Protein–RNA interactions for Protein: P20433

RPB4, DNA-directed RNA polymerase II subunit RPB4, yeastyeast

Predicted RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPB4P20433 tT(UGU)PtT(UGU)P 72 nt-0.78□□□□□ -2.53
RPB4P20433 CSE2YNR010W 450 nt-0.78□□□□□ -2.53
RPB4P20433 RPM2YML091C 3609 nt-0.79□□□□□ -2.54
RPB4P20433 YIL115W-AYIL115W-A 372 nt-0.8□□□□□ -2.54
RPB4P20433 AGA2YGL032C 264 nt-0.85□□□□□ -2.55
RPB4P20433 ATP19YOL077W-A 207 nt-0.85□□□□□ -2.55
RPB4P20433 YEL050W-AYEL050W-A 192 nt-0.87□□□□□ -2.55
RPB4P20433 YJL197C-AYJL197C-A 282 nt-0.88□□□□□ -2.55
RPB4P20433 YLR406C-AYLR406C-A 150 nt-0.88□□□□□ -2.55
RPB4P20433 YMR193C-AYMR193C-A 387 nt-0.89□□□□□ -2.55
RPB4P20433 snR161snR161 161 nt-0.89□□□□□ -2.55
RPB4P20433 YGR069WYGR069W 336 nt-0.9□□□□□ -2.55
RPB4P20433 YJL113WYJL113W 4647 nt-0.9□□□□□ -2.55
RPB4P20433 SDH6YDR379C-A 240 nt-0.91□□□□□ -2.56
RPB4P20433 TAH1YCR060W 336 nt-0.92□□□□□ -2.56
RPB4P20433 YER053C-AYER053C-A 114 nt-0.92□□□□□ -2.56
RPB4P20433 YLL019W-AYLL019W-A 93 nt-0.93□□□□□ -2.56
RPB4P20433 YKL063CYKL063C 504 nt-0.94□□□□□ -2.56
RPB4P20433 snR33snR33 183 nt-0.95□□□□□ -2.56
RPB4P20433 YHL009W-BYHL009W-B 5409 nt-0.95□□□□□ -2.56
RPB4P20433 YDR048CYDR048C 315 nt-0.96□□□□□ -2.56
RPB4P20433 YLR202CYLR202C 327 nt-0.96□□□□□ -2.56
RPB4P20433 YDL158CYDL158C 309 nt-0.97□□□□□ -2.56
RPB4P20433 YOR121CYOR121C 306 nt-0.97□□□□□ -2.56
RPB4P20433 snR36snR36 182 nt-0.97□□□□□ -2.56
RPB4P20433 YER137W-AYER137W-A 306 nt-0.98□□□□□ -2.57
RPB4P20433 YIL071W-AYIL071W-A 477 nt-1.01□□□□□ -2.57
RPB4P20433 tW(UCA)QtW(UCA)Q 74 nt-1.01□□□□□ -2.57
RPB4P20433 YMR001C-AYMR001C-A 231 nt-1.01□□□□□ -2.57
RPB4P20433 YNL067W-BYNL067W-B 141 nt-1.01□□□□□ -2.57
RPB4P20433 YPR016W-AYPR016W-A 261 nt-1.02□□□□□ -2.57
RPB4P20433 YDL007C-AYDL007C-A 258 nt-1.04□□□□□ -2.58
RPB4P20433 APQ12YIL040W 417 nt-1.04□□□□□ -2.58
RPB4P20433 YLR264C-AYLR264C-A 117 nt-1.04□□□□□ -2.58
RPB4P20433 YBR285WYBR285W 435 nt-1.04□□□□□ -2.58
RPB4P20433 YIL002W-AYIL002W-A 210 nt-1.07□□□□□ -2.58
RPB4P20433 YOR072W-BYOR072W-B 162 nt-1.07□□□□□ -2.58
RPB4P20433 YBR223W-AYBR223W-A 120 nt-1.08□□□□□ -2.58
RPB4P20433 snR60snR60 104 nt-1.09□□□□□ -2.58
RPB4P20433 YER079WYER079W 633 nt-1.09□□□□□ -2.58
RPB4P20433 BIL1YOR304C-A 231 nt-1.09□□□□□ -2.58
RPB4P20433 YCR038W-AYCR038W-A 126 nt-1.1□□□□□ -2.59
RPB4P20433 HMRA1YCR097W 381 nt-1.1□□□□□ -2.59
RPB4P20433 snR189snR189 189 nt-1.12□□□□□ -2.59
RPB4P20433 COG6YNL041C 2520 nt-1.12□□□□□ -2.59
RPB4P20433 tA(UGC)QtA(UGC)Q 76 nt-1.13□□□□□ -2.59
RPB4P20433 YML100W-AYML100W-A 174 nt-1.14□□□□□ -2.59
RPB4P20433 YDR544CYDR544C 429 nt-1.17□□□□□ -2.6
RPB4P20433 YPL060C-AYPL060C-A 3315 nt-1.19□□□□□ -2.6
RPB4P20433 YIL032CYIL032C 357 nt-1.23□□□□□ -2.61
RPB4P20433 HTL1YCR020W-B 237 nt-1.24□□□□□ -2.61
RPB4P20433 YNL028WYNL028W 318 nt-1.25□□□□□ -2.61
RPB4P20433 YNR077CYNR077C 255 nt-1.25□□□□□ -2.61
RPB4P20433 YAL063C-AYAL063C-A 291 nt-1.26□□□□□ -2.61
RPB4P20433 YGL149WYGL149W 306 nt-1.27□□□□□ -2.61
RPB4P20433 YNL324WYNL324W 396 nt-1.27□□□□□ -2.61
RPB4P20433 YGR035CYGR035C 351 nt-1.28□□□□□ -2.61
RPB4P20433 PAU9YBL108C-A 129 nt-1.28□□□□□ -2.61
RPB4P20433 YAL016C-BYAL016C-B 186 nt-1.3□□□□□ -2.62
RPB4P20433 YAL068W-AYAL068W-A 255 nt-1.3□□□□□ -2.62
RPB4P20433 YGL052WYGL052W 306 nt-1.32□□□□□ -2.62
RPB4P20433 YJL077W-AYJL077W-A 87 nt-1.32□□□□□ -2.62
RPB4P20433 YOR314W-AYOR314W-A 111 nt-1.32□□□□□ -2.62
RPB4P20433 YOR015WYOR015W 360 nt-1.33□□□□□ -2.62
RPB4P20433 YBL039C-AYBL039C-A 84 nt-1.35□□□□□ -2.63
RPB4P20433 YML099W-AYML099W-A 330 nt-1.36□□□□□ -2.63
RPB4P20433 YAF9YNL107W 681 nt-1.36□□□□□ -2.63
RPB4P20433 YLR120W-AYLR120W-A 102 nt-1.37□□□□□ -2.63
RPB4P20433 snR74snR74 88 nt-1.39□□□□□ -2.63
RPB4P20433 YJL182CYJL182C 318 nt-1.39□□□□□ -2.63
RPB4P20433 ATP6Q0085 780 nt-1.43□□□□□ -2.64
RPB4P20433 YOR293C-AYOR293C-A 150 nt-1.43□□□□□ -2.64
RPB4P20433 YPR010C-AYPR010C-A 219 nt-1.46□□□□□ -2.64
RPB4P20433 tQ(UUG)QtQ(UUG)Q 76 nt-1.47□□□□□ -2.64
RPB4P20433 YJR157WYJR157W 363 nt-1.48□□□□□ -2.65
RPB4P20433 snR49snR49 165 nt-1.48□□□□□ -2.65
RPB4P20433 YDR102CYDR102C 333 nt-1.5□□□□□ -2.65
RPB4P20433 YDR183C-AYDR183C-A 258 nt-1.52□□□□□ -2.65
RPB4P20433 YGL182CYGL182C 324 nt-1.52□□□□□ -2.65
RPB4P20433 YMR172C-AYMR172C-A 384 nt-1.53□□□□□ -2.65
RPB4P20433 tP(UGG)QtP(UGG)Q 72 nt-1.55□□□□□ -2.66
RPB4P20433 YFL032WYFL032W 321 nt-1.56□□□□□ -2.66
RPB4P20433 YLR154W-FYLR154W-F 141 nt-1.56□□□□□ -2.66
RPB4P20433 YOR170WYOR170W 306 nt-1.56□□□□□ -2.66
RPB4P20433 snR69snR69 101 nt-1.58□□□□□ -2.66
RPB4P20433 YER090C-AYER090C-A 90 nt-1.61□□□□□ -2.67
RPB4P20433 YGL041CYGL041C 204 nt-1.66□□□□□ -2.68
RPB4P20433 SKI7YOR076C 2244 nt-1.67□□□□□ -2.68
RPB4P20433 YNL266WYNL266W 420 nt-1.68□□□□□ -2.68
RPB4P20433 YER097WYER097W 330 nt-1.69□□□□□ -2.68
RPB4P20433 RDS3YPR094W 324 nt-1.7□□□□□ -2.68
RPB4P20433 snR50snR50 90 nt-1.72□□□□□ -2.68
RPB4P20433 YPL038W-AYPL038W-A 192 nt-1.73□□□□□ -2.69
RPB4P20433 Q0017Q0017 162 nt-1.73□□□□□ -2.69
RPB4P20433 tM(CAU)Q2tM(CAU)Q2 78 nt-1.74□□□□□ -2.69
RPB4P20433 YBR182C-AYBR182C-A 195 nt-1.74□□□□□ -2.69
RPB4P20433 YOR008C-AYOR008C-A 225 nt-1.75□□□□□ -2.69
RPB4P20433 YOR381W-AYOR381W-A 168 nt-1.76□□□□□ -2.69
RPB4P20433 YPR197CYPR197C 564 nt-1.76□□□□□ -2.69
RPB4P20433 YGR146C-AYGR146C-A 162 nt-1.77□□□□□ -2.69
Retrieved 100 of 7,029 protein–RNA pairs in 12.3 ms