Protein–RNA interactions for Protein: P39000

SHC1, Protein SHC1, yeastyeast

Predictions only

Length 512 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHC1P39000 YKL136WYKL136W 399 nt0.2□□□□□ -2.38
SHC1P39000 YBL100W-BYBL100W-B 5313 nt0.19□□□□□ -2.38
SHC1P39000 YFL032WYFL032W 321 nt0.19□□□□□ -2.38
SHC1P39000 YGR069WYGR069W 336 nt0.19□□□□□ -2.38
SHC1P39000 CSE2YNR010W 450 nt0.19□□□□□ -2.38
SHC1P39000 YPR012WYPR012W 255 nt0.19□□□□□ -2.38
SHC1P39000 YPR197CYPR197C 564 nt0.19□□□□□ -2.38
SHC1P39000 HTL1YCR020W-B 237 nt0.18□□□□□ -2.38
SHC1P39000 YCR022CYCR022C 345 nt0.18□□□□□ -2.38
SHC1P39000 RCO1YMR075W 2055 nt0.18□□□□□ -2.38
SHC1P39000 NNF2YGR089W 2811 nt0.18□□□□□ -2.38
SHC1P39000 snR74snR74 88 nt0.17□□□□□ -2.38
SHC1P39000 YMR193C-AYMR193C-A 387 nt0.17□□□□□ -2.38
SHC1P39000 YOL013W-AYOL013W-A 192 nt0.17□□□□□ -2.38
SHC1P39000 YFL063WYFL063W 456 nt0.16□□□□□ -2.38
SHC1P39000 YGL123C-AYGL123C-A 231 nt0.16□□□□□ -2.38
SHC1P39000 YJL197C-AYJL197C-A 282 nt0.16□□□□□ -2.38
SHC1P39000 YER053C-AYER053C-A 114 nt0.15□□□□□ -2.39
SHC1P39000 YNL146WYNL146W 303 nt0.15□□□□□ -2.39
SHC1P39000 YDR183C-AYDR183C-A 258 nt0.14□□□□□ -2.39
SHC1P39000 YDR413CYDR413C 576 nt0.14□□□□□ -2.39
SHC1P39000 ATP6Q0085 780 nt0.14□□□□□ -2.39
SHC1P39000 GIM4YEL003W 336 nt0.14□□□□□ -2.39
SHC1P39000 YEL020C-BYEL020C-B 198 nt0.14□□□□□ -2.39
SHC1P39000 YJL113WYJL113W 4647 nt0.14□□□□□ -2.39
SHC1P39000 NIP1YMR309C 2439 nt0.13□□□□□ -2.39
SHC1P39000 YER097WYER097W 330 nt0.13□□□□□ -2.39
SHC1P39000 YGL149WYGL149W 306 nt0.13□□□□□ -2.39
SHC1P39000 YLR120W-AYLR120W-A 102 nt0.13□□□□□ -2.39
SHC1P39000 YPL038W-AYPL038W-A 192 nt0.13□□□□□ -2.39
SHC1P39000 YDL240C-AYDL240C-A 138 nt0.12□□□□□ -2.39
SHC1P39000 COX12YLR038C 252 nt0.12□□□□□ -2.39
SHC1P39000 YLR041WYLR041W 321 nt0.12□□□□□ -2.39
SHC1P39000 YNL028WYNL028W 318 nt0.12□□□□□ -2.39
SHC1P39000 RAD61YDR014W 1944 nt0.12□□□□□ -2.39
SHC1P39000 YLL006W-AYLL006W-A 177 nt0.11□□□□□ -2.39
SHC1P39000 YCR038W-AYCR038W-A 126 nt0.1□□□□□ -2.39
SHC1P39000 BLI1YKL061W 342 nt0.1□□□□□ -2.39
SHC1P39000 SNU13YEL026W 381 nt0.09□□□□□ -2.4
SHC1P39000 YEL073CYEL073C 324 nt0.09□□□□□ -2.4
SHC1P39000 YGL052WYGL052W 306 nt0.09□□□□□ -2.4
SHC1P39000 YHR131W-AYHR131W-A 246 nt0.09□□□□□ -2.4
SHC1P39000 YHR175W-AYHR175W-A 150 nt0.09□□□□□ -2.4
SHC1P39000 YKL118WYKL118W 312 nt0.09□□□□□ -2.4
SHC1P39000 YMR172C-AYMR172C-A 384 nt0.09□□□□□ -2.4
SHC1P39000 YOR072W-BYOR072W-B 162 nt0.09□□□□□ -2.4
SHC1P39000 YPR010C-AYPR010C-A 219 nt0.09□□□□□ -2.4
SHC1P39000 HMRA1YCR097W 381 nt0.07□□□□□ -2.4
SHC1P39000 YDR366CYDR366C 399 nt0.07□□□□□ -2.4
SHC1P39000 tR(ACG)Q2tR(ACG)Q2 74 nt0.07□□□□□ -2.4
SHC1P39000 snR56snR56 88 nt0.06□□□□□ -2.4
SHC1P39000 YDR544CYDR544C 429 nt0.05□□□□□ -2.4
SHC1P39000 YKU70YMR284W 1809 nt0.04□□□□□ -2.4
SHC1P39000 YNL277W-AYNL277W-A 189 nt0.04□□□□□ -2.4
SHC1P39000 YBR072C-AYBR072C-A 162 nt0.04□□□□□ -2.4
SHC1P39000 YIL002W-AYIL002W-A 210 nt0.03□□□□□ -2.4
SHC1P39000 SOV1YMR066W 2697 nt0.03□□□□□ -2.4
SHC1P39000 SDH6YDR379C-A 240 nt0.02□□□□□ -2.41
SHC1P39000 APQ12YIL040W 417 nt0.02□□□□□ -2.41
SHC1P39000 YKL100W-AYKL100W-A 90 nt0.01□□□□□ -2.41
SHC1P39000 YOR186C-AYOR186C-A 210 nt0.01□□□□□ -2.41
SHC1P39000 YIR030W-AYIR030W-A 384 nt0□□□□□ -2.41
SHC1P39000 YMR158W-BYMR158W-B 321 nt0□□□□□ -2.41
SHC1P39000 RPL39YJL189W 156 nt-0.01□□□□□ -2.41
SHC1P39000 YBR131C-AYBR131C-A 90 nt-0.01□□□□□ -2.41
SHC1P39000 TFB5YDR079C-A 219 nt-0.02□□□□□ -2.41
SHC1P39000 tF(GAA)QtF(GAA)Q 75 nt-0.02□□□□□ -2.41
SHC1P39000 YLR232WYLR232W 348 nt-0.02□□□□□ -2.41
SHC1P39000 GLG1YKR058W 1851 nt-0.02□□□□□ -2.41
SHC1P39000 YGL041CYGL041C 204 nt-0.03□□□□□ -2.41
SHC1P39000 YOR008C-AYOR008C-A 225 nt-0.03□□□□□ -2.41
SHC1P39000 YEL014CYEL014C 306 nt-0.05□□□□□ -2.42
SHC1P39000 YBR182C-AYBR182C-A 195 nt-0.05□□□□□ -2.42
SHC1P39000 YBL039C-AYBL039C-A 84 nt-0.06□□□□□ -2.42
SHC1P39000 YBR099CYBR099C 384 nt-0.06□□□□□ -2.42
SHC1P39000 EST1YLR233C 2100 nt-0.07□□□□□ -2.42
SHC1P39000 COG6YNL041C 2520 nt-0.08□□□□□ -2.42
SHC1P39000 YDR524W-CYDR524W-C 90 nt-0.08□□□□□ -2.42
SHC1P39000 YML099W-AYML099W-A 330 nt-0.1□□□□□ -2.43
SHC1P39000 snR128snR128 126 nt-0.1□□□□□ -2.43
SHC1P39000 snR55snR55 98 nt-0.11□□□□□ -2.43
SHC1P39000 snR65snR65 100 nt-0.11□□□□□ -2.43
SHC1P39000 YJL182CYJL182C 318 nt-0.11□□□□□ -2.43
SHC1P39000 YOR302WYOR302W 78 nt-0.11□□□□□ -2.43
SHC1P39000 YPL152W-AYPL152W-A 99 nt-0.11□□□□□ -2.43
SHC1P39000 snR49snR49 165 nt-0.11□□□□□ -2.43
SHC1P39000 YGL182CYGL182C 324 nt-0.12□□□□□ -2.43
SHC1P39000 snR8snR8 190 nt-0.13□□□□□ -2.43
SHC1P39000 YNL097C-BYNL097C-B 123 nt-0.13□□□□□ -2.43
SHC1P39000 YER181CYER181C 324 nt-0.14□□□□□ -2.43
SHC1P39000 YOR314W-AYOR314W-A 111 nt-0.14□□□□□ -2.43
SHC1P39000 YGR164WYGR164W 336 nt-0.15□□□□□ -2.43
SHC1P39000 YOR231C-AYOR231C-A 201 nt-0.15□□□□□ -2.43
SHC1P39000 YDR210WYDR210W 228 nt-0.16□□□□□ -2.44
SHC1P39000 snR80snR80 171 nt-0.17□□□□□ -2.44
SHC1P39000 YOL155W-AYOL155W-A 135 nt-0.17□□□□□ -2.44
SHC1P39000 YOR381W-AYOR381W-A 168 nt-0.17□□□□□ -2.44
SHC1P39000 YPL060C-AYPL060C-A 3315 nt-0.21□□□□□ -2.44
SHC1P39000 snR39BsnR39B 96 nt-0.22□□□□□ -2.44
SHC1P39000 YGL188C-AYGL188C-A 141 nt-0.23□□□□□ -2.45
Retrieved 100 of 7,029 protein–RNA pairs in 13.8 ms