Protein–RNA interactions for Protein: P32319

PEP1, Vacuolar protein sorting/targeting protein VPS10, yeastyeast

Predictions only

Length 1,579 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PEP1P32319 YNL205CYNL205C 423 nt-3.42□□□□□ -2.96
PEP1P32319 YDR220CYDR220C 294 nt-3.46□□□□□ -2.96
PEP1P32319 YNL303WYNL303W 348 nt-3.46□□□□□ -2.96
PEP1P32319 YMR315W-AYMR315W-A 108 nt-3.46□□□□□ -2.96
PEP1P32319 YKL083WYKL083W 615 nt-3.48□□□□□ -2.97
PEP1P32319 YNL146C-AYNL146C-A 195 nt-3.48□□□□□ -2.97
PEP1P32319 YNL171CYNL171C 369 nt-3.5□□□□□ -2.97
PEP1P32319 BUD26YDR241W 288 nt-3.51□□□□□ -2.97
PEP1P32319 RPS27BYHR021C 249 nt-3.52□□□□□ -2.97
PEP1P32319 YMR193C-AYMR193C-A 387 nt-3.52□□□□□ -2.97
PEP1P32319 YER090C-AYER090C-A 90 nt-3.53□□□□□ -2.97
PEP1P32319 YAF9YNL107W 681 nt-3.53□□□□□ -2.97
PEP1P32319 BI2Q0110 1272 nt-3.54□□□□□ -2.98
PEP1P32319 tQ(UUG)QtQ(UUG)Q 76 nt-3.55□□□□□ -2.98
PEP1P32319 YEL020C-BYEL020C-B 198 nt-3.55□□□□□ -2.98
PEP1P32319 YHR007C-AYHR007C-A 216 nt-3.55□□□□□ -2.98
PEP1P32319 YMR013C-AYMR013C-A 150 nt-3.55□□□□□ -2.98
PEP1P32319 YFL012WYFL012W 447 nt-3.57□□□□□ -2.98
PEP1P32319 YPR039WYPR039W 336 nt-3.59□□□□□ -2.98
PEP1P32319 YIR021W-AYIR021W-A 213 nt-3.59□□□□□ -2.98
PEP1P32319 YNL266WYNL266W 420 nt-3.59□□□□□ -2.98
PEP1P32319 RPS30AYLR287C-A 192 nt-3.6□□□□□ -2.99
PEP1P32319 YLR202CYLR202C 327 nt-3.61□□□□□ -2.99
PEP1P32319 YHR050W-AYHR050W-A 171 nt-3.62□□□□□ -2.99
PEP1P32319 YML054C-AYML054C-A 159 nt-3.62□□□□□ -2.99
PEP1P32319 YPR002C-AYPR002C-A 198 nt-3.62□□□□□ -2.99
PEP1P32319 MRPL32YCR003W 552 nt-3.63□□□□□ -2.99
PEP1P32319 PRM3YPL192C 402 nt-3.67□□□□□ -3
PEP1P32319 YOR309CYOR309C 381 nt-3.7□□□□□ -3
PEP1P32319 YDR048CYDR048C 315 nt-3.71□□□□□ -3
PEP1P32319 POP6YGR030C 477 nt-3.72□□□□□ -3.01
PEP1P32319 YMR172C-AYMR172C-A 384 nt-3.72□□□□□ -3.01
PEP1P32319 snR50snR50 90 nt-3.75□□□□□ -3.01
PEP1P32319 YDR426CYDR426C 378 nt-3.78□□□□□ -3.01
PEP1P32319 YGR270C-AYGR270C-A 219 nt-3.78□□□□□ -3.01
PEP1P32319 TOM22YNL131W 459 nt-3.78□□□□□ -3.01
PEP1P32319 GPI15YNL038W 690 nt-3.8□□□□□ -3.02
PEP1P32319 YJR162CYJR162C 351 nt-3.81□□□□□ -3.02
PEP1P32319 YNL337WYNL337W 255 nt-3.81□□□□□ -3.02
PEP1P32319 YDR544CYDR544C 429 nt-3.86□□□□□ -3.03
PEP1P32319 YDL011CYDL011C 324 nt-3.88□□□□□ -3.03
PEP1P32319 ATP19YOL077W-A 207 nt-3.89□□□□□ -3.03
PEP1P32319 IRC13YOR235W 315 nt-3.89□□□□□ -3.03
PEP1P32319 YOL083C-AYOL083C-A 141 nt-3.89□□□□□ -3.03
PEP1P32319 snR67snR67 82 nt-3.93□□□□□ -3.04
PEP1P32319 snR69snR69 101 nt-3.96□□□□□ -3.04
PEP1P32319 YLR163W-AYLR163W-A 114 nt-3.97□□□□□ -3.04
PEP1P32319 YGR069WYGR069W 336 nt-3.97□□□□□ -3.05
PEP1P32319 YOR314W-AYOR314W-A 111 nt-3.98□□□□□ -3.05
PEP1P32319 YLR269CYLR269C 351 nt-4.04□□□□□ -3.06
PEP1P32319 YML099W-AYML099W-A 330 nt-4.05□□□□□ -3.06
PEP1P32319 YDR524W-CYDR524W-C 90 nt-4.06□□□□□ -3.06
PEP1P32319 YIL029CYIL029C 429 nt-4.08□□□□□ -3.06
PEP1P32319 PCC1YKR095W-A 267 nt-4.12□□□□□ -3.07
PEP1P32319 YOR008C-AYOR008C-A 225 nt-4.14□□□□□ -3.07
PEP1P32319 YGL149WYGL149W 306 nt-4.18□□□□□ -3.08
PEP1P32319 snR57snR57 88 nt-4.19□□□□□ -3.08
PEP1P32319 YDR102CYDR102C 333 nt-4.19□□□□□ -3.08
PEP1P32319 YLR217WYLR217W 324 nt-4.2□□□□□ -3.08
PEP1P32319 TSC3YBR058C-A 243 nt-4.2□□□□□ -3.08
PEP1P32319 YBL071CYBL071C 309 nt-4.22□□□□□ -3.08
PEP1P32319 snR9snR9 187 nt-4.23□□□□□ -3.09
PEP1P32319 YLR342W-AYLR342W-A 174 nt-4.27□□□□□ -3.09
PEP1P32319 HMRA1YCR097W 381 nt-4.27□□□□□ -3.09
PEP1P32319 YLL019W-AYLL019W-A 93 nt-4.27□□□□□ -3.09
PEP1P32319 YBR182C-AYBR182C-A 195 nt-4.27□□□□□ -3.09
PEP1P32319 YJL197C-AYJL197C-A 282 nt-4.34□□□□□ -3.1
PEP1P32319 YER175W-AYER175W-A 165 nt-4.36□□□□□ -3.11
PEP1P32319 YGR174W-AYGR174W-A 87 nt-4.36□□□□□ -3.11
PEP1P32319 YER137W-AYER137W-A 306 nt-4.38□□□□□ -3.11
PEP1P32319 AI5_BETAQ0075 1065 nt-4.42□□□□□ -3.12
PEP1P32319 YOR376W-AYOR376W-A 156 nt-4.45□□□□□ -3.12
PEP1P32319 YDL158CYDL158C 309 nt-4.47□□□□□ -3.12
PEP1P32319 YDL016CYDL016C 303 nt-4.52□□□□□ -3.13
PEP1P32319 ATG16YMR159C 453 nt-4.53□□□□□ -3.13
PEP1P32319 YLR286W-AYLR286W-A 135 nt-4.54□□□□□ -3.14
PEP1P32319 tD(GUC)QtD(GUC)Q 75 nt-4.58□□□□□ -3.14
PEP1P32319 YER097WYER097W 330 nt-4.61□□□□□ -3.15
PEP1P32319 YIL115W-AYIL115W-A 372 nt-4.63□□□□□ -3.15
PEP1P32319 YAR047CYAR047C 321 nt-4.65□□□□□ -3.15
PEP1P32319 YGR146C-AYGR146C-A 162 nt-4.7□□□□□ -3.16
PEP1P32319 YOR316C-AYOR316C-A 210 nt-4.7□□□□□ -3.16
PEP1P32319 YOR072W-BYOR072W-B 162 nt-4.71□□□□□ -3.16
PEP1P32319 YDL159C-BYDL159C-B 177 nt-4.74□□□□□ -3.17
PEP1P32319 YPR197CYPR197C 564 nt-4.78□□□□□ -3.18
PEP1P32319 YBR196C-AYBR196C-A 150 nt-4.79□□□□□ -3.18
PEP1P32319 YER181CYER181C 324 nt-4.8□□□□□ -3.18
PEP1P32319 YDR524C-AYDR524C-A 120 nt-4.82□□□□□ -3.18
PEP1P32319 YFL019CYFL019C 354 nt-4.91□□□□□ -3.19
PEP1P32319 CSN9YDR179C 489 nt-4.91□□□□□ -3.2
PEP1P32319 YFL032WYFL032W 321 nt-4.91□□□□□ -3.2
PEP1P32319 STE18YJR086W 333 nt-4.91□□□□□ -3.2
PEP1P32319 snR55snR55 98 nt-4.92□□□□□ -3.2
PEP1P32319 tM(CAU)Q2tM(CAU)Q2 78 nt-4.92□□□□□ -3.2
PEP1P32319 YBR178WYBR178W 375 nt-4.93□□□□□ -3.2
PEP1P32319 YLR406C-AYLR406C-A 150 nt-4.94□□□□□ -3.2
PEP1P32319 snR6snR6 112 nt-4.95□□□□□ -3.2
PEP1P32319 MPC1YGL080W 393 nt-4.96□□□□□ -3.2
PEP1P32319 YOL155W-AYOL155W-A 135 nt-4.97□□□□□ -3.21
PEP1P32319 YJR157WYJR157W 363 nt-4.99□□□□□ -3.21
Retrieved 100 of 7,029 protein–RNA pairs in 19.5 ms