Protein–RNA interactions for Protein: P38360

PCA1, P-type cation-transporting ATPase, yeastyeast

Predictions only

Length 1,216 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PCA1P38360 YFR012W-AYFR012W-A 87 nt1.24□□□□□ -2.21
PCA1P38360 YJL026C-AYJL026C-A 222 nt1.24□□□□□ -2.21
PCA1P38360 COX12YLR038C 252 nt1.24□□□□□ -2.21
PCA1P38360 NUP188YML103C 4968 nt1.24□□□□□ -2.21
PCA1P38360 TFB5YDR079C-A 219 nt1.23□□□□□ -2.21
PCA1P38360 tF(GAA)BtF(GAA)B 73 nt1.23□□□□□ -2.21
PCA1P38360 tF(GAA)FtF(GAA)F 73 nt1.23□□□□□ -2.21
PCA1P38360 tF(GAA)GtF(GAA)G 73 nt1.23□□□□□ -2.21
PCA1P38360 tF(GAA)H1tF(GAA)H1 73 nt1.23□□□□□ -2.21
PCA1P38360 tF(GAA)H2tF(GAA)H2 73 nt1.23□□□□□ -2.21
PCA1P38360 tF(GAA)MtF(GAA)M 73 nt1.23□□□□□ -2.21
PCA1P38360 tF(GAA)P1tF(GAA)P1 73 nt1.23□□□□□ -2.21
PCA1P38360 tF(GAA)P2tF(GAA)P2 73 nt1.23□□□□□ -2.21
PCA1P38360 YLL020CYLL020C 306 nt1.23□□□□□ -2.21
PCA1P38360 YDR544CYDR544C 429 nt1.22□□□□□ -2.21
PCA1P38360 YNL103W-AYNL103W-A 90 nt1.22□□□□□ -2.21
PCA1P38360 APL1YJR005W 2103 nt1.21□□□□□ -2.22
PCA1P38360 RSM22YKL155C 1887 nt1.21□□□□□ -2.22
PCA1P38360 YCR095W-AYCR095W-A 159 nt1.21□□□□□ -2.22
PCA1P38360 YBR099CYBR099C 384 nt1.21□□□□□ -2.22
PCA1P38360 CMC4YMR194C-B 222 nt1.2□□□□□ -2.22
PCA1P38360 PRP5YBR237W 2550 nt1.19□□□□□ -2.22
PCA1P38360 APL3YBL037W 3078 nt1.19□□□□□ -2.22
PCA1P38360 YNL211CYNL211C 261 nt1.19□□□□□ -2.22
PCA1P38360 SET3YKR029C 2256 nt1.19□□□□□ -2.22
PCA1P38360 CDC39YCR093W 6327 nt1.18□□□□□ -2.22
PCA1P38360 YIL002W-AYIL002W-A 210 nt1.18□□□□□ -2.22
PCA1P38360 NST1YNL091W 3723 nt1.18□□□□□ -2.22
PCA1P38360 PAN2YGL094C 3348 nt1.18□□□□□ -2.22
PCA1P38360 SIP4YJL089W 2490 nt1.17□□□□□ -2.22
PCA1P38360 STO1YMR125W 2586 nt1.17□□□□□ -2.22
PCA1P38360 ROM2YLR371W 4071 nt1.16□□□□□ -2.22
PCA1P38360 YMR326CYMR326C 309 nt1.16□□□□□ -2.22
PCA1P38360 SPT7YBR081C 3999 nt1.15□□□□□ -2.22
PCA1P38360 OST4YDL232W 111 nt1.15□□□□□ -2.23
PCA1P38360 YAL067W-AYAL067W-A 228 nt1.15□□□□□ -2.23
PCA1P38360 YOR161W-AYOR161W-A 81 nt1.15□□□□□ -2.23
PCA1P38360 YBR200W-AYBR200W-A 165 nt1.15□□□□□ -2.23
PCA1P38360 RAD9YDR217C 3930 nt1.15□□□□□ -2.23
PCA1P38360 CHS6YJL099W 2241 nt1.15□□□□□ -2.23
PCA1P38360 YGL182CYGL182C 324 nt1.14□□□□□ -2.23
PCA1P38360 YHR217CYHR217C 462 nt1.13□□□□□ -2.23
PCA1P38360 WAR1YML076C 2835 nt1.13□□□□□ -2.23
PCA1P38360 EAF1YDR359C 2949 nt1.12□□□□□ -2.23
PCA1P38360 SOM1YEL059C-A 225 nt1.12□□□□□ -2.23
PCA1P38360 YGL123C-AYGL123C-A 231 nt1.12□□□□□ -2.23
PCA1P38360 GEA2YEL022W 4380 nt1.12□□□□□ -2.23
PCA1P38360 STB6YKL072W 2301 nt1.11□□□□□ -2.23
PCA1P38360 snR61snR61 90 nt1.11□□□□□ -2.23
PCA1P38360 snR39BsnR39B 96 nt1.11□□□□□ -2.23
PCA1P38360 UTP8YGR128C 2142 nt1.1□□□□□ -2.23
PCA1P38360 YLR282CYLR282C 342 nt1.1□□□□□ -2.23
PCA1P38360 YBL039C-AYBL039C-A 84 nt1.1□□□□□ -2.23
PCA1P38360 YNL067W-BYNL067W-B 141 nt1.1□□□□□ -2.23
PCA1P38360 YDL073WYDL073W 2955 nt1.1□□□□□ -2.23
PCA1P38360 BIR1YJR089W 2865 nt1.1□□□□□ -2.23
PCA1P38360 VAM6YDL077C 3150 nt1.08□□□□□ -2.24
PCA1P38360 BFR2YDR299W 1605 nt1.08□□□□□ -2.24
PCA1P38360 YGL041C-BYGL041C-B 183 nt1.08□□□□□ -2.24
PCA1P38360 YHR131W-AYHR131W-A 246 nt1.08□□□□□ -2.24
PCA1P38360 MYO1YHR023W 5787 nt1.08□□□□□ -2.24
PCA1P38360 NOP9YJL010C 2001 nt1.07□□□□□ -2.24
PCA1P38360 TAH1YCR060W 336 nt1.07□□□□□ -2.24
PCA1P38360 YDL247W-AYDL247W-A 75 nt1.07□□□□□ -2.24
PCA1P38360 YKL100W-AYKL100W-A 90 nt1.07□□□□□ -2.24
PCA1P38360 RCO1YMR075W 2055 nt1.04□□□□□ -2.24
PCA1P38360 COX5BYIL111W 456 nt1.04□□□□□ -2.24
PCA1P38360 YOL014WYOL014W 375 nt1.04□□□□□ -2.24
PCA1P38360 BEM2YER155C 6504 nt1.04□□□□□ -2.24
PCA1P38360 KAP120YPL125W 3099 nt1.04□□□□□ -2.24
PCA1P38360 YML002WYML002W 2214 nt1.03□□□□□ -2.24
PCA1P38360 tM(CAU)Q2tM(CAU)Q2 78 nt1.02□□□□□ -2.25
PCA1P38360 RPL26BYGR034W 384 nt1.02□□□□□ -2.25
PCA1P38360 snR190snR190 190 nt1.01□□□□□ -2.25
PCA1P38360 SCC2YDR180W 4482 nt1.01□□□□□ -2.25
PCA1P38360 FYV10YIL097W 1551 nt1□□□□□ -2.25
PCA1P38360 YJR029WYJR029W 5268 nt1□□□□□ -2.25
PCA1P38360 YPR137C-BYPR137C-B 5268 nt1□□□□□ -2.25
PCA1P38360 YPR117WYPR117W 7470 nt0.99□□□□□ -2.25
PCA1P38360 PRP16YKR086W 3216 nt0.99□□□□□ -2.25
PCA1P38360 SBH1YER087C-B 249 nt0.99□□□□□ -2.25
PCA1P38360 YDR210WYDR210W 228 nt0.98□□□□□ -2.25
PCA1P38360 COG6YNL041C 2520 nt0.96□□□□□ -2.26
PCA1P38360 ASE1YOR058C 2658 nt0.96□□□□□ -2.26
PCA1P38360 YIL142C-AYIL142C-A 333 nt0.96□□□□□ -2.26
PCA1P38360 YJL127W-AYJL127W-A 117 nt0.96□□□□□ -2.26
PCA1P38360 YLR232WYLR232W 348 nt0.96□□□□□ -2.26
PCA1P38360 EMT1tM(CAU)D 73 nt0.95□□□□□ -2.26
PCA1P38360 EMT5tM(CAU)J1 73 nt0.95□□□□□ -2.26
PCA1P38360 EMT3tM(CAU)J2 73 nt0.95□□□□□ -2.26
PCA1P38360 EMT4tM(CAU)M 73 nt0.95□□□□□ -2.26
PCA1P38360 EMT2tM(CAU)O2 73 nt0.95□□□□□ -2.26
PCA1P38360 tS(GCU)Q1tS(GCU)Q1 86 nt0.95□□□□□ -2.26
PCA1P38360 YLR041WYLR041W 321 nt0.95□□□□□ -2.26
PCA1P38360 YMR160WYMR160W 2451 nt0.93□□□□□ -2.26
PCA1P38360 snR81snR81 201 nt0.93□□□□□ -2.26
PCA1P38360 SEC8YPR055W 3198 nt0.93□□□□□ -2.26
PCA1P38360 SEC1YDR164C 2175 nt0.91□□□□□ -2.26
PCA1P38360 YNL266WYNL266W 420 nt0.91□□□□□ -2.26
PCA1P38360 YLL066W-BYLL066W-B 171 nt0.9□□□□□ -2.27
Retrieved 100 of 7,029 protein–RNA pairs in 28.4 ms