Protein–RNA interactions for Protein: P38200

SHE1, Mitotic spindle-associated protein SHE1, yeastyeast

Predictions only

Length 338 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHE1P38200 YJL127W-AYJL127W-A 117 nt0.54□□□□□ -2.32
SHE1P38200 LTE1YAL024C 4308 nt0.54□□□□□ -2.32
SHE1P38200 YCR038W-AYCR038W-A 126 nt0.53□□□□□ -2.32
SHE1P38200 OST4YDL232W 111 nt0.53□□□□□ -2.32
SHE1P38200 YIL134C-AYIL134C-A 204 nt0.53□□□□□ -2.32
SHE1P38200 COX12YLR038C 252 nt0.53□□□□□ -2.32
SHE1P38200 YBR182C-AYBR182C-A 195 nt0.53□□□□□ -2.32
SHE1P38200 YOR192C-BYOR192C-B 5313 nt0.52□□□□□ -2.33
SHE1P38200 tF(GAA)QtF(GAA)Q 75 nt0.52□□□□□ -2.33
SHE1P38200 YER053C-AYER053C-A 114 nt0.52□□□□□ -2.33
SHE1P38200 YKL100W-AYKL100W-A 90 nt0.52□□□□□ -2.33
SHE1P38200 HUG1YML058W-A 207 nt0.52□□□□□ -2.33
SHE1P38200 YOL155W-AYOL155W-A 135 nt0.52□□□□□ -2.33
SHE1P38200 YOR345CYOR345C 351 nt0.52□□□□□ -2.33
SHE1P38200 PRP42YDR235W 1635 nt0.52□□□□□ -2.33
SHE1P38200 YKU70YMR284W 1809 nt0.52□□□□□ -2.33
SHE1P38200 YCR022CYCR022C 345 nt0.49□□□□□ -2.33
SHE1P38200 YGL188C-AYGL188C-A 141 nt0.49□□□□□ -2.33
SHE1P38200 HAL9YOL089C 3093 nt0.49□□□□□ -2.33
SHE1P38200 PET111YMR257C 2403 nt0.49□□□□□ -2.33
SHE1P38200 ABF2YMR072W 552 nt0.47□□□□□ -2.33
SHE1P38200 YMR160WYMR160W 2451 nt0.46□□□□□ -2.34
SHE1P38200 YDR366CYDR366C 399 nt0.46□□□□□ -2.34
SHE1P38200 YIL002W-AYIL002W-A 210 nt0.46□□□□□ -2.34
SHE1P38200 APQ12YIL040W 417 nt0.46□□□□□ -2.34
SHE1P38200 YBR131C-AYBR131C-A 90 nt0.46□□□□□ -2.34
SHE1P38200 PAU12YGR294W 363 nt0.45□□□□□ -2.34
SHE1P38200 BEM3YPL115C 3387 nt0.45□□□□□ -2.34
SHE1P38200 UTP20YBL004W 7482 nt0.45□□□□□ -2.34
SHE1P38200 UTP8YGR128C 2142 nt0.44□□□□□ -2.34
SHE1P38200 YHR131W-AYHR131W-A 246 nt0.44□□□□□ -2.34
SHE1P38200 YLR041WYLR041W 321 nt0.44□□□□□ -2.34
SHE1P38200 NNF2YGR089W 2811 nt0.43□□□□□ -2.34
SHE1P38200 SNU13YEL026W 381 nt0.43□□□□□ -2.34
SHE1P38200 SBH1YER087C-B 249 nt0.42□□□□□ -2.34
SHE1P38200 TRS65YGR166W 1683 nt0.42□□□□□ -2.34
SHE1P38200 snR80snR80 171 nt0.41□□□□□ -2.34
SHE1P38200 YOR302WYOR302W 78 nt0.41□□□□□ -2.34
SHE1P38200 YLL006W-AYLL006W-A 177 nt0.4□□□□□ -2.35
SHE1P38200 YSP1YHR155W 3687 nt0.4□□□□□ -2.35
SHE1P38200 snR8snR8 190 nt0.38□□□□□ -2.35
SHE1P38200 YDR371C-AYDR371C-A 105 nt0.38□□□□□ -2.35
SHE1P38200 RPS26AYGL189C 360 nt0.37□□□□□ -2.35
SHE1P38200 YKL145W-AYKL145W-A 93 nt0.37□□□□□ -2.35
SHE1P38200 YLR232WYLR232W 348 nt0.37□□□□□ -2.35
SHE1P38200 ORC3YLL004W 1851 nt0.37□□□□□ -2.35
SHE1P38200 TAH1YCR060W 336 nt0.36□□□□□ -2.35
SHE1P38200 tF(GAA)BtF(GAA)B 73 nt0.36□□□□□ -2.35
SHE1P38200 tF(GAA)FtF(GAA)F 73 nt0.36□□□□□ -2.35
SHE1P38200 tF(GAA)GtF(GAA)G 73 nt0.36□□□□□ -2.35
SHE1P38200 tF(GAA)H1tF(GAA)H1 73 nt0.36□□□□□ -2.35
SHE1P38200 tF(GAA)H2tF(GAA)H2 73 nt0.36□□□□□ -2.35
SHE1P38200 tF(GAA)MtF(GAA)M 73 nt0.36□□□□□ -2.35
SHE1P38200 tF(GAA)P1tF(GAA)P1 73 nt0.36□□□□□ -2.35
SHE1P38200 tF(GAA)P2tF(GAA)P2 73 nt0.36□□□□□ -2.35
SHE1P38200 YDR544CYDR544C 429 nt0.35□□□□□ -2.35
SHE1P38200 YEL014CYEL014C 306 nt0.35□□□□□ -2.35
SHE1P38200 YBR072C-AYBR072C-A 162 nt0.35□□□□□ -2.35
SHE1P38200 ULP2YIL031W 3105 nt0.35□□□□□ -2.35
SHE1P38200 NIP1YMR309C 2439 nt0.34□□□□□ -2.36
SHE1P38200 FMP27YLR454W 7887 nt0.33□□□□□ -2.36
SHE1P38200 MLP1YKR095W 5628 nt0.31□□□□□ -2.36
SHE1P38200 YJL182CYJL182C 318 nt0.31□□□□□ -2.36
SHE1P38200 YNL097C-BYNL097C-B 123 nt0.31□□□□□ -2.36
SHE1P38200 PRP39YML046W 1890 nt0.31□□□□□ -2.36
SHE1P38200 SDH6YDR379C-A 240 nt0.28□□□□□ -2.36
SHE1P38200 YBL039C-AYBL039C-A 84 nt0.28□□□□□ -2.36
SHE1P38200 YOL014WYOL014W 375 nt0.28□□□□□ -2.36
SHE1P38200 BIR1YJR089W 2865 nt0.28□□□□□ -2.36
SHE1P38200 CSE1YGL238W 2883 nt0.27□□□□□ -2.37
SHE1P38200 BUL2YML111W 2763 nt0.26□□□□□ -2.37
SHE1P38200 YGL182CYGL182C 324 nt0.26□□□□□ -2.37
SHE1P38200 YMR158W-BYMR158W-B 321 nt0.26□□□□□ -2.37
SHE1P38200 snR52snR52 92 nt0.26□□□□□ -2.37
SHE1P38200 AI1Q0050 2505 nt0.25□□□□□ -2.37
SHE1P38200 YBL100W-BYBL100W-B 5313 nt0.25□□□□□ -2.37
SHE1P38200 RCO1YMR075W 2055 nt0.25□□□□□ -2.37
SHE1P38200 IQG1YPL242C 4488 nt0.25□□□□□ -2.37
SHE1P38200 GLG1YKR058W 1851 nt0.24□□□□□ -2.37
SHE1P38200 COG6YNL041C 2520 nt0.23□□□□□ -2.37
SHE1P38200 YEL073CYEL073C 324 nt0.23□□□□□ -2.37
SHE1P38200 QCR9YGR183C 201 nt0.22□□□□□ -2.37
SHE1P38200 MLP2YIL149C 5040 nt0.21□□□□□ -2.38
SHE1P38200 YOR186C-AYOR186C-A 210 nt0.2□□□□□ -2.38
SHE1P38200 YOR381W-AYOR381W-A 168 nt0.2□□□□□ -2.38
SHE1P38200 YDR406W-AYDR406W-A 246 nt0.19□□□□□ -2.38
SHE1P38200 YLR342W-AYLR342W-A 174 nt0.19□□□□□ -2.38
SHE1P38200 YOL013W-AYOL013W-A 192 nt0.18□□□□□ -2.38
SHE1P38200 ESP1YGR098C 4893 nt0.18□□□□□ -2.38
SHE1P38200 YOR314W-AYOR314W-A 111 nt0.17□□□□□ -2.38
SHE1P38200 snR46snR46 197 nt0.17□□□□□ -2.38
SHE1P38200 YNL054W-BYNL054W-B 5250 nt0.17□□□□□ -2.38
SHE1P38200 YDR210WYDR210W 228 nt0.14□□□□□ -2.39
SHE1P38200 tM(CAU)Q2tM(CAU)Q2 78 nt0.13□□□□□ -2.39
SHE1P38200 YOR170WYOR170W 306 nt0.13□□□□□ -2.39
SHE1P38200 YBR099CYBR099C 384 nt0.12□□□□□ -2.39
SHE1P38200 SPG3YDR504C 384 nt0.11□□□□□ -2.39
SHE1P38200 YMR046W-AYMR046W-A 129 nt0.1□□□□□ -2.39
SHE1P38200 JLP2YMR132C 627 nt0.1□□□□□ -2.39
SHE1P38200 YER078W-AYER078W-A 165 nt0.09□□□□□ -2.4
Retrieved 100 of 7,029 protein–RNA pairs in 108.9 ms