Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
SLC6A4P31645 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SLC6A4P31645 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.55■□□□□ 0.88
SLC6A4P31645 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SLC6A4P31645 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
SLC6A4P31645 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SLC6A4P31645 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SLC6A4P31645 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SLC6A4P31645 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.55■□□□□ 0.88
SLC6A4P31645 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.55■□□□□ 0.88
SLC6A4P31645 FAM197Y4-202ENST00000622692 608 ntBASIC20.55■□□□□ 0.88
SLC6A4P31645 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC6A4P31645 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC6A4P31645 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC6A4P31645 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SLC6A4P31645 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SLC6A4P31645 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.55■□□□□ 0.88
SLC6A4P31645 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
SLC6A4P31645 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC6A4P31645 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC6A4P31645 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
SLC6A4P31645 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.54■□□□□ 0.88
SLC6A4P31645 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC6A4P31645 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC6A4P31645 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC6A4P31645 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC6A4P31645 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.54■□□□□ 0.88
SLC6A4P31645 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.54■□□□□ 0.88
SLC6A4P31645 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SLC6A4P31645 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.54■□□□□ 0.88
SLC6A4P31645 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.54■□□□□ 0.88
SLC6A4P31645 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.54■□□□□ 0.88
SLC6A4P31645 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.54■□□□□ 0.88
SLC6A4P31645 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.54■□□□□ 0.88
SLC6A4P31645 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SLC6A4P31645 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
SLC6A4P31645 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.54■□□□□ 0.88
SLC6A4P31645 AL121829.2-201ENST00000620908 328 ntBASIC20.54■□□□□ 0.88
SLC6A4P31645 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SLC6A4P31645 AL157384.1-201ENST00000445995 2473 ntBASIC20.54■□□□□ 0.88
SLC6A4P31645 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.54■□□□□ 0.88
SLC6A4P31645 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.54■□□□□ 0.88
SLC6A4P31645 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.54■□□□□ 0.88
SLC6A4P31645 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.54■□□□□ 0.88
SLC6A4P31645 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.54■□□□□ 0.88
SLC6A4P31645 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC6A4P31645 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
SLC6A4P31645 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.53■□□□□ 0.88
SLC6A4P31645 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SLC6A4P31645 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC6A4P31645 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC6A4P31645 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
SLC6A4P31645 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.53■□□□□ 0.88
SLC6A4P31645 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC6A4P31645 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.53■□□□□ 0.88
SLC6A4P31645 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC6A4P31645 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC6A4P31645 KRASP1-201ENST00000407852 552 ntBASIC20.53■□□□□ 0.88
SLC6A4P31645 AC239809.2-201ENST00000415381 517 ntBASIC20.53■□□□□ 0.88
SLC6A4P31645 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.53■□□□□ 0.88
SLC6A4P31645 AC093827.2-201ENST00000512654 315 ntBASIC20.53■□□□□ 0.88
SLC6A4P31645 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.53■□□□□ 0.88
SLC6A4P31645 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.53■□□□□ 0.88
SLC6A4P31645 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SLC6A4P31645 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.53■□□□□ 0.88
SLC6A4P31645 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC6A4P31645 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC6A4P31645 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC6A4P31645 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.53■□□□□ 0.88
SLC6A4P31645 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SLC6A4P31645 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
SLC6A4P31645 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC6A4P31645 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SLC6A4P31645 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC6A4P31645 GABARAPL3-202ENST00000624044 1851 ntBASIC20.52■□□□□ 0.88
SLC6A4P31645 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.52■□□□□ 0.88
SLC6A4P31645 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.52■□□□□ 0.88
SLC6A4P31645 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SLC6A4P31645 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.52■□□□□ 0.88
SLC6A4P31645 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.52■□□□□ 0.88
SLC6A4P31645 AC133681.1-201ENST00000465482 601 ntBASIC20.52■□□□□ 0.88
SLC6A4P31645 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.52■□□□□ 0.88
SLC6A4P31645 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.52■□□□□ 0.88
SLC6A4P31645 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.52■□□□□ 0.88
SLC6A4P31645 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.52■□□□□ 0.88
SLC6A4P31645 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.52■□□□□ 0.88
SLC6A4P31645 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
SLC6A4P31645 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.52■□□□□ 0.88
SLC6A4P31645 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
SLC6A4P31645 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC6A4P31645 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC6A4P31645 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.51■□□□□ 0.87
SLC6A4P31645 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC6A4P31645 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC6A4P31645 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC6A4P31645 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SLC6A4P31645 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC6A4P31645 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SLC6A4P31645 UBE2SP1-201ENST00000450587 669 ntBASIC20.51■□□□□ 0.87
SLC6A4P31645 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms