Protein–RNA interactions for Protein: P38872

PFS1, Prospore formation at selected spindle poles protein 1, yeastyeast

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PFS1P38872 tT(AGU)N2tT(AGU)N2 73 nt0.72□□□□□ -2.29
PFS1P38872 tT(AGU)O1tT(AGU)O1 73 nt0.72□□□□□ -2.29
PFS1P38872 tT(AGU)O2tT(AGU)O2 73 nt0.72□□□□□ -2.29
PFS1P38872 snR190snR190 190 nt0.72□□□□□ -2.29
PFS1P38872 NPR2YEL062W 1848 nt0.72□□□□□ -2.29
PFS1P38872 COY1YKL179C 2040 nt0.71□□□□□ -2.3
PFS1P38872 YLR282CYLR282C 342 nt0.71□□□□□ -2.3
PFS1P38872 YLR399W-AYLR399W-A 105 nt0.71□□□□□ -2.3
PFS1P38872 HAL9YOL089C 3093 nt0.7□□□□□ -2.3
PFS1P38872 YGL123C-AYGL123C-A 231 nt0.7□□□□□ -2.3
PFS1P38872 COX5BYIL111W 456 nt0.7□□□□□ -2.3
PFS1P38872 YKL100W-AYKL100W-A 90 nt0.7□□□□□ -2.3
PFS1P38872 YPR160W-AYPR160W-A 81 nt0.7□□□□□ -2.3
PFS1P38872 BLI1YKL061W 342 nt0.69□□□□□ -2.3
PFS1P38872 COX12YLR038C 252 nt0.69□□□□□ -2.3
PFS1P38872 snR80snR80 171 nt0.68□□□□□ -2.3
PFS1P38872 CHS6YJL099W 2241 nt0.67□□□□□ -2.3
PFS1P38872 YOR161W-AYOR161W-A 81 nt0.67□□□□□ -2.3
PFS1P38872 YML002WYML002W 2214 nt0.66□□□□□ -2.3
PFS1P38872 YDR366CYDR366C 399 nt0.66□□□□□ -2.3
PFS1P38872 YIL134C-AYIL134C-A 204 nt0.66□□□□□ -2.3
PFS1P38872 YOR302WYOR302W 78 nt0.66□□□□□ -2.3
PFS1P38872 YPR159C-AYPR159C-A 102 nt0.66□□□□□ -2.3
PFS1P38872 PRP5YBR237W 2550 nt0.66□□□□□ -2.3
PFS1P38872 SEC1YDR164C 2175 nt0.66□□□□□ -2.3
PFS1P38872 FYV10YIL097W 1551 nt0.66□□□□□ -2.3
PFS1P38872 ULI1YFR026C 510 nt0.65□□□□□ -2.31
PFS1P38872 YLR041WYLR041W 321 nt0.65□□□□□ -2.31
PFS1P38872 YOR345CYOR345C 351 nt0.65□□□□□ -2.31
PFS1P38872 YIL002W-AYIL002W-A 210 nt0.64□□□□□ -2.31
PFS1P38872 ULP2YIL031W 3105 nt0.64□□□□□ -2.31
PFS1P38872 TRS65YGR166W 1683 nt0.63□□□□□ -2.31
PFS1P38872 BIR1YJR089W 2865 nt0.63□□□□□ -2.31
PFS1P38872 YER053C-AYER053C-A 114 nt0.62□□□□□ -2.31
PFS1P38872 LTE1YAL024C 4308 nt0.62□□□□□ -2.31
PFS1P38872 YCR038W-AYCR038W-A 126 nt0.61□□□□□ -2.31
PFS1P38872 OST4YDL232W 111 nt0.61□□□□□ -2.31
PFS1P38872 YMR272W-AYMR272W-A 114 nt0.61□□□□□ -2.31
PFS1P38872 YNL097C-BYNL097C-B 123 nt0.61□□□□□ -2.31
PFS1P38872 YBR131C-AYBR131C-A 90 nt0.61□□□□□ -2.31
PFS1P38872 FMP27YLR454W 7887 nt0.61□□□□□ -2.31
PFS1P38872 tN(GUU)QtN(GUU)Q 71 nt0.6□□□□□ -2.31
PFS1P38872 APQ12YIL040W 417 nt0.6□□□□□ -2.31
PFS1P38872 PRP42YDR235W 1635 nt0.6□□□□□ -2.31
PFS1P38872 BEM3YPL115C 3387 nt0.59□□□□□ -2.31
PFS1P38872 YJL127W-AYJL127W-A 117 nt0.57□□□□□ -2.32
PFS1P38872 YHR131W-AYHR131W-A 246 nt0.56□□□□□ -2.32
PFS1P38872 YSP1YHR155W 3687 nt0.56□□□□□ -2.32
PFS1P38872 AI1Q0050 2505 nt0.55□□□□□ -2.32
PFS1P38872 YMR158W-BYMR158W-B 321 nt0.54□□□□□ -2.32
PFS1P38872 UTP8YGR128C 2142 nt0.53□□□□□ -2.32
PFS1P38872 PRP39YML046W 1890 nt0.53□□□□□ -2.32
PFS1P38872 SPG3YDR504C 384 nt0.53□□□□□ -2.32
PFS1P38872 SNU13YEL026W 381 nt0.52□□□□□ -2.33
PFS1P38872 UTP10YJL109C 5310 nt0.51□□□□□ -2.33
PFS1P38872 YMR046W-AYMR046W-A 129 nt0.51□□□□□ -2.33
PFS1P38872 YOR192C-BYOR192C-B 5313 nt0.51□□□□□ -2.33
PFS1P38872 YJL182CYJL182C 318 nt0.5□□□□□ -2.33
PFS1P38872 snR46snR46 197 nt0.5□□□□□ -2.33
PFS1P38872 IQG1YPL242C 4488 nt0.49□□□□□ -2.33
PFS1P38872 YEL014CYEL014C 306 nt0.49□□□□□ -2.33
PFS1P38872 YLR232WYLR232W 348 nt0.49□□□□□ -2.33
PFS1P38872 PET111YMR257C 2403 nt0.49□□□□□ -2.33
PFS1P38872 NNF2YGR089W 2811 nt0.49□□□□□ -2.33
PFS1P38872 JLP2YMR132C 627 nt0.48□□□□□ -2.33
PFS1P38872 RPM2YML091C 3609 nt0.47□□□□□ -2.33
PFS1P38872 tM(CAU)Q1tM(CAU)Q1 76 nt0.47□□□□□ -2.33
PFS1P38872 TAH1YCR060W 336 nt0.46□□□□□ -2.34
PFS1P38872 YDR406W-AYDR406W-A 246 nt0.46□□□□□ -2.34
PFS1P38872 YBL039C-AYBL039C-A 84 nt0.46□□□□□ -2.34
PFS1P38872 MLP1YKR095W 5628 nt0.45□□□□□ -2.34
PFS1P38872 BUL2YML111W 2763 nt0.45□□□□□ -2.34
PFS1P38872 YEL073CYEL073C 324 nt0.44□□□□□ -2.34
PFS1P38872 YLL006W-AYLL006W-A 177 nt0.44□□□□□ -2.34
PFS1P38872 NIP1YMR309C 2439 nt0.44□□□□□ -2.34
PFS1P38872 YGL182CYGL182C 324 nt0.43□□□□□ -2.34
PFS1P38872 YBR072C-AYBR072C-A 162 nt0.43□□□□□ -2.34
PFS1P38872 RPS26AYGL189C 360 nt0.42□□□□□ -2.34
PFS1P38872 YDR371C-AYDR371C-A 105 nt0.41□□□□□ -2.34
PFS1P38872 YLR342W-AYLR342W-A 174 nt0.41□□□□□ -2.34
PFS1P38872 snR52snR52 92 nt0.41□□□□□ -2.34
PFS1P38872 GLG1YKR058W 1851 nt0.4□□□□□ -2.35
PFS1P38872 SBH1YER087C-B 249 nt0.4□□□□□ -2.35
PFS1P38872 YDR544CYDR544C 429 nt0.39□□□□□ -2.35
PFS1P38872 YER078W-AYER078W-A 165 nt0.39□□□□□ -2.35
PFS1P38872 YOR170WYOR170W 306 nt0.38□□□□□ -2.35
PFS1P38872 YOR381W-AYOR381W-A 168 nt0.38□□□□□ -2.35
PFS1P38872 ORC3YLL004W 1851 nt0.37□□□□□ -2.35
PFS1P38872 SDH6YDR379C-A 240 nt0.37□□□□□ -2.35
PFS1P38872 COG6YNL041C 2520 nt0.37□□□□□ -2.35
PFS1P38872 THO2YNL139C 4794 nt0.37□□□□□ -2.35
PFS1P38872 YOR314W-AYOR314W-A 111 nt0.35□□□□□ -2.35
PFS1P38872 YJL150WYJL150W 303 nt0.34□□□□□ -2.36
PFS1P38872 MLP2YIL149C 5040 nt0.34□□□□□ -2.36
PFS1P38872 RCO1YMR075W 2055 nt0.32□□□□□ -2.36
PFS1P38872 snR48snR48 113 nt0.31□□□□□ -2.36
PFS1P38872 YBL100W-BYBL100W-B 5313 nt0.31□□□□□ -2.36
PFS1P38872 YPL060C-AYPL060C-A 3315 nt0.27□□□□□ -2.37
PFS1P38872 CSE1YGL238W 2883 nt0.27□□□□□ -2.37
PFS1P38872 YNL054W-BYNL054W-B 5250 nt0.26□□□□□ -2.37
Retrieved 100 of 7,029 protein–RNA pairs in 14.1 ms