Protein–RNA interactions for Protein: P23634

ATP2B4, Plasma membrane calcium-transporting ATPase 4, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4P23634 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC24.35■■□□□ 1.49
ATP2B4P23634 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC24.35■■□□□ 1.49
ATP2B4P23634 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC24.35■■□□□ 1.49
ATP2B4P23634 RN7SL850P-201ENST00000579959 291 ntBASIC24.35■■□□□ 1.49
ATP2B4P23634 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
ATP2B4P23634 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
ATP2B4P23634 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC24.35■■□□□ 1.49
ATP2B4P23634 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
ATP2B4P23634 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
ATP2B4P23634 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
ATP2B4P23634 AC133561.1-201ENST00000568600 2415 ntBASIC24.34■■□□□ 1.49
ATP2B4P23634 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
ATP2B4P23634 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC24.34■■□□□ 1.49
ATP2B4P23634 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC24.34■■□□□ 1.49
ATP2B4P23634 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
ATP2B4P23634 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
ATP2B4P23634 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
ATP2B4P23634 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC24.34■■□□□ 1.49
ATP2B4P23634 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
ATP2B4P23634 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
ATP2B4P23634 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
ATP2B4P23634 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
ATP2B4P23634 FP700111.2-201ENST00000619190 1892 ntBASIC24.34■■□□□ 1.49
ATP2B4P23634 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
ATP2B4P23634 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC24.33■■□□□ 1.49
ATP2B4P23634 FITM1-202ENST00000559294 800 ntBASIC24.33■■□□□ 1.49
ATP2B4P23634 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC24.33■■□□□ 1.49
ATP2B4P23634 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC24.33■■□□□ 1.49
ATP2B4P23634 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC24.33■■□□□ 1.49
ATP2B4P23634 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
ATP2B4P23634 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
ATP2B4P23634 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
ATP2B4P23634 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC24.33■■□□□ 1.48
ATP2B4P23634 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC24.32■■□□□ 1.48
ATP2B4P23634 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC24.32■■□□□ 1.48
ATP2B4P23634 AP006587.1-201ENST00000534129 1502 ntBASIC24.32■■□□□ 1.48
ATP2B4P23634 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
ATP2B4P23634 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
ATP2B4P23634 DPP3P2-201ENST00000416030 1696 ntBASIC24.32■■□□□ 1.48
ATP2B4P23634 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC24.32■■□□□ 1.48
ATP2B4P23634 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
ATP2B4P23634 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
ATP2B4P23634 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC24.32■■□□□ 1.48
ATP2B4P23634 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC24.32■■□□□ 1.48
ATP2B4P23634 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC24.32■■□□□ 1.48
ATP2B4P23634 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
ATP2B4P23634 AC005363.2-201ENST00000618631 242 ntBASIC24.32■■□□□ 1.48
ATP2B4P23634 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
ATP2B4P23634 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
ATP2B4P23634 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC24.32■■□□□ 1.48
ATP2B4P23634 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
ATP2B4P23634 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC24.32■■□□□ 1.48
ATP2B4P23634 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC24.32■■□□□ 1.48
ATP2B4P23634 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
ATP2B4P23634 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC24.31■■□□□ 1.48
ATP2B4P23634 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
ATP2B4P23634 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
ATP2B4P23634 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
ATP2B4P23634 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
ATP2B4P23634 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
ATP2B4P23634 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
ATP2B4P23634 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC24.31■■□□□ 1.48
ATP2B4P23634 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
ATP2B4P23634 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
ATP2B4P23634 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC24.31■■□□□ 1.48
ATP2B4P23634 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
ATP2B4P23634 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
ATP2B4P23634 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC24.31■■□□□ 1.48
ATP2B4P23634 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
ATP2B4P23634 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC24.3■■□□□ 1.48
ATP2B4P23634 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC24.3■■□□□ 1.48
ATP2B4P23634 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC24.3■■□□□ 1.48
ATP2B4P23634 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC24.3■■□□□ 1.48
ATP2B4P23634 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC24.3■■□□□ 1.48
ATP2B4P23634 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC24.3■■□□□ 1.48
ATP2B4P23634 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC24.3■■□□□ 1.48
ATP2B4P23634 C1QL1P1-201ENST00000568105 661 ntBASIC24.3■■□□□ 1.48
ATP2B4P23634 P4HB-223ENST00000576390 439 ntTSL 4 BASIC24.3■■□□□ 1.48
ATP2B4P23634 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
ATP2B4P23634 AC092865.7-201ENST00000641832 219 ntBASIC24.3■■□□□ 1.48
ATP2B4P23634 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
ATP2B4P23634 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC24.3■■□□□ 1.48
ATP2B4P23634 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
ATP2B4P23634 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
ATP2B4P23634 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC24.3■■□□□ 1.48
ATP2B4P23634 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
ATP2B4P23634 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
ATP2B4P23634 AC116351.2-201ENST00000606540 1585 ntBASIC24.29■■□□□ 1.48
ATP2B4P23634 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
ATP2B4P23634 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
ATP2B4P23634 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC24.29■■□□□ 1.48
ATP2B4P23634 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
ATP2B4P23634 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC24.29■■□□□ 1.48
ATP2B4P23634 AL390955.1-201ENST00000428694 934 ntBASIC24.29■■□□□ 1.48
ATP2B4P23634 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC24.29■■□□□ 1.48
ATP2B4P23634 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
ATP2B4P23634 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC24.29■■□□□ 1.48
ATP2B4P23634 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC24.29■■□□□ 1.48
ATP2B4P23634 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC24.29■■□□□ 1.48
ATP2B4P23634 AC006128.1-201ENST00000624704 1661 ntBASIC24.29■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms