Protein–RNA interactions for Protein: P32343

SSH4, Protein SSH4, yeastyeast

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSH4P32343 tT(AGU)BtT(AGU)B 73 nt0.69□□□□□ -2.3
SSH4P32343 tT(AGU)CtT(AGU)C 73 nt0.69□□□□□ -2.3
SSH4P32343 tT(AGU)DtT(AGU)D 73 nt0.69□□□□□ -2.3
SSH4P32343 tT(AGU)HtT(AGU)H 73 nt0.69□□□□□ -2.3
SSH4P32343 tT(AGU)I1tT(AGU)I1 73 nt0.69□□□□□ -2.3
SSH4P32343 tT(AGU)I2tT(AGU)I2 73 nt0.69□□□□□ -2.3
SSH4P32343 tT(AGU)JtT(AGU)J 73 nt0.69□□□□□ -2.3
SSH4P32343 tT(AGU)N1tT(AGU)N1 73 nt0.69□□□□□ -2.3
SSH4P32343 tT(AGU)N2tT(AGU)N2 73 nt0.69□□□□□ -2.3
SSH4P32343 tT(AGU)O1tT(AGU)O1 73 nt0.69□□□□□ -2.3
SSH4P32343 tT(AGU)O2tT(AGU)O2 73 nt0.69□□□□□ -2.3
SSH4P32343 YLR041WYLR041W 321 nt0.69□□□□□ -2.3
SSH4P32343 tN(GUU)QtN(GUU)Q 71 nt0.68□□□□□ -2.3
SSH4P32343 YOR345CYOR345C 351 nt0.68□□□□□ -2.3
SSH4P32343 IQG1YPL242C 4488 nt0.66□□□□□ -2.3
SSH4P32343 COX12YLR038C 252 nt0.66□□□□□ -2.3
SSH4P32343 YMR272W-AYMR272W-A 114 nt0.66□□□□□ -2.3
SSH4P32343 YIR030W-AYIR030W-A 384 nt0.65□□□□□ -2.31
SSH4P32343 YOL014WYOL014W 375 nt0.65□□□□□ -2.31
SSH4P32343 YOR231C-AYOR231C-A 201 nt0.65□□□□□ -2.31
SSH4P32343 PET111YMR257C 2403 nt0.65□□□□□ -2.31
SSH4P32343 MLP1YKR095W 5628 nt0.63□□□□□ -2.31
SSH4P32343 BIR1YJR089W 2865 nt0.63□□□□□ -2.31
SSH4P32343 YPL152W-AYPL152W-A 99 nt0.62□□□□□ -2.31
SSH4P32343 UTP10YJL109C 5310 nt0.62□□□□□ -2.31
SSH4P32343 tF(GAA)QtF(GAA)Q 75 nt0.61□□□□□ -2.31
SSH4P32343 YKL145W-AYKL145W-A 93 nt0.61□□□□□ -2.31
SSH4P32343 snR49snR49 165 nt0.61□□□□□ -2.31
SSH4P32343 MYO1YHR023W 5787 nt0.61□□□□□ -2.31
SSH4P32343 ULP2YIL031W 3105 nt0.59□□□□□ -2.31
SSH4P32343 YHR131W-AYHR131W-A 246 nt0.59□□□□□ -2.31
SSH4P32343 YBR182C-AYBR182C-A 195 nt0.59□□□□□ -2.31
SSH4P32343 YKU70YMR284W 1809 nt0.59□□□□□ -2.32
SSH4P32343 YIL002W-AYIL002W-A 210 nt0.58□□□□□ -2.32
SSH4P32343 YER053C-AYER053C-A 114 nt0.57□□□□□ -2.32
SSH4P32343 NNF2YGR089W 2811 nt0.57□□□□□ -2.32
SSH4P32343 snR55snR55 98 nt0.56□□□□□ -2.32
SSH4P32343 YDR366CYDR366C 399 nt0.56□□□□□ -2.32
SSH4P32343 SBH1YER087C-B 249 nt0.55□□□□□ -2.32
SSH4P32343 YER181CYER181C 324 nt0.55□□□□□ -2.32
SSH4P32343 YOR192C-BYOR192C-B 5313 nt0.54□□□□□ -2.32
SSH4P32343 AI1Q0050 2505 nt0.53□□□□□ -2.32
SSH4P32343 SNU13YEL026W 381 nt0.53□□□□□ -2.32
SSH4P32343 FMP27YLR454W 7887 nt0.53□□□□□ -2.32
SSH4P32343 TRS65YGR166W 1683 nt0.53□□□□□ -2.33
SSH4P32343 MLP2YIL149C 5040 nt0.51□□□□□ -2.33
SSH4P32343 YCR038W-AYCR038W-A 126 nt0.51□□□□□ -2.33
SSH4P32343 YOL155W-AYOL155W-A 135 nt0.5□□□□□ -2.33
SSH4P32343 RPS26AYGL189C 360 nt0.49□□□□□ -2.33
SSH4P32343 YML099W-AYML099W-A 330 nt0.49□□□□□ -2.33
SSH4P32343 NIP1YMR309C 2439 nt0.49□□□□□ -2.33
SSH4P32343 YDR371C-AYDR371C-A 105 nt0.48□□□□□ -2.33
SSH4P32343 BUL2YML111W 2763 nt0.47□□□□□ -2.33
SSH4P32343 APQ12YIL040W 417 nt0.46□□□□□ -2.34
SSH4P32343 YLL006W-AYLL006W-A 177 nt0.46□□□□□ -2.34
SSH4P32343 THO2YNL139C 4794 nt0.45□□□□□ -2.34
SSH4P32343 ABF2YMR072W 552 nt0.45□□□□□ -2.34
SSH4P32343 UTP8YGR128C 2142 nt0.44□□□□□ -2.34
SSH4P32343 YGL188C-AYGL188C-A 141 nt0.44□□□□□ -2.34
SSH4P32343 YLR232WYLR232W 348 nt0.42□□□□□ -2.34
SSH4P32343 RPM2YML091C 3609 nt0.42□□□□□ -2.34
SSH4P32343 ORC3YLL004W 1851 nt0.41□□□□□ -2.34
SSH4P32343 YBR072C-AYBR072C-A 162 nt0.39□□□□□ -2.35
SSH4P32343 YGL041CYGL041C 204 nt0.38□□□□□ -2.35
SSH4P32343 RCO1YMR075W 2055 nt0.37□□□□□ -2.35
SSH4P32343 PRP39YML046W 1890 nt0.37□□□□□ -2.35
SSH4P32343 YBR131C-AYBR131C-A 90 nt0.35□□□□□ -2.35
SSH4P32343 TAH1YCR060W 336 nt0.34□□□□□ -2.36
SSH4P32343 ESP1YGR098C 4893 nt0.34□□□□□ -2.36
SSH4P32343 GLG1YKR058W 1851 nt0.34□□□□□ -2.36
SSH4P32343 YBL100W-BYBL100W-B 5313 nt0.33□□□□□ -2.36
SSH4P32343 YNL097C-BYNL097C-B 123 nt0.33□□□□□ -2.36
SSH4P32343 YOR302WYOR302W 78 nt0.33□□□□□ -2.36
SSH4P32343 YER078W-AYER078W-A 165 nt0.32□□□□□ -2.36
SSH4P32343 YOR186C-AYOR186C-A 210 nt0.31□□□□□ -2.36
SSH4P32343 YOL013W-AYOL013W-A 192 nt0.3□□□□□ -2.36
SSH4P32343 YEL073CYEL073C 324 nt0.29□□□□□ -2.36
SSH4P32343 YBL039C-AYBL039C-A 84 nt0.29□□□□□ -2.36
SSH4P32343 YMR158W-BYMR158W-B 321 nt0.29□□□□□ -2.36
SSH4P32343 YNL054W-BYNL054W-B 5250 nt0.27□□□□□ -2.37
SSH4P32343 SDH6YDR379C-A 240 nt0.27□□□□□ -2.37
SSH4P32343 snR80snR80 171 nt0.25□□□□□ -2.37
SSH4P32343 YJL182CYJL182C 318 nt0.24□□□□□ -2.37
SSH4P32343 snR8snR8 190 nt0.23□□□□□ -2.37
SSH4P32343 YGL182CYGL182C 324 nt0.23□□□□□ -2.37
SSH4P32343 COG6YNL041C 2520 nt0.22□□□□□ -2.37
SSH4P32343 YDR544CYDR544C 429 nt0.21□□□□□ -2.38
SSH4P32343 YEL014CYEL014C 306 nt0.2□□□□□ -2.38
SSH4P32343 YOR314W-AYOR314W-A 111 nt0.18□□□□□ -2.38
SSH4P32343 CSE1YGL238W 2883 nt0.17□□□□□ -2.38
SSH4P32343 YBR099CYBR099C 384 nt0.15□□□□□ -2.39
SSH4P32343 YOR381W-AYOR381W-A 168 nt0.13□□□□□ -2.39
SSH4P32343 snR46snR46 197 nt0.13□□□□□ -2.39
SSH4P32343 YPL060C-AYPL060C-A 3315 nt0.12□□□□□ -2.39
SSH4P32343 SOV1YMR066W 2697 nt0.11□□□□□ -2.39
SSH4P32343 YOR170WYOR170W 306 nt0.11□□□□□ -2.39
SSH4P32343 snR45snR45 172 nt0.05□□□□□ -2.4
SSH4P32343 YLR342W-AYLR342W-A 174 nt0.01□□□□□ -2.41
SSH4P32343 EST1YLR233C 2100 nt0.01□□□□□ -2.41
SSH4P32343 snR52snR52 92 nt0□□□□□ -2.41
Retrieved 100 of 7,029 protein–RNA pairs in 7.1 ms