Protein–RNA interactions for Protein: P39109

YCF1, Metal resistance protein YCF1, yeastyeast

Known RBP Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YCF1P39109 YDR354C-AYDR354C-A 144 nt-2.83□□□□□ -2.86
YCF1P39109 YDR220CYDR220C 294 nt-2.83□□□□□ -2.86
YCF1P39109 YLR334CYLR334C 381 nt-2.84□□□□□ -2.86
YCF1P39109 BUD26YDR241W 288 nt-2.85□□□□□ -2.87
YCF1P39109 YKL063CYKL063C 504 nt-2.86□□□□□ -2.87
YCF1P39109 YKL083WYKL083W 615 nt-2.87□□□□□ -2.87
YCF1P39109 YNL303WYNL303W 348 nt-2.87□□□□□ -2.87
YCF1P39109 YMR193C-AYMR193C-A 387 nt-2.88□□□□□ -2.87
YCF1P39109 BI2Q0110 1272 nt-2.88□□□□□ -2.87
YCF1P39109 tQ(UUG)QtQ(UUG)Q 76 nt-2.88□□□□□ -2.87
YCF1P39109 RPS27BYHR021C 249 nt-2.89□□□□□ -2.87
YCF1P39109 YMR013C-AYMR013C-A 150 nt-2.89□□□□□ -2.87
YCF1P39109 YHR050W-AYHR050W-A 171 nt-2.91□□□□□ -2.88
YCF1P39109 YLR456WYLR456W 615 nt-2.91□□□□□ -2.88
YCF1P39109 YER090C-AYER090C-A 90 nt-2.93□□□□□ -2.88
YCF1P39109 YHR007C-AYHR007C-A 216 nt-2.93□□□□□ -2.88
YCF1P39109 YPR039WYPR039W 336 nt-2.93□□□□□ -2.88
YCF1P39109 YLR202CYLR202C 327 nt-2.94□□□□□ -2.88
YCF1P39109 YAF9YNL107W 681 nt-2.95□□□□□ -2.88
YCF1P39109 MRPL32YCR003W 552 nt-2.96□□□□□ -2.88
YCF1P39109 POP6YGR030C 477 nt-2.96□□□□□ -2.88
YCF1P39109 RPS30AYLR287C-A 192 nt-2.96□□□□□ -2.88
YCF1P39109 YNL266WYNL266W 420 nt-2.96□□□□□ -2.88
YCF1P39109 YFL012WYFL012W 447 nt-2.98□□□□□ -2.89
YCF1P39109 YML054C-AYML054C-A 159 nt-2.98□□□□□ -2.89
YCF1P39109 YEL020C-BYEL020C-B 198 nt-2.99□□□□□ -2.89
YCF1P39109 YPR002C-AYPR002C-A 198 nt-2.99□□□□□ -2.89
YCF1P39109 YIR021W-AYIR021W-A 213 nt-3.02□□□□□ -2.89
YCF1P39109 YOR309CYOR309C 381 nt-3.03□□□□□ -2.89
YCF1P39109 PRM3YPL192C 402 nt-3.03□□□□□ -2.89
YCF1P39109 YDR048CYDR048C 315 nt-3.04□□□□□ -2.9
YCF1P39109 snR50snR50 90 nt-3.05□□□□□ -2.9
YCF1P39109 IRC13YOR235W 315 nt-3.09□□□□□ -2.9
YCF1P39109 YMR172C-AYMR172C-A 384 nt-3.12□□□□□ -2.91
YCF1P39109 YDR544CYDR544C 429 nt-3.14□□□□□ -2.91
YCF1P39109 YGR270C-AYGR270C-A 219 nt-3.14□□□□□ -2.91
YCF1P39109 YDR426CYDR426C 378 nt-3.14□□□□□ -2.91
YCF1P39109 TOM22YNL131W 459 nt-3.15□□□□□ -2.91
YCF1P39109 YLR163W-AYLR163W-A 114 nt-3.16□□□□□ -2.92
YCF1P39109 GPI15YNL038W 690 nt-3.17□□□□□ -2.92
YCF1P39109 YDL011CYDL011C 324 nt-3.18□□□□□ -2.92
YCF1P39109 ATP19YOL077W-A 207 nt-3.23□□□□□ -2.93
YCF1P39109 snR67snR67 82 nt-3.25□□□□□ -2.93
YCF1P39109 YOL083C-AYOL083C-A 141 nt-3.26□□□□□ -2.93
YCF1P39109 snR57snR57 88 nt-3.28□□□□□ -2.93
YCF1P39109 snR69snR69 101 nt-3.29□□□□□ -2.94
YCF1P39109 YLR269CYLR269C 351 nt-3.29□□□□□ -2.94
YCF1P39109 YDR524W-CYDR524W-C 90 nt-3.34□□□□□ -2.94
YCF1P39109 YOR008C-AYOR008C-A 225 nt-3.34□□□□□ -2.94
YCF1P39109 YGR069WYGR069W 336 nt-3.34□□□□□ -2.94
YCF1P39109 YOR314W-AYOR314W-A 111 nt-3.34□□□□□ -2.94
YCF1P39109 YML099W-AYML099W-A 330 nt-3.35□□□□□ -2.95
YCF1P39109 AI5_BETAQ0075 1065 nt-3.36□□□□□ -2.95
YCF1P39109 TSC3YBR058C-A 243 nt-3.4□□□□□ -2.95
YCF1P39109 PCC1YKR095W-A 267 nt-3.42□□□□□ -2.96
YCF1P39109 YJR162CYJR162C 351 nt-3.44□□□□□ -2.96
YCF1P39109 YNL337WYNL337W 255 nt-3.44□□□□□ -2.96
YCF1P39109 YLR217WYLR217W 324 nt-3.44□□□□□ -2.96
YCF1P39109 YDR102CYDR102C 333 nt-3.47□□□□□ -2.96
YCF1P39109 YBL071CYBL071C 309 nt-3.47□□□□□ -2.96
YCF1P39109 YGL149WYGL149W 306 nt-3.54□□□□□ -2.98
YCF1P39109 YBR182C-AYBR182C-A 195 nt-3.54□□□□□ -2.98
YCF1P39109 YLL019W-AYLL019W-A 93 nt-3.54□□□□□ -2.98
YCF1P39109 YLR342W-AYLR342W-A 174 nt-3.54□□□□□ -2.98
YCF1P39109 snR9snR9 187 nt-3.55□□□□□ -2.98
YCF1P39109 YER175W-AYER175W-A 165 nt-3.56□□□□□ -2.98
YCF1P39109 HMRA1YCR097W 381 nt-3.59□□□□□ -2.98
YCF1P39109 YGR174W-AYGR174W-A 87 nt-3.6□□□□□ -2.98
YCF1P39109 YER137W-AYER137W-A 306 nt-3.62□□□□□ -2.99
YCF1P39109 ATG16YMR159C 453 nt-3.63□□□□□ -2.99
YCF1P39109 YOR376W-AYOR376W-A 156 nt-3.63□□□□□ -2.99
YCF1P39109 YIL029CYIL029C 429 nt-3.65□□□□□ -2.99
YCF1P39109 YJL197C-AYJL197C-A 282 nt-3.65□□□□□ -2.99
YCF1P39109 YDL158CYDL158C 309 nt-3.69□□□□□ -3
YCF1P39109 YDL016CYDL016C 303 nt-3.7□□□□□ -3
YCF1P39109 YLR286W-AYLR286W-A 135 nt-3.75□□□□□ -3.01
YCF1P39109 tD(GUC)QtD(GUC)Q 75 nt-3.79□□□□□ -3.02
YCF1P39109 YER097WYER097W 330 nt-3.81□□□□□ -3.02
YCF1P39109 YAR047CYAR047C 321 nt-3.86□□□□□ -3.03
YCF1P39109 YIL115W-AYIL115W-A 372 nt-3.88□□□□□ -3.03
YCF1P39109 YOR316C-AYOR316C-A 210 nt-3.9□□□□□ -3.03
YCF1P39109 YDL159C-BYDL159C-B 177 nt-3.9□□□□□ -3.03
YCF1P39109 YPR197CYPR197C 564 nt-3.9□□□□□ -3.03
YCF1P39109 YER181CYER181C 324 nt-3.92□□□□□ -3.04
YCF1P39109 YBR196C-AYBR196C-A 150 nt-3.94□□□□□ -3.04
YCF1P39109 YGR146C-AYGR146C-A 162 nt-3.95□□□□□ -3.04
YCF1P39109 YOR072W-BYOR072W-B 162 nt-3.95□□□□□ -3.04
YCF1P39109 YFL019CYFL019C 354 nt-4.01□□□□□ -3.05
YCF1P39109 YBR178WYBR178W 375 nt-4.02□□□□□ -3.05
YCF1P39109 snR6snR6 112 nt-4.05□□□□□ -3.06
YCF1P39109 snR55snR55 98 nt-4.05□□□□□ -3.06
YCF1P39109 YOL155W-AYOL155W-A 135 nt-4.05□□□□□ -3.06
YCF1P39109 YFL032WYFL032W 321 nt-4.06□□□□□ -3.06
YCF1P39109 YDR524C-AYDR524C-A 120 nt-4.07□□□□□ -3.06
YCF1P39109 tM(CAU)Q2tM(CAU)Q2 78 nt-4.07□□□□□ -3.06
YCF1P39109 STE18YJR086W 333 nt-4.09□□□□□ -3.06
YCF1P39109 YLR406C-AYLR406C-A 150 nt-4.09□□□□□ -3.06
YCF1P39109 CSN9YDR179C 489 nt-4.1□□□□□ -3.07
YCF1P39109 YJR157WYJR157W 363 nt-4.12□□□□□ -3.07
YCF1P39109 MPC1YGL080W 393 nt-4.14□□□□□ -3.07
Retrieved 100 of 7,029 protein–RNA pairs in 215.5 ms