Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
MMP8P22894 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.05■□□□□ 0.96
MMP8P22894 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.05■□□□□ 0.96
MMP8P22894 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.05■□□□□ 0.96
MMP8P22894 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.05■□□□□ 0.96
MMP8P22894 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
MMP8P22894 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
MMP8P22894 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MMP8P22894 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MMP8P22894 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
MMP8P22894 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
MMP8P22894 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MMP8P22894 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
MMP8P22894 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC21.04■□□□□ 0.96
MMP8P22894 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21.04■□□□□ 0.96
MMP8P22894 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
MMP8P22894 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
MMP8P22894 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
MMP8P22894 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC21.04■□□□□ 0.96
MMP8P22894 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MMP8P22894 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MMP8P22894 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
MMP8P22894 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.04■□□□□ 0.96
MMP8P22894 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.04■□□□□ 0.96
MMP8P22894 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.04■□□□□ 0.96
MMP8P22894 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.04■□□□□ 0.96
MMP8P22894 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MMP8P22894 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MMP8P22894 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MMP8P22894 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
MMP8P22894 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC21.03■□□□□ 0.96
MMP8P22894 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC21.03■□□□□ 0.96
MMP8P22894 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MMP8P22894 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
MMP8P22894 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MMP8P22894 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
MMP8P22894 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.03■□□□□ 0.96
MMP8P22894 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
MMP8P22894 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MMP8P22894 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
MMP8P22894 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
MMP8P22894 CRK-204ENST00000574295 1391 ntTSL 5 BASIC21.03■□□□□ 0.96
MMP8P22894 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.03■□□□□ 0.96
MMP8P22894 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.03■□□□□ 0.96
MMP8P22894 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
MMP8P22894 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.03■□□□□ 0.96
MMP8P22894 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
MMP8P22894 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.03■□□□□ 0.96
MMP8P22894 AL138781.1-201ENST00000566567 1274 ntBASIC21.03■□□□□ 0.96
MMP8P22894 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.03■□□□□ 0.96
MMP8P22894 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MMP8P22894 MYC-209ENST00000641252 345 ntBASIC21.03■□□□□ 0.96
MMP8P22894 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
MMP8P22894 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.03■□□□□ 0.96
MMP8P22894 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC21.03■□□□□ 0.96
MMP8P22894 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC21.03■□□□□ 0.96
MMP8P22894 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MMP8P22894 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC21.03■□□□□ 0.96
MMP8P22894 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
MMP8P22894 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.03■□□□□ 0.96
MMP8P22894 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
MMP8P22894 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
MMP8P22894 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
MMP8P22894 AC009237.14-201ENST00000609975 1594 ntBASIC21.02■□□□□ 0.96
MMP8P22894 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.02■□□□□ 0.96
MMP8P22894 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
MMP8P22894 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.02■□□□□ 0.96
MMP8P22894 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
MMP8P22894 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC21.02■□□□□ 0.96
MMP8P22894 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.02■□□□□ 0.96
MMP8P22894 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.02■□□□□ 0.96
MMP8P22894 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.02■□□□□ 0.96
MMP8P22894 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.02■□□□□ 0.96
MMP8P22894 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.02■□□□□ 0.96
MMP8P22894 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.02■□□□□ 0.96
MMP8P22894 AL109923.1-201ENST00000618799 583 ntBASIC21.02■□□□□ 0.96
MMP8P22894 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.02■□□□□ 0.96
MMP8P22894 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
MMP8P22894 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
MMP8P22894 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MMP8P22894 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MMP8P22894 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MMP8P22894 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
MMP8P22894 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC21.02■□□□□ 0.95
MMP8P22894 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
MMP8P22894 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
MMP8P22894 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21.02■□□□□ 0.95
MMP8P22894 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MMP8P22894 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
MMP8P22894 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.01■□□□□ 0.95
MMP8P22894 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
MMP8P22894 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
MMP8P22894 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MMP8P22894 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
MMP8P22894 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC21.01■□□□□ 0.95
MMP8P22894 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC21.01■□□□□ 0.95
MMP8P22894 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.01■□□□□ 0.95
MMP8P22894 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
MMP8P22894 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC21.01■□□□□ 0.95
MMP8P22894 AC098934.4-201ENST00000564127 592 ntBASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms