P40339 YAF9YNL107W 681 nt-0.96□□□□□ -2.56
RFC4P40339 YPR010C-AYPR010C-A 219 nt-0.97□□□□□ -2.56
RFC4P40339 YMR172C-AYMR172C-A 384 nt-0.98□□□□□ -2.57
RFC4P40339 snR49snR49 165 nt-0.98□□□□□ -2.57
RFC4P40339 YOR170WYOR170W 306 nt-1.04□□□□□ -2.58
RFC4P40339 YGL182CYGL182C 324 nt-1.05□□□□□ -2.58
RFC4P40339 YNR077CYNR077C 255 nt-1.05□□□□□ -2.58
RFC4P40339 YFL032WYFL032W 321 nt-1.08□□□□□ -2.58
RFC4P40339 snR69snR69 101 nt-1.09□□□□□ -2.58
RFC4P40339 YDR157WYDR157W 402 nt-1.1□□□□□ -2.59
RFC4P40339 snR161snR161 161 nt-1.1□□□□□ -2.59
RFC4P40339 YPL038W-AYPL038W-A 192 nt-1.1□□□□□ -2.59
RFC4P40339 snR50snR50 90 nt-1.11□□□□□ -2.59
RFC4P40339 YNL266WYNL266W 420 nt-1.12□□□□□ -2.59
RFC4P40339 YBR223W-AYBR223W-A 120 nt-1.12□□□□□ -2.59
RFC4P40339 YPR197CYPR197C 564 nt-1.13□□□□□ -2.59
RFC4P40339 YER090C-AYER090C-A 90 nt-1.14□□□□□ -2.59
RFC4P40339 YGL041CYGL041C 204 nt-1.14□□□□□ -2.59
RFC4P40339 YLR222C-AYLR222C-A 231 nt-1.14□□□□□ -2.59
RFC4P40339 YOR008C-AYOR008C-A 225 nt-1.14□□□□□ -2.59
RFC4P40339 YBR182C-AYBR182C-A 195 nt-1.16□□□□□ -2.6
RFC4P40339 JLP2YMR132C 627 nt-1.18□□□□□ -2.6
RFC4P40339 tP(UGG)QtP(UGG)Q 72 nt-1.19□□□□□ -2.6
RFC4P40339 RDS3YPR094W 324 nt-1.19□□□□□ -2.6
RFC4P40339 YER097WYER097W 330 nt-1.2□□□□□ -2.6
RFC4P40339 tM(CAU)Q2tM(CAU)Q2 78 nt-1.2□□□□□ -2.6
Retrieved 100 of 7,029 protein–RNA pairs in 29 ms