Protein–RNA interactions for Protein: P40088

FTR1, Plasma membrane iron permease, yeastyeast

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
FTR1P40088 YOR102WYOR102W 351 nt1.34□□□□□ -2.19
FTR1P40088 RAD9YDR217C 3930 nt1.33□□□□□ -2.2
FTR1P40088 SDH6YDR379C-A 240 nt1.32□□□□□ -2.2
FTR1P40088 YBL053WYBL053W 375 nt1.32□□□□□ -2.2
FTR1P40088 NUP157YER105C 4176 nt1.31□□□□□ -2.2
FTR1P40088 YFR012W-AYFR012W-A 87 nt1.31□□□□□ -2.2
FTR1P40088 snR190snR190 190 nt1.31□□□□□ -2.2
FTR1P40088 YIL020C-AYIL020C-A 339 nt1.3□□□□□ -2.2
FTR1P40088 STB6YKL072W 2301 nt1.29□□□□□ -2.2
FTR1P40088 tV(UAC)BtV(UAC)B 74 nt1.29□□□□□ -2.2
FTR1P40088 tV(UAC)DtV(UAC)D 74 nt1.29□□□□□ -2.2
FTR1P40088 YGL182CYGL182C 324 nt1.28□□□□□ -2.2
FTR1P40088 snR48snR48 113 nt1.28□□□□□ -2.2
FTR1P40088 NST1YNL091W 3723 nt1.28□□□□□ -2.21
FTR1P40088 CDC39YCR093W 6327 nt1.27□□□□□ -2.21
FTR1P40088 YOR314W-AYOR314W-A 111 nt1.27□□□□□ -2.21
FTR1P40088 FYV10YIL097W 1551 nt1.26□□□□□ -2.21
FTR1P40088 SIP4YJL089W 2490 nt1.26□□□□□ -2.21
FTR1P40088 ASE1YOR058C 2658 nt1.26□□□□□ -2.21
FTR1P40088 YLR041WYLR041W 321 nt1.25□□□□□ -2.21
FTR1P40088 SEC8YPR055W 3198 nt1.24□□□□□ -2.21
FTR1P40088 TAH1YCR060W 336 nt1.24□□□□□ -2.21
FTR1P40088 YBL039C-AYBL039C-A 84 nt1.24□□□□□ -2.21
FTR1P40088 CHS6YJL099W 2241 nt1.22□□□□□ -2.21
FTR1P40088 SPT7YBR081C 3999 nt1.21□□□□□ -2.22
FTR1P40088 YLR232WYLR232W 348 nt1.2□□□□□ -2.22
FTR1P40088 YNL284C-BYNL284C-B 5268 nt1.2□□□□□ -2.22
FTR1P40088 KAP120YPL125W 3099 nt1.19□□□□□ -2.22
FTR1P40088 PRP16YKR086W 3216 nt1.19□□□□□ -2.22
FTR1P40088 tL(UAA)QtL(UAA)Q 85 nt1.19□□□□□ -2.22
FTR1P40088 YLR399W-AYLR399W-A 105 nt1.19□□□□□ -2.22
FTR1P40088 MYO1YHR023W 5787 nt1.18□□□□□ -2.22
FTR1P40088 VAM6YDL077C 3150 nt1.17□□□□□ -2.22
FTR1P40088 YPR160W-AYPR160W-A 81 nt1.16□□□□□ -2.22
FTR1P40088 YHR131W-AYHR131W-A 246 nt1.14□□□□□ -2.23
FTR1P40088 YOR329W-AYOR329W-A 210 nt1.14□□□□□ -2.23
FTR1P40088 BEM3YPL115C 3387 nt1.13□□□□□ -2.23
FTR1P40088 STF2YGR008C 255 nt1.11□□□□□ -2.23
FTR1P40088 QCR9YGR183C 201 nt1.11□□□□□ -2.23
FTR1P40088 YDR544CYDR544C 429 nt1.1□□□□□ -2.23
FTR1P40088 tM(CAU)Q2tM(CAU)Q2 78 nt1.1□□□□□ -2.23
FTR1P40088 tN(GUU)QtN(GUU)Q 71 nt1.1□□□□□ -2.23
FTR1P40088 EMT1tM(CAU)D 73 nt1.09□□□□□ -2.23
FTR1P40088 EMT5tM(CAU)J1 73 nt1.09□□□□□ -2.23
FTR1P40088 EMT3tM(CAU)J2 73 nt1.09□□□□□ -2.23
FTR1P40088 EMT4tM(CAU)M 73 nt1.09□□□□□ -2.23
FTR1P40088 EMT2tM(CAU)O2 73 nt1.09□□□□□ -2.23
FTR1P40088 YNL067W-BYNL067W-B 141 nt1.09□□□□□ -2.23
FTR1P40088 BUD3YCL014W 4911 nt1.08□□□□□ -2.24
FTR1P40088 UBP3YER151C 2739 nt1.08□□□□□ -2.24
FTR1P40088 YCL001W-BYCL001W-B 255 nt1.08□□□□□ -2.24
FTR1P40088 YSP1YHR155W 3687 nt1.08□□□□□ -2.24
FTR1P40088 YDL073WYDL073W 2955 nt1.07□□□□□ -2.24
FTR1P40088 HUG1YML058W-A 207 nt1.07□□□□□ -2.24
FTR1P40088 SCC2YDR180W 4482 nt1.06□□□□□ -2.24
FTR1P40088 YJR029WYJR029W 5268 nt1.05□□□□□ -2.24
FTR1P40088 YPR137C-BYPR137C-B 5268 nt1.05□□□□□ -2.24
FTR1P40088 BEM2YER155C 6504 nt1.05□□□□□ -2.24
FTR1P40088 snR39BsnR39B 96 nt1.04□□□□□ -2.24
FTR1P40088 COG6YNL041C 2520 nt1.04□□□□□ -2.24
FTR1P40088 RPM2YML091C 3609 nt1.03□□□□□ -2.24
FTR1P40088 DOP1YDR141C 5097 nt1.03□□□□□ -2.24
FTR1P40088 YCR095W-AYCR095W-A 159 nt1.02□□□□□ -2.25
FTR1P40088 OST4YDL232W 111 nt1.02□□□□□ -2.25
FTR1P40088 Q0143Q0143 153 nt1.02□□□□□ -2.25
FTR1P40088 YPR117WYPR117W 7470 nt1.01□□□□□ -2.25
FTR1P40088 SOM1YEL059C-A 225 nt1□□□□□ -2.25
FTR1P40088 YDR210WYDR210W 228 nt0.99□□□□□ -2.25
FTR1P40088 YJL127W-AYJL127W-A 117 nt0.98□□□□□ -2.25
FTR1P40088 YBR072C-AYBR072C-A 162 nt0.98□□□□□ -2.25
FTR1P40088 YBR099CYBR099C 384 nt0.96□□□□□ -2.26
FTR1P40088 GLG1YKR058W 1851 nt0.96□□□□□ -2.26
FTR1P40088 YGR146C-AYGR146C-A 162 nt0.95□□□□□ -2.26
FTR1P40088 PAU24YBR301W 363 nt0.95□□□□□ -2.26
FTR1P40088 ULP2YIL031W 3105 nt0.95□□□□□ -2.26
FTR1P40088 SEC1YDR164C 2175 nt0.94□□□□□ -2.26
FTR1P40088 YIL071W-AYIL071W-A 477 nt0.94□□□□□ -2.26
FTR1P40088 RKR1YMR247C 4689 nt0.94□□□□□ -2.26
FTR1P40088 snR85snR85 171 nt0.9□□□□□ -2.27
FTR1P40088 YNL205CYNL205C 423 nt0.9□□□□□ -2.27
FTR1P40088 YIL142C-AYIL142C-A 333 nt0.89□□□□□ -2.27
FTR1P40088 YLL006W-AYLL006W-A 177 nt0.89□□□□□ -2.27
FTR1P40088 NNF2YGR089W 2811 nt0.89□□□□□ -2.27
FTR1P40088 LTE1YAL024C 4308 nt0.86□□□□□ -2.27
FTR1P40088 CSE1YGL238W 2883 nt0.83□□□□□ -2.28
FTR1P40088 BIR1YJR089W 2865 nt0.82□□□□□ -2.28
FTR1P40088 PMP2YEL017C-A 132 nt0.81□□□□□ -2.28
FTR1P40088 PET111YMR257C 2403 nt0.8□□□□□ -2.28
FTR1P40088 YOR192C-BYOR192C-B 5313 nt0.78□□□□□ -2.28
FTR1P40088 NIP1YMR309C 2439 nt0.78□□□□□ -2.28
FTR1P40088 tT(AGU)BtT(AGU)B 73 nt0.77□□□□□ -2.29
FTR1P40088 tT(AGU)CtT(AGU)C 73 nt0.77□□□□□ -2.29
FTR1P40088 tT(AGU)DtT(AGU)D 73 nt0.77□□□□□ -2.29
FTR1P40088 tT(AGU)HtT(AGU)H 73 nt0.77□□□□□ -2.29
FTR1P40088 tT(AGU)I1tT(AGU)I1 73 nt0.77□□□□□ -2.29
FTR1P40088 tT(AGU)I2tT(AGU)I2 73 nt0.77□□□□□ -2.29
FTR1P40088 tT(AGU)JtT(AGU)J 73 nt0.77□□□□□ -2.29
FTR1P40088 tT(AGU)N1tT(AGU)N1 73 nt0.77□□□□□ -2.29
FTR1P40088 tT(AGU)N2tT(AGU)N2 73 nt0.77□□□□□ -2.29
FTR1P40088 tT(AGU)O1tT(AGU)O1 73 nt0.77□□□□□ -2.29
Retrieved 100 of 7,029 protein–RNA pairs in 39.4 ms