Protein–RNA interactions for Protein: P38337

SHG1, COMPASS component SHG1, yeastyeast

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHG1P38337 YGR069WYGR069W 336 nt-0.84□□□□□ -2.54
SHG1P38337 SDH6YDR379C-A 240 nt-0.85□□□□□ -2.55
SHG1P38337 YER053C-AYER053C-A 114 nt-0.86□□□□□ -2.55
SHG1P38337 YJL197C-AYJL197C-A 282 nt-0.86□□□□□ -2.55
SHG1P38337 YLL019W-AYLL019W-A 93 nt-0.86□□□□□ -2.55
SHG1P38337 YMR193C-AYMR193C-A 387 nt-0.86□□□□□ -2.55
SHG1P38337 ATP19YOL077W-A 207 nt-0.86□□□□□ -2.55
SHG1P38337 YLR406C-AYLR406C-A 150 nt-0.91□□□□□ -2.56
SHG1P38337 UTP8YGR128C 2142 nt-0.92□□□□□ -2.56
SHG1P38337 YDR048CYDR048C 315 nt-0.92□□□□□ -2.56
SHG1P38337 YIL071W-AYIL071W-A 477 nt-0.92□□□□□ -2.56
SHG1P38337 YLR264C-AYLR264C-A 117 nt-0.92□□□□□ -2.56
SHG1P38337 YNL067W-BYNL067W-B 141 nt-0.93□□□□□ -2.56
SHG1P38337 YDL007C-AYDL007C-A 258 nt-0.94□□□□□ -2.56
SHG1P38337 YER137W-AYER137W-A 306 nt-0.95□□□□□ -2.56
SHG1P38337 YPR016W-AYPR016W-A 261 nt-0.95□□□□□ -2.56
SHG1P38337 tW(UCA)QtW(UCA)Q 74 nt-0.96□□□□□ -2.56
SHG1P38337 YEL050W-AYEL050W-A 192 nt-0.97□□□□□ -2.56
SHG1P38337 APQ12YIL040W 417 nt-0.98□□□□□ -2.57
SHG1P38337 YOR121CYOR121C 306 nt-0.98□□□□□ -2.57
SHG1P38337 YLR202CYLR202C 327 nt-0.99□□□□□ -2.57
SHG1P38337 YMR001C-AYMR001C-A 231 nt-0.99□□□□□ -2.57
SHG1P38337 RPM2YML091C 3609 nt-1□□□□□ -2.57
SHG1P38337 tA(UGC)QtA(UGC)Q 76 nt-1.02□□□□□ -2.57
SHG1P38337 YIL002W-AYIL002W-A 210 nt-1.02□□□□□ -2.57
SHG1P38337 YKL063CYKL063C 504 nt-1.02□□□□□ -2.57
SHG1P38337 HMRA1YCR097W 381 nt-1.03□□□□□ -2.57
SHG1P38337 YDL158CYDL158C 309 nt-1.03□□□□□ -2.57
SHG1P38337 YML100W-AYML100W-A 174 nt-1.03□□□□□ -2.57
SHG1P38337 YBR285WYBR285W 435 nt-1.03□□□□□ -2.57
SHG1P38337 YPL060C-AYPL060C-A 3315 nt-1.04□□□□□ -2.58
SHG1P38337 snR60snR60 104 nt-1.04□□□□□ -2.58
SHG1P38337 YOR072W-BYOR072W-B 162 nt-1.04□□□□□ -2.58
SHG1P38337 snR33snR33 183 nt-1.04□□□□□ -2.58
SHG1P38337 YJL113WYJL113W 4647 nt-1.04□□□□□ -2.58
SHG1P38337 YHL009W-BYHL009W-B 5409 nt-1.06□□□□□ -2.58
SHG1P38337 YDR544CYDR544C 429 nt-1.06□□□□□ -2.58
SHG1P38337 snR36snR36 182 nt-1.06□□□□□ -2.58
SHG1P38337 YER079WYER079W 633 nt-1.07□□□□□ -2.58
SHG1P38337 COG6YNL041C 2520 nt-1.08□□□□□ -2.58
SHG1P38337 tT(UGU)G1tT(UGU)G1 72 nt-1.08□□□□□ -2.58
SHG1P38337 tT(UGU)G2tT(UGU)G2 72 nt-1.08□□□□□ -2.58
SHG1P38337 tT(UGU)PtT(UGU)P 72 nt-1.08□□□□□ -2.58
SHG1P38337 YCR038W-AYCR038W-A 126 nt-1.09□□□□□ -2.58
SHG1P38337 BIL1YOR304C-A 231 nt-1.09□□□□□ -2.58
SHG1P38337 TAH1YCR060W 336 nt-1.1□□□□□ -2.59
SHG1P38337 PAU9YBL108C-A 129 nt-1.14□□□□□ -2.59
SHG1P38337 YIL032CYIL032C 357 nt-1.16□□□□□ -2.6
SHG1P38337 snR189snR189 189 nt-1.18□□□□□ -2.6
SHG1P38337 YGL149WYGL149W 306 nt-1.19□□□□□ -2.6
SHG1P38337 YNL028WYNL028W 318 nt-1.19□□□□□ -2.6
SHG1P38337 HTL1YCR020W-B 237 nt-1.2□□□□□ -2.6
SHG1P38337 YGL052WYGL052W 306 nt-1.21□□□□□ -2.6
SHG1P38337 YOR015WYOR015W 360 nt-1.22□□□□□ -2.6
SHG1P38337 YNL324WYNL324W 396 nt-1.23□□□□□ -2.61
SHG1P38337 YGR035CYGR035C 351 nt-1.24□□□□□ -2.61
SHG1P38337 YOR314W-AYOR314W-A 111 nt-1.24□□□□□ -2.61
SHG1P38337 YML099W-AYML099W-A 330 nt-1.25□□□□□ -2.61
SHG1P38337 YJL077W-AYJL077W-A 87 nt-1.26□□□□□ -2.61
SHG1P38337 YBL039C-AYBL039C-A 84 nt-1.26□□□□□ -2.61
SHG1P38337 YJL182CYJL182C 318 nt-1.27□□□□□ -2.61
SHG1P38337 snR74snR74 88 nt-1.28□□□□□ -2.61
SHG1P38337 YAL063C-AYAL063C-A 291 nt-1.28□□□□□ -2.61
SHG1P38337 YAL068W-AYAL068W-A 255 nt-1.28□□□□□ -2.61
SHG1P38337 YLR120W-AYLR120W-A 102 nt-1.28□□□□□ -2.61
SHG1P38337 YAF9YNL107W 681 nt-1.28□□□□□ -2.61
SHG1P38337 ATP6Q0085 780 nt-1.33□□□□□ -2.62
SHG1P38337 YAL016C-BYAL016C-B 186 nt-1.33□□□□□ -2.62
SHG1P38337 YPR010C-AYPR010C-A 219 nt-1.33□□□□□ -2.62
SHG1P38337 snR161snR161 161 nt-1.35□□□□□ -2.63
SHG1P38337 snR49snR49 165 nt-1.35□□□□□ -2.63
SHG1P38337 tQ(UUG)QtQ(UUG)Q 76 nt-1.36□□□□□ -2.63
SHG1P38337 YOR170WYOR170W 306 nt-1.37□□□□□ -2.63
SHG1P38337 YOR293C-AYOR293C-A 150 nt-1.37□□□□□ -2.63
SHG1P38337 YGL182CYGL182C 324 nt-1.41□□□□□ -2.64
SHG1P38337 YLR154W-FYLR154W-F 141 nt-1.41□□□□□ -2.64
SHG1P38337 YJR157WYJR157W 363 nt-1.42□□□□□ -2.64
SHG1P38337 snR69snR69 101 nt-1.43□□□□□ -2.64
SHG1P38337 YDR102CYDR102C 333 nt-1.44□□□□□ -2.64
SHG1P38337 YMR172C-AYMR172C-A 384 nt-1.44□□□□□ -2.64
SHG1P38337 YFL032WYFL032W 321 nt-1.45□□□□□ -2.64
SHG1P38337 YBR223W-AYBR223W-A 120 nt-1.47□□□□□ -2.64
SHG1P38337 YDR183C-AYDR183C-A 258 nt-1.48□□□□□ -2.65
SHG1P38337 YER090C-AYER090C-A 90 nt-1.48□□□□□ -2.65
SHG1P38337 YNL266WYNL266W 420 nt-1.52□□□□□ -2.65
SHG1P38337 YGL041CYGL041C 204 nt-1.54□□□□□ -2.66
SHG1P38337 snR50snR50 90 nt-1.55□□□□□ -2.66
SHG1P38337 tP(UGG)QtP(UGG)Q 72 nt-1.56□□□□□ -2.66
SHG1P38337 YER097WYER097W 330 nt-1.57□□□□□ -2.66
SHG1P38337 RDS3YPR094W 324 nt-1.58□□□□□ -2.66
SHG1P38337 JLP2YMR132C 627 nt-1.6□□□□□ -2.67
SHG1P38337 tM(CAU)Q2tM(CAU)Q2 78 nt-1.61□□□□□ -2.67
SHG1P38337 YBR182C-AYBR182C-A 195 nt-1.62□□□□□ -2.67
SHG1P38337 PMP2YEL017C-A 132 nt-1.63□□□□□ -2.67
SHG1P38337 YOR381W-AYOR381W-A 168 nt-1.63□□□□□ -2.67
SHG1P38337 YGR146C-AYGR146C-A 162 nt-1.66□□□□□ -2.68
SHG1P38337 YOR008C-AYOR008C-A 225 nt-1.67□□□□□ -2.68
SHG1P38337 YPL038W-AYPL038W-A 192 nt-1.67□□□□□ -2.68
SHG1P38337 YEL014CYEL014C 306 nt-1.68□□□□□ -2.68
SHG1P38337 YFL019CYFL019C 354 nt-1.69□□□□□ -2.68
Retrieved 100 of 7,029 protein–RNA pairs in 12.7 ms