Protein–RNA interactions for Protein: P20436

RPB8, DNA-directed RNA polymerases I, II, and III subunit RPABC3, yeastyeast

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPB8P20436 PRP42YDR235W 1635 nt1.04□□□□□ -2.24
RPB8P20436 YML002WYML002W 2214 nt1.02□□□□□ -2.25
RPB8P20436 IML1YJR138W 4755 nt1.01□□□□□ -2.25
RPB8P20436 PRP5YBR237W 2550 nt1□□□□□ -2.25
RPB8P20436 tV(UAC)BtV(UAC)B 74 nt1□□□□□ -2.25
RPB8P20436 tV(UAC)DtV(UAC)D 74 nt1□□□□□ -2.25
RPB8P20436 SEC8YPR055W 3198 nt1□□□□□ -2.25
RPB8P20436 SIP4YJL089W 2490 nt1□□□□□ -2.25
RPB8P20436 FYV10YIL097W 1551 nt1□□□□□ -2.25
RPB8P20436 YPR160W-AYPR160W-A 81 nt0.99□□□□□ -2.25
RPB8P20436 SPT7YBR081C 3999 nt0.98□□□□□ -2.25
RPB8P20436 YLR399W-AYLR399W-A 105 nt0.97□□□□□ -2.25
RPB8P20436 YBL053WYBL053W 375 nt0.97□□□□□ -2.25
RPB8P20436 VAM6YDL077C 3150 nt0.97□□□□□ -2.25
RPB8P20436 EMT1tM(CAU)D 73 nt0.96□□□□□ -2.26
RPB8P20436 EMT5tM(CAU)J1 73 nt0.96□□□□□ -2.26
RPB8P20436 EMT3tM(CAU)J2 73 nt0.96□□□□□ -2.26
RPB8P20436 YGL182CYGL182C 324 nt0.96□□□□□ -2.26
RPB8P20436 EMT4tM(CAU)M 73 nt0.96□□□□□ -2.26
RPB8P20436 EMT2tM(CAU)O2 73 nt0.96□□□□□ -2.26
RPB8P20436 YBL039C-AYBL039C-A 84 nt0.96□□□□□ -2.26
RPB8P20436 YDL007C-AYDL007C-A 258 nt0.94□□□□□ -2.26
RPB8P20436 tN(GUU)QtN(GUU)Q 71 nt0.94□□□□□ -2.26
RPB8P20436 UTP8YGR128C 2142 nt0.94□□□□□ -2.26
RPB8P20436 BEM2YER155C 6504 nt0.93□□□□□ -2.26
RPB8P20436 BUD3YCL014W 4911 nt0.93□□□□□ -2.26
RPB8P20436 TAH1YCR060W 336 nt0.93□□□□□ -2.26
RPB8P20436 YOR170WYOR170W 306 nt0.93□□□□□ -2.26
RPB8P20436 snR48snR48 113 nt0.93□□□□□ -2.26
RPB8P20436 RKR1YMR247C 4689 nt0.92□□□□□ -2.26
RPB8P20436 YNL284C-BYNL284C-B 5268 nt0.92□□□□□ -2.26
RPB8P20436 CHS6YJL099W 2241 nt0.92□□□□□ -2.26
RPB8P20436 YHR131W-AYHR131W-A 246 nt0.91□□□□□ -2.26
RPB8P20436 YPR117WYPR117W 7470 nt0.88□□□□□ -2.27
RPB8P20436 YHL015W-AYHL015W-A 84 nt0.88□□□□□ -2.27
RPB8P20436 YLR232WYLR232W 348 nt0.88□□□□□ -2.27
RPB8P20436 YOR102WYOR102W 351 nt0.88□□□□□ -2.27
RPB8P20436 OST4YDL232W 111 nt0.87□□□□□ -2.27
RPB8P20436 SNU13YEL026W 381 nt0.87□□□□□ -2.27
RPB8P20436 tL(UAA)QtL(UAA)Q 85 nt0.87□□□□□ -2.27
RPB8P20436 SCC2YDR180W 4482 nt0.87□□□□□ -2.27
RPB8P20436 DOP1YDR141C 5097 nt0.85□□□□□ -2.27
RPB8P20436 RPM2YML091C 3609 nt0.85□□□□□ -2.27
RPB8P20436 UBP3YER151C 2739 nt0.84□□□□□ -2.28
RPB8P20436 YSP1YHR155W 3687 nt0.83□□□□□ -2.28
RPB8P20436 YDR544CYDR544C 429 nt0.82□□□□□ -2.28
RPB8P20436 YOR329W-AYOR329W-A 210 nt0.81□□□□□ -2.28
RPB8P20436 PAU24YBR301W 363 nt0.81□□□□□ -2.28
RPB8P20436 STF2YGR008C 255 nt0.8□□□□□ -2.28
RPB8P20436 YGR164WYGR164W 336 nt0.79□□□□□ -2.28
RPB8P20436 YOR314W-AYOR314W-A 111 nt0.79□□□□□ -2.28
RPB8P20436 YJR029WYJR029W 5268 nt0.79□□□□□ -2.28
RPB8P20436 YPR137C-BYPR137C-B 5268 nt0.79□□□□□ -2.28
RPB8P20436 HUG1YML058W-A 207 nt0.78□□□□□ -2.28
RPB8P20436 snR39BsnR39B 96 nt0.78□□□□□ -2.28
RPB8P20436 COG6YNL041C 2520 nt0.78□□□□□ -2.28
RPB8P20436 SEC1YDR164C 2175 nt0.77□□□□□ -2.29
RPB8P20436 ATP8Q0080 147 nt0.77□□□□□ -2.29
RPB8P20436 YPL060C-AYPL060C-A 3315 nt0.76□□□□□ -2.29
RPB8P20436 Q0092Q0092 141 nt0.76□□□□□ -2.29
RPB8P20436 BEM3YPL115C 3387 nt0.76□□□□□ -2.29
RPB8P20436 SDH6YDR379C-A 240 nt0.75□□□□□ -2.29
RPB8P20436 YJL127W-AYJL127W-A 117 nt0.75□□□□□ -2.29
RPB8P20436 BUL2YML111W 2763 nt0.74□□□□□ -2.29
RPB8P20436 QCR9YGR183C 201 nt0.74□□□□□ -2.29
RPB8P20436 ULP2YIL031W 3105 nt0.74□□□□□ -2.29
RPB8P20436 YNL170WYNL170W 396 nt0.72□□□□□ -2.29
RPB8P20436 YBR072C-AYBR072C-A 162 nt0.72□□□□□ -2.29
RPB8P20436 LTE1YAL024C 4308 nt0.72□□□□□ -2.29
RPB8P20436 NNF2YGR089W 2811 nt0.71□□□□□ -2.3
RPB8P20436 YDR210WYDR210W 228 nt0.71□□□□□ -2.3
RPB8P20436 GLG1YKR058W 1851 nt0.7□□□□□ -2.3
RPB8P20436 tM(CAU)Q2tM(CAU)Q2 78 nt0.7□□□□□ -2.3
RPB8P20436 YLL006W-AYLL006W-A 177 nt0.7□□□□□ -2.3
RPB8P20436 YNL067W-BYNL067W-B 141 nt0.7□□□□□ -2.3
RPB8P20436 YOR192C-BYOR192C-B 5313 nt0.7□□□□□ -2.3
RPB8P20436 NIP1YMR309C 2439 nt0.67□□□□□ -2.3
RPB8P20436 YIL142C-AYIL142C-A 333 nt0.66□□□□□ -2.3
RPB8P20436 PAU12YGR294W 363 nt0.64□□□□□ -2.31
RPB8P20436 MYO1YHR023W 5787 nt0.64□□□□□ -2.31
RPB8P20436 RPS26AYGL189C 360 nt0.63□□□□□ -2.31
RPB8P20436 YGR146C-AYGR146C-A 162 nt0.63□□□□□ -2.31
RPB8P20436 YIL071W-AYIL071W-A 477 nt0.63□□□□□ -2.31
RPB8P20436 YCL001W-BYCL001W-B 255 nt0.63□□□□□ -2.31
RPB8P20436 PET111YMR257C 2403 nt0.63□□□□□ -2.31
RPB8P20436 tT(AGU)BtT(AGU)B 73 nt0.62□□□□□ -2.31
RPB8P20436 tT(AGU)CtT(AGU)C 73 nt0.62□□□□□ -2.31
RPB8P20436 tT(AGU)DtT(AGU)D 73 nt0.62□□□□□ -2.31
RPB8P20436 tT(AGU)HtT(AGU)H 73 nt0.62□□□□□ -2.31
RPB8P20436 tT(AGU)I1tT(AGU)I1 73 nt0.62□□□□□ -2.31
RPB8P20436 tT(AGU)I2tT(AGU)I2 73 nt0.62□□□□□ -2.31
RPB8P20436 tT(AGU)JtT(AGU)J 73 nt0.62□□□□□ -2.31
RPB8P20436 tT(AGU)N1tT(AGU)N1 73 nt0.62□□□□□ -2.31
RPB8P20436 tT(AGU)N2tT(AGU)N2 73 nt0.62□□□□□ -2.31
RPB8P20436 tT(AGU)O1tT(AGU)O1 73 nt0.62□□□□□ -2.31
RPB8P20436 tT(AGU)O2tT(AGU)O2 73 nt0.62□□□□□ -2.31
RPB8P20436 YDR371C-AYDR371C-A 105 nt0.61□□□□□ -2.31
RPB8P20436 YPR159C-AYPR159C-A 102 nt0.6□□□□□ -2.31
RPB8P20436 YMR272W-AYMR272W-A 114 nt0.59□□□□□ -2.31
RPB8P20436 ORC3YLL004W 1851 nt0.57□□□□□ -2.32
Retrieved 100 of 7,029 protein–RNA pairs in 26.4 ms