Protein–RNA interactions for Protein: P38735

VMR1, ABC transporter ATP-binding protein/permease VMR1, yeastyeast

Predictions only

Length 1,592 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VMR1P38735 YLR456WYLR456W 615 nt-2.7□□□□□ -2.84
VMR1P38735 RDS3YPR094W 324 nt-2.7□□□□□ -2.84
VMR1P38735 CDC65tQ(CUG)M 72 nt-2.7□□□□□ -2.84
VMR1P38735 JLP2YMR132C 627 nt-2.71□□□□□ -2.84
VMR1P38735 YDL011CYDL011C 324 nt-2.72□□□□□ -2.84
VMR1P38735 snR81snR81 201 nt-2.72□□□□□ -2.84
VMR1P38735 YHR125WYHR125W 306 nt-2.72□□□□□ -2.84
VMR1P38735 YEL020C-BYEL020C-B 198 nt-2.73□□□□□ -2.85
VMR1P38735 YOR121CYOR121C 306 nt-2.73□□□□□ -2.85
VMR1P38735 YBR285WYBR285W 435 nt-2.73□□□□□ -2.85
VMR1P38735 CSE2YNR010W 450 nt-2.75□□□□□ -2.85
VMR1P38735 YPL229WYPL229W 621 nt-2.75□□□□□ -2.85
VMR1P38735 YDR426CYDR426C 378 nt-2.77□□□□□ -2.85
VMR1P38735 Q0142Q0142 177 nt-2.78□□□□□ -2.86
VMR1P38735 YFL012WYFL012W 447 nt-2.8□□□□□ -2.86
VMR1P38735 YER090C-AYER090C-A 90 nt-2.81□□□□□ -2.86
VMR1P38735 YAF9YNL107W 681 nt-2.84□□□□□ -2.86
VMR1P38735 snR77snR77 88 nt-2.85□□□□□ -2.87
VMR1P38735 tQ(UUG)QtQ(UUG)Q 76 nt-2.86□□□□□ -2.87
VMR1P38735 EAF6YJR082C 342 nt-2.87□□□□□ -2.87
VMR1P38735 YGR240C-AYGR240C-A 201 nt-2.91□□□□□ -2.87
VMR1P38735 TSC3YBR058C-A 243 nt-2.91□□□□□ -2.87
VMR1P38735 BI2Q0110 1272 nt-2.92□□□□□ -2.88
VMR1P38735 PRM3YPL192C 402 nt-2.93□□□□□ -2.88
VMR1P38735 YGR270C-AYGR270C-A 219 nt-2.94□□□□□ -2.88
VMR1P38735 YOR293C-AYOR293C-A 150 nt-2.94□□□□□ -2.88
VMR1P38735 YMR193C-AYMR193C-A 387 nt-2.95□□□□□ -2.88
VMR1P38735 YNL205CYNL205C 423 nt-2.95□□□□□ -2.88
VMR1P38735 YNL266WYNL266W 420 nt-2.98□□□□□ -2.89
VMR1P38735 YER175W-AYER175W-A 165 nt-2.99□□□□□ -2.89
VMR1P38735 GPI15YNL038W 690 nt-2.99□□□□□ -2.89
VMR1P38735 TOM22YNL131W 459 nt-2.99□□□□□ -2.89
VMR1P38735 ATG16YMR159C 453 nt-3□□□□□ -2.89
VMR1P38735 YBL071CYBL071C 309 nt-3.02□□□□□ -2.89
VMR1P38735 snR39BsnR39B 96 nt-3.03□□□□□ -2.89
VMR1P38735 YGR069WYGR069W 336 nt-3.05□□□□□ -2.9
VMR1P38735 RPS27BYHR021C 249 nt-3.07□□□□□ -2.9
VMR1P38735 YML054C-AYML054C-A 159 nt-3.07□□□□□ -2.9
VMR1P38735 YDR544CYDR544C 429 nt-3.08□□□□□ -2.9
VMR1P38735 YLR202CYLR202C 327 nt-3.08□□□□□ -2.9
VMR1P38735 YKL044WYKL044W 321 nt-3.09□□□□□ -2.9
VMR1P38735 PCC1YKR095W-A 267 nt-3.1□□□□□ -2.91
VMR1P38735 snR9snR9 187 nt-3.11□□□□□ -2.91
VMR1P38735 YLR217WYLR217W 324 nt-3.11□□□□□ -2.91
VMR1P38735 YOR314W-AYOR314W-A 111 nt-3.12□□□□□ -2.91
VMR1P38735 snR50snR50 90 nt-3.12□□□□□ -2.91
VMR1P38735 YMR315W-AYMR315W-A 108 nt-3.14□□□□□ -2.91
VMR1P38735 YKL063CYKL063C 504 nt-3.16□□□□□ -2.91
VMR1P38735 YDR048CYDR048C 315 nt-3.21□□□□□ -2.92
VMR1P38735 YGR174W-AYGR174W-A 87 nt-3.22□□□□□ -2.93
VMR1P38735 YLL019W-AYLL019W-A 93 nt-3.26□□□□□ -2.93
VMR1P38735 snR69snR69 101 nt-3.27□□□□□ -2.93
VMR1P38735 YDL016CYDL016C 303 nt-3.27□□□□□ -2.93
VMR1P38735 YGL149WYGL149W 306 nt-3.29□□□□□ -2.94
VMR1P38735 YIR021W-AYIR021W-A 213 nt-3.29□□□□□ -2.94
VMR1P38735 YML099W-AYML099W-A 330 nt-3.29□□□□□ -2.94
VMR1P38735 snR67snR67 82 nt-3.3□□□□□ -2.94
VMR1P38735 YIL029CYIL029C 429 nt-3.34□□□□□ -2.94
VMR1P38735 HMRA1YCR097W 381 nt-3.35□□□□□ -2.95
VMR1P38735 YJL197C-AYJL197C-A 282 nt-3.35□□□□□ -2.95
VMR1P38735 YLR269CYLR269C 351 nt-3.38□□□□□ -2.95
VMR1P38735 YMR172C-AYMR172C-A 384 nt-3.38□□□□□ -2.95
VMR1P38735 YOR309CYOR309C 381 nt-3.38□□□□□ -2.95
VMR1P38735 snR34snR34 203 nt-3.38□□□□□ -2.95
VMR1P38735 YDR102CYDR102C 333 nt-3.4□□□□□ -2.95
VMR1P38735 YAR047CYAR047C 321 nt-3.46□□□□□ -2.96
VMR1P38735 YOR008C-AYOR008C-A 225 nt-3.47□□□□□ -2.97
VMR1P38735 YER137W-AYER137W-A 306 nt-3.48□□□□□ -2.97
VMR1P38735 YIL115W-AYIL115W-A 372 nt-3.53□□□□□ -2.97
VMR1P38735 ATP19YOL077W-A 207 nt-3.59□□□□□ -2.98
VMR1P38735 YBR182C-AYBR182C-A 195 nt-3.59□□□□□ -2.98
VMR1P38735 YOR072W-BYOR072W-B 162 nt-3.62□□□□□ -2.99
VMR1P38735 YLR342W-AYLR342W-A 174 nt-3.63□□□□□ -2.99
VMR1P38735 YDL158CYDL158C 309 nt-3.66□□□□□ -3
VMR1P38735 YOL083C-AYOL083C-A 141 nt-3.66□□□□□ -3
VMR1P38735 tD(GUC)QtD(GUC)Q 75 nt-3.68□□□□□ -3
VMR1P38735 YER097WYER097W 330 nt-3.71□□□□□ -3
VMR1P38735 YLR286W-AYLR286W-A 135 nt-3.72□□□□□ -3.01
VMR1P38735 CSN9YDR179C 489 nt-3.74□□□□□ -3.01
VMR1P38735 YGR146C-AYGR146C-A 162 nt-3.74□□□□□ -3.01
VMR1P38735 YDR524W-CYDR524W-C 90 nt-3.75□□□□□ -3.01
VMR1P38735 YOR376W-AYOR376W-A 156 nt-3.75□□□□□ -3.01
VMR1P38735 MPC1YGL080W 393 nt-3.77□□□□□ -3.01
VMR1P38735 YDL159C-BYDL159C-B 177 nt-3.86□□□□□ -3.03
VMR1P38735 YFL032WYFL032W 321 nt-3.86□□□□□ -3.03
VMR1P38735 YBR196C-AYBR196C-A 150 nt-3.92□□□□□ -3.04
VMR1P38735 YFL019CYFL019C 354 nt-3.93□□□□□ -3.04
VMR1P38735 YJR162CYJR162C 351 nt-3.93□□□□□ -3.04
VMR1P38735 YNL337WYNL337W 255 nt-3.93□□□□□ -3.04
VMR1P38735 YOR316C-AYOR316C-A 210 nt-3.94□□□□□ -3.04
VMR1P38735 tM(CAU)Q2tM(CAU)Q2 78 nt-3.97□□□□□ -3.04
VMR1P38735 snR54snR54 86 nt-4.01□□□□□ -3.05
VMR1P38735 YPR197CYPR197C 564 nt-4.02□□□□□ -3.05
VMR1P38735 YJR157WYJR157W 363 nt-4.05□□□□□ -3.06
VMR1P38735 YBR178WYBR178W 375 nt-4.08□□□□□ -3.06
VMR1P38735 YLR406C-AYLR406C-A 150 nt-4.12□□□□□ -3.07
VMR1P38735 YOR381W-AYOR381W-A 168 nt-4.12□□□□□ -3.07
VMR1P38735 snR41snR41 95 nt-4.12□□□□□ -3.07
VMR1P38735 snR55snR55 98 nt-4.13□□□□□ -3.07
VMR1P38735 YOL013W-BYOL013W-B 291 nt-4.15□□□□□ -3.07
Retrieved 100 of 7,029 protein–RNA pairs in 12.6 ms