Protein–RNA interactions for Protein: P39706

SWD1, COMPASS component SWD1, yeastyeast

Predictions only

Length 426 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SWD1P39706 YLR041WYLR041W 321 nt1.06□□□□□ -2.24
SWD1P39706 YPR160W-AYPR160W-A 81 nt1.06□□□□□ -2.24
SWD1P39706 PRP42YDR235W 1635 nt1.06□□□□□ -2.24
SWD1P39706 SCC2YDR180W 4482 nt1.05□□□□□ -2.24
SWD1P39706 YJL150WYJL150W 303 nt1.04□□□□□ -2.24
SWD1P39706 PRP5YBR237W 2550 nt1.04□□□□□ -2.24
SWD1P39706 YGR130CYGR130C 2451 nt1.03□□□□□ -2.25
SWD1P39706 tV(UAC)BtV(UAC)B 74 nt1.02□□□□□ -2.25
SWD1P39706 tV(UAC)DtV(UAC)D 74 nt1.02□□□□□ -2.25
SWD1P39706 YLR466C-BYLR466C-B 117 nt1.01□□□□□ -2.25
SWD1P39706 PRP39YML046W 1890 nt1.01□□□□□ -2.25
SWD1P39706 LAA1YJL207C 6045 nt1.01□□□□□ -2.25
SWD1P39706 TRS65YGR166W 1683 nt1□□□□□ -2.25
SWD1P39706 Q0032Q0032 291 nt0.99□□□□□ -2.25
SWD1P39706 YNL198CYNL198C 303 nt0.99□□□□□ -2.25
SWD1P39706 UBP3YER151C 2739 nt0.98□□□□□ -2.25
SWD1P39706 YPR117WYPR117W 7470 nt0.97□□□□□ -2.25
SWD1P39706 YGR151CYGR151C 336 nt0.97□□□□□ -2.25
SWD1P39706 IML1YJR138W 4755 nt0.97□□□□□ -2.25
SWD1P39706 SIP4YJL089W 2490 nt0.97□□□□□ -2.25
SWD1P39706 YDL073WYDL073W 2955 nt0.96□□□□□ -2.26
SWD1P39706 YHR131W-AYHR131W-A 246 nt0.96□□□□□ -2.26
SWD1P39706 BUD3YCL014W 4911 nt0.96□□□□□ -2.26
SWD1P39706 YGL007C-AYGL007C-A 87 nt0.95□□□□□ -2.26
SWD1P39706 tN(GUU)QtN(GUU)Q 71 nt0.95□□□□□ -2.26
SWD1P39706 CHS6YJL099W 2241 nt0.95□□□□□ -2.26
SWD1P39706 TAH1YCR060W 336 nt0.94□□□□□ -2.26
SWD1P39706 YLR232WYLR232W 348 nt0.94□□□□□ -2.26
SWD1P39706 RKR1YMR247C 4689 nt0.93□□□□□ -2.26
SWD1P39706 YOR381W-AYOR381W-A 168 nt0.93□□□□□ -2.26
SWD1P39706 BEM3YPL115C 3387 nt0.93□□□□□ -2.26
SWD1P39706 YSP1YHR155W 3687 nt0.93□□□□□ -2.26
SWD1P39706 OST4YDL232W 111 nt0.92□□□□□ -2.26
SWD1P39706 SNU13YEL026W 381 nt0.92□□□□□ -2.26
SWD1P39706 YGL182CYGL182C 324 nt0.92□□□□□ -2.26
SWD1P39706 YBL039C-AYBL039C-A 84 nt0.91□□□□□ -2.26
SWD1P39706 LTE1YAL024C 4308 nt0.88□□□□□ -2.27
SWD1P39706 YOR225WYOR225W 330 nt0.87□□□□□ -2.27
SWD1P39706 PAU24YBR301W 363 nt0.87□□□□□ -2.27
SWD1P39706 SEC1YDR164C 2175 nt0.87□□□□□ -2.27
SWD1P39706 YJL127W-AYJL127W-A 117 nt0.85□□□□□ -2.27
SWD1P39706 YOR170WYOR170W 306 nt0.85□□□□□ -2.27
SWD1P39706 STF2YGR008C 255 nt0.84□□□□□ -2.27
SWD1P39706 DOP1YDR141C 5097 nt0.84□□□□□ -2.28
SWD1P39706 YNL338WYNL338W 159 nt0.83□□□□□ -2.28
SWD1P39706 HUG1YML058W-A 207 nt0.82□□□□□ -2.28
SWD1P39706 RPM2YML091C 3609 nt0.81□□□□□ -2.28
SWD1P39706 YHL015W-AYHL015W-A 84 nt0.81□□□□□ -2.28
SWD1P39706 snR48snR48 113 nt0.81□□□□□ -2.28
SWD1P39706 YDR544CYDR544C 429 nt0.8□□□□□ -2.28
SWD1P39706 YOR102WYOR102W 351 nt0.79□□□□□ -2.28
SWD1P39706 NNF2YGR089W 2811 nt0.79□□□□□ -2.28
SWD1P39706 YBR072C-AYBR072C-A 162 nt0.77□□□□□ -2.29
SWD1P39706 ULP2YIL031W 3105 nt0.77□□□□□ -2.29
SWD1P39706 PET111YMR257C 2403 nt0.76□□□□□ -2.29
SWD1P39706 YLL006W-AYLL006W-A 177 nt0.76□□□□□ -2.29
SWD1P39706 COG6YNL041C 2520 nt0.75□□□□□ -2.29
SWD1P39706 YOR314W-AYOR314W-A 111 nt0.75□□□□□ -2.29
SWD1P39706 GLG1YKR058W 1851 nt0.75□□□□□ -2.29
SWD1P39706 YMR272W-AYMR272W-A 114 nt0.74□□□□□ -2.29
SWD1P39706 YPR159C-AYPR159C-A 102 nt0.74□□□□□ -2.29
SWD1P39706 YLR294CYLR294C 330 nt0.73□□□□□ -2.29
SWD1P39706 SDH6YDR379C-A 240 nt0.72□□□□□ -2.29
SWD1P39706 tM(CAU)Q2tM(CAU)Q2 78 nt0.72□□□□□ -2.29
SWD1P39706 YOR329W-AYOR329W-A 210 nt0.71□□□□□ -2.3
SWD1P39706 YOR192C-BYOR192C-B 5313 nt0.7□□□□□ -2.3
SWD1P39706 MLP1YKR095W 5628 nt0.7□□□□□ -2.3
SWD1P39706 YDL007C-AYDL007C-A 258 nt0.69□□□□□ -2.3
SWD1P39706 tL(UAA)QtL(UAA)Q 85 nt0.68□□□□□ -2.3
SWD1P39706 PAU12YGR294W 363 nt0.68□□□□□ -2.3
SWD1P39706 NIP1YMR309C 2439 nt0.68□□□□□ -2.3
SWD1P39706 QCR9YGR183C 201 nt0.66□□□□□ -2.3
SWD1P39706 YBL053WYBL053W 375 nt0.66□□□□□ -2.3
SWD1P39706 UTP10YJL109C 5310 nt0.65□□□□□ -2.3
SWD1P39706 YDR210WYDR210W 228 nt0.65□□□□□ -2.31
SWD1P39706 YDR371C-AYDR371C-A 105 nt0.65□□□□□ -2.31
SWD1P39706 RPS26AYGL189C 360 nt0.65□□□□□ -2.31
SWD1P39706 snR39BsnR39B 96 nt0.63□□□□□ -2.31
SWD1P39706 BUL2YML111W 2763 nt0.63□□□□□ -2.31
SWD1P39706 UTP20YBL004W 7482 nt0.62□□□□□ -2.31
SWD1P39706 CSE1YGL238W 2883 nt0.62□□□□□ -2.31
SWD1P39706 tT(AGU)BtT(AGU)B 73 nt0.61□□□□□ -2.31
SWD1P39706 tT(AGU)CtT(AGU)C 73 nt0.61□□□□□ -2.31
SWD1P39706 tT(AGU)DtT(AGU)D 73 nt0.61□□□□□ -2.31
SWD1P39706 tT(AGU)HtT(AGU)H 73 nt0.61□□□□□ -2.31
SWD1P39706 tT(AGU)I1tT(AGU)I1 73 nt0.61□□□□□ -2.31
SWD1P39706 tT(AGU)I2tT(AGU)I2 73 nt0.61□□□□□ -2.31
SWD1P39706 tT(AGU)JtT(AGU)J 73 nt0.61□□□□□ -2.31
SWD1P39706 tT(AGU)N1tT(AGU)N1 73 nt0.61□□□□□ -2.31
SWD1P39706 tT(AGU)N2tT(AGU)N2 73 nt0.61□□□□□ -2.31
SWD1P39706 tT(AGU)O1tT(AGU)O1 73 nt0.61□□□□□ -2.31
SWD1P39706 tT(AGU)O2tT(AGU)O2 73 nt0.61□□□□□ -2.31
SWD1P39706 YNL067W-BYNL067W-B 141 nt0.61□□□□□ -2.31
SWD1P39706 SBH1YER087C-B 249 nt0.6□□□□□ -2.31
SWD1P39706 YIL142C-AYIL142C-A 333 nt0.59□□□□□ -2.31
SWD1P39706 YGR146C-AYGR146C-A 162 nt0.58□□□□□ -2.32
SWD1P39706 tF(GAA)BtF(GAA)B 73 nt0.57□□□□□ -2.32
SWD1P39706 tF(GAA)FtF(GAA)F 73 nt0.57□□□□□ -2.32
SWD1P39706 tF(GAA)GtF(GAA)G 73 nt0.57□□□□□ -2.32
SWD1P39706 tF(GAA)H1tF(GAA)H1 73 nt0.57□□□□□ -2.32
Retrieved 100 of 7,029 protein–RNA pairs in 13.1 ms