Protein–RNA interactions for Protein: P38428

CUE1, Coupling of ubiquitin conjugation to ER degradation protein 1, yeastyeast

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUE1P38428 YGR164WYGR164W 336 nt-0.26□□□□□ -2.45
CUE1P38428 YKL100W-AYKL100W-A 90 nt-0.26□□□□□ -2.45
CUE1P38428 YDR366CYDR366C 399 nt-0.27□□□□□ -2.45
CUE1P38428 snR8snR8 190 nt-0.28□□□□□ -2.45
CUE1P38428 YBR072C-AYBR072C-A 162 nt-0.29□□□□□ -2.46
CUE1P38428 YGR069WYGR069W 336 nt-0.3□□□□□ -2.46
CUE1P38428 BIL1YOR304C-A 231 nt-0.3□□□□□ -2.46
CUE1P38428 TAH1YCR060W 336 nt-0.31□□□□□ -2.46
CUE1P38428 YJL197C-AYJL197C-A 282 nt-0.31□□□□□ -2.46
CUE1P38428 YJR157WYJR157W 363 nt-0.31□□□□□ -2.46
CUE1P38428 snR128snR128 126 nt-0.31□□□□□ -2.46
CUE1P38428 YAL068W-AYAL068W-A 255 nt-0.32□□□□□ -2.46
CUE1P38428 YLR264C-AYLR264C-A 117 nt-0.32□□□□□ -2.46
CUE1P38428 YPR016W-AYPR016W-A 261 nt-0.33□□□□□ -2.46
CUE1P38428 YLL019W-AYLL019W-A 93 nt-0.34□□□□□ -2.46
CUE1P38428 URB1YKL014C 5295 nt-0.34□□□□□ -2.46
CUE1P38428 YGR035CYGR035C 351 nt-0.35□□□□□ -2.47
CUE1P38428 YMR158W-BYMR158W-B 321 nt-0.35□□□□□ -2.47
CUE1P38428 YBR099CYBR099C 384 nt-0.35□□□□□ -2.47
CUE1P38428 YDR210WYDR210W 228 nt-0.36□□□□□ -2.47
CUE1P38428 Q0017Q0017 162 nt-0.36□□□□□ -2.47
CUE1P38428 snR46snR46 197 nt-0.37□□□□□ -2.47
CUE1P38428 snR60snR60 104 nt-0.38□□□□□ -2.47
CUE1P38428 YOR293C-AYOR293C-A 150 nt-0.38□□□□□ -2.47
CUE1P38428 YER053C-AYER053C-A 114 nt-0.39□□□□□ -2.47
CUE1P38428 YAL063C-AYAL063C-A 291 nt-0.39□□□□□ -2.47
CUE1P38428 YMR193C-AYMR193C-A 387 nt-0.39□□□□□ -2.47
CUE1P38428 GLG1YKR058W 1851 nt-0.39□□□□□ -2.47
CUE1P38428 HTL1YCR020W-B 237 nt-0.42□□□□□ -2.48
CUE1P38428 YPR170W-AYPR170W-A 186 nt-0.44□□□□□ -2.48
CUE1P38428 EST1YLR233C 2100 nt-0.44□□□□□ -2.48
CUE1P38428 YIL032CYIL032C 357 nt-0.45□□□□□ -2.48
CUE1P38428 RAD61YDR014W 1944 nt-0.45□□□□□ -2.48
CUE1P38428 SEC10YLR166C 2616 nt-0.45□□□□□ -2.48
CUE1P38428 SDH6YDR379C-A 240 nt-0.46□□□□□ -2.48
CUE1P38428 YOR072W-BYOR072W-B 162 nt-0.46□□□□□ -2.48
CUE1P38428 SBH2YER019C-A 267 nt-0.47□□□□□ -2.48
CUE1P38428 HMRA1YCR097W 381 nt-0.48□□□□□ -2.49
CUE1P38428 YLR154W-FYLR154W-F 141 nt-0.48□□□□□ -2.49
CUE1P38428 YIL002W-AYIL002W-A 210 nt-0.49□□□□□ -2.49
CUE1P38428 YOR015WYOR015W 360 nt-0.5□□□□□ -2.49
CUE1P38428 YNL028WYNL028W 318 nt-0.52□□□□□ -2.49
CUE1P38428 APQ12YIL040W 417 nt-0.53□□□□□ -2.49
CUE1P38428 YDR102CYDR102C 333 nt-0.54□□□□□ -2.5
CUE1P38428 YPL060C-AYPL060C-A 3315 nt-0.56□□□□□ -2.5
CUE1P38428 YIR030W-AYIR030W-A 384 nt-0.56□□□□□ -2.5
CUE1P38428 YLR120W-AYLR120W-A 102 nt-0.56□□□□□ -2.5
CUE1P38428 YAF9YNL107W 681 nt-0.56□□□□□ -2.5
CUE1P38428 YCR038W-AYCR038W-A 126 nt-0.57□□□□□ -2.5
CUE1P38428 YLR222C-AYLR222C-A 231 nt-0.58□□□□□ -2.5
CUE1P38428 snR74snR74 88 nt-0.6□□□□□ -2.51
CUE1P38428 YDR183C-AYDR183C-A 258 nt-0.6□□□□□ -2.51
CUE1P38428 COG6YNL041C 2520 nt-0.62□□□□□ -2.51
CUE1P38428 RPM2YML091C 3609 nt-0.63□□□□□ -2.51
CUE1P38428 YDR157WYDR157W 402 nt-0.63□□□□□ -2.51
CUE1P38428 YDR544CYDR544C 429 nt-0.63□□□□□ -2.51
CUE1P38428 ATP6Q0085 780 nt-0.64□□□□□ -2.51
CUE1P38428 YGL149WYGL149W 306 nt-0.65□□□□□ -2.51
CUE1P38428 snR36snR36 182 nt-0.65□□□□□ -2.51
CUE1P38428 YMR172C-AYMR172C-A 384 nt-0.68□□□□□ -2.52
CUE1P38428 YHL009W-BYHL009W-B 5409 nt-0.7□□□□□ -2.52
CUE1P38428 YGL052WYGL052W 306 nt-0.71□□□□□ -2.52
CUE1P38428 YBL039C-AYBL039C-A 84 nt-0.71□□□□□ -2.52
CUE1P38428 YDL007C-AYDL007C-A 258 nt-0.73□□□□□ -2.53
CUE1P38428 YDR118W-AYDR118W-A 117 nt-0.74□□□□□ -2.53
CUE1P38428 YOR314W-AYOR314W-A 111 nt-0.74□□□□□ -2.53
CUE1P38428 YPL038W-AYPL038W-A 192 nt-0.74□□□□□ -2.53
CUE1P38428 YPR197CYPR197C 564 nt-0.75□□□□□ -2.53
CUE1P38428 YIL071W-AYIL071W-A 477 nt-0.76□□□□□ -2.53
CUE1P38428 YML100W-AYML100W-A 174 nt-0.76□□□□□ -2.53
CUE1P38428 VAR1Q0140 1197 nt-0.77□□□□□ -2.53
CUE1P38428 YML099W-AYML099W-A 330 nt-0.77□□□□□ -2.53
CUE1P38428 YFL032WYFL032W 321 nt-0.79□□□□□ -2.54
CUE1P38428 tT(UGU)G1tT(UGU)G1 72 nt-0.79□□□□□ -2.54
CUE1P38428 tT(UGU)G2tT(UGU)G2 72 nt-0.79□□□□□ -2.54
CUE1P38428 tT(UGU)PtT(UGU)P 72 nt-0.79□□□□□ -2.54
CUE1P38428 YNL067W-BYNL067W-B 141 nt-0.79□□□□□ -2.54
CUE1P38428 tA(UGC)QtA(UGC)Q 76 nt-0.81□□□□□ -2.54
CUE1P38428 YGL182CYGL182C 324 nt-0.84□□□□□ -2.54
CUE1P38428 YJL077W-AYJL077W-A 87 nt-0.85□□□□□ -2.55
CUE1P38428 YOR008C-AYOR008C-A 225 nt-0.85□□□□□ -2.55
CUE1P38428 YDL240C-AYDL240C-A 138 nt-0.87□□□□□ -2.55
CUE1P38428 RPL39YJL189W 156 nt-0.87□□□□□ -2.55
CUE1P38428 YGL041CYGL041C 204 nt-0.88□□□□□ -2.55
CUE1P38428 YBR182C-AYBR182C-A 195 nt-0.89□□□□□ -2.55
CUE1P38428 YER097WYER097W 330 nt-0.9□□□□□ -2.55
CUE1P38428 YPR012WYPR012W 255 nt-0.91□□□□□ -2.56
CUE1P38428 YDR413CYDR413C 576 nt-0.92□□□□□ -2.56
CUE1P38428 YNR077CYNR077C 255 nt-0.92□□□□□ -2.56
CUE1P38428 tF(GAA)QtF(GAA)Q 75 nt-0.94□□□□□ -2.56
CUE1P38428 YKL118WYKL118W 312 nt-0.95□□□□□ -2.56
CUE1P38428 YPR010C-AYPR010C-A 219 nt-0.95□□□□□ -2.56
CUE1P38428 PAU9YBL108C-A 129 nt-0.96□□□□□ -2.56
CUE1P38428 snR33snR33 183 nt-0.96□□□□□ -2.56
CUE1P38428 Q0144Q0144 330 nt-0.97□□□□□ -2.56
CUE1P38428 snR69snR69 101 nt-0.98□□□□□ -2.57
CUE1P38428 YNL277W-AYNL277W-A 189 nt-0.98□□□□□ -2.57
CUE1P38428 snR161snR161 161 nt-0.98□□□□□ -2.57
CUE1P38428 tQ(UUG)QtQ(UUG)Q 76 nt-0.99□□□□□ -2.57
CUE1P38428 YBR223W-AYBR223W-A 120 nt-0.99□□□□□ -2.57
Retrieved 100 of 7,029 protein–RNA pairs in 7.2 ms