Protein–RNA interactions for Protein: P18888

SNF6, Transcription regulatory protein SNF6, yeastyeast

Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SNF6P18888 COX12YLR038C 252 nt0.56□□□□□ -2.32
SNF6P18888 snR190snR190 190 nt0.56□□□□□ -2.32
SNF6P18888 YLR282CYLR282C 342 nt0.55□□□□□ -2.32
SNF6P18888 YNL097C-BYNL097C-B 123 nt0.55□□□□□ -2.32
SNF6P18888 YCR038W-AYCR038W-A 126 nt0.54□□□□□ -2.32
SNF6P18888 ULI1YFR026C 510 nt0.54□□□□□ -2.32
SNF6P18888 YGL123C-AYGL123C-A 231 nt0.54□□□□□ -2.32
SNF6P18888 UTP10YJL109C 5310 nt0.53□□□□□ -2.32
SNF6P18888 UTP20YBL004W 7482 nt0.53□□□□□ -2.32
SNF6P18888 YER053C-AYER053C-A 114 nt0.53□□□□□ -2.32
SNF6P18888 YMR158W-BYMR158W-B 321 nt0.53□□□□□ -2.32
SNF6P18888 YPR160W-AYPR160W-A 81 nt0.53□□□□□ -2.32
SNF6P18888 CHS6YJL099W 2241 nt0.52□□□□□ -2.33
SNF6P18888 YML002WYML002W 2214 nt0.52□□□□□ -2.33
SNF6P18888 YMR160WYMR160W 2451 nt0.52□□□□□ -2.33
SNF6P18888 tN(GUU)QtN(GUU)Q 71 nt0.52□□□□□ -2.33
SNF6P18888 APQ12YIL040W 417 nt0.52□□□□□ -2.33
SNF6P18888 COX5BYIL111W 456 nt0.51□□□□□ -2.33
SNF6P18888 BLI1YKL061W 342 nt0.51□□□□□ -2.33
SNF6P18888 PRP5YBR237W 2550 nt0.51□□□□□ -2.33
SNF6P18888 SEC8YPR055W 3198 nt0.5□□□□□ -2.33
SNF6P18888 YSP1YHR155W 3687 nt0.5□□□□□ -2.33
SNF6P18888 FYV10YIL097W 1551 nt0.49□□□□□ -2.33
SNF6P18888 YIL002W-AYIL002W-A 210 nt0.49□□□□□ -2.33
SNF6P18888 YEL014CYEL014C 306 nt0.48□□□□□ -2.33
SNF6P18888 YLR041WYLR041W 321 nt0.48□□□□□ -2.33
SNF6P18888 YLR399W-AYLR399W-A 105 nt0.48□□□□□ -2.33
SNF6P18888 HAL9YOL089C 3093 nt0.47□□□□□ -2.33
SNF6P18888 LTE1YAL024C 4308 nt0.47□□□□□ -2.33
SNF6P18888 OST4YDL232W 111 nt0.47□□□□□ -2.33
SNF6P18888 YJL182CYJL182C 318 nt0.45□□□□□ -2.34
SNF6P18888 JLP2YMR132C 627 nt0.45□□□□□ -2.34
SNF6P18888 PRP42YDR235W 1635 nt0.45□□□□□ -2.34
SNF6P18888 YOR192C-BYOR192C-B 5313 nt0.45□□□□□ -2.34
SNF6P18888 PRP39YML046W 1890 nt0.44□□□□□ -2.34
SNF6P18888 SPG3YDR504C 384 nt0.43□□□□□ -2.34
SNF6P18888 YJL127W-AYJL127W-A 117 nt0.43□□□□□ -2.34
SNF6P18888 YKL100W-AYKL100W-A 90 nt0.43□□□□□ -2.34
SNF6P18888 YHR131W-AYHR131W-A 246 nt0.42□□□□□ -2.34
SNF6P18888 snR46snR46 197 nt0.42□□□□□ -2.34
SNF6P18888 TRS65YGR166W 1683 nt0.41□□□□□ -2.34
SNF6P18888 SNU13YEL026W 381 nt0.41□□□□□ -2.34
SNF6P18888 UTP8YGR128C 2142 nt0.41□□□□□ -2.34
SNF6P18888 IQG1YPL242C 4488 nt0.4□□□□□ -2.35
SNF6P18888 TAH1YCR060W 336 nt0.4□□□□□ -2.35
SNF6P18888 snR52snR52 92 nt0.4□□□□□ -2.35
SNF6P18888 YDR544CYDR544C 429 nt0.39□□□□□ -2.35
SNF6P18888 ULP2YIL031W 3105 nt0.39□□□□□ -2.35
SNF6P18888 tF(GAA)BtF(GAA)B 73 nt0.38□□□□□ -2.35
SNF6P18888 tF(GAA)FtF(GAA)F 73 nt0.38□□□□□ -2.35
SNF6P18888 tF(GAA)GtF(GAA)G 73 nt0.38□□□□□ -2.35
SNF6P18888 tF(GAA)H1tF(GAA)H1 73 nt0.38□□□□□ -2.35
SNF6P18888 tF(GAA)H2tF(GAA)H2 73 nt0.38□□□□□ -2.35
SNF6P18888 YDR406W-AYDR406W-A 246 nt0.38□□□□□ -2.35
SNF6P18888 tF(GAA)MtF(GAA)M 73 nt0.38□□□□□ -2.35
SNF6P18888 tF(GAA)P1tF(GAA)P1 73 nt0.38□□□□□ -2.35
SNF6P18888 tF(GAA)P2tF(GAA)P2 73 nt0.38□□□□□ -2.35
SNF6P18888 PAU12YGR294W 363 nt0.38□□□□□ -2.35
SNF6P18888 YJL150WYJL150W 303 nt0.38□□□□□ -2.35
SNF6P18888 YBL039C-AYBL039C-A 84 nt0.38□□□□□ -2.35
SNF6P18888 FMP27YLR454W 7887 nt0.38□□□□□ -2.35
SNF6P18888 YGL182CYGL182C 324 nt0.37□□□□□ -2.35
SNF6P18888 YLR232WYLR232W 348 nt0.37□□□□□ -2.35
SNF6P18888 YMR046W-AYMR046W-A 129 nt0.37□□□□□ -2.35
SNF6P18888 PET111YMR257C 2403 nt0.37□□□□□ -2.35
SNF6P18888 NNF2YGR089W 2811 nt0.37□□□□□ -2.35
SNF6P18888 BEM3YPL115C 3387 nt0.36□□□□□ -2.35
SNF6P18888 SBH1YER087C-B 249 nt0.35□□□□□ -2.35
SNF6P18888 ORC3YLL004W 1851 nt0.35□□□□□ -2.35
SNF6P18888 tM(CAU)Q1tM(CAU)Q1 76 nt0.34□□□□□ -2.36
SNF6P18888 YBR072C-AYBR072C-A 162 nt0.34□□□□□ -2.36
SNF6P18888 YDR371C-AYDR371C-A 105 nt0.33□□□□□ -2.36
SNF6P18888 YEL073CYEL073C 324 nt0.33□□□□□ -2.36
SNF6P18888 RPS26AYGL189C 360 nt0.33□□□□□ -2.36
SNF6P18888 YLL006W-AYLL006W-A 177 nt0.33□□□□□ -2.36
SNF6P18888 YOR381W-AYOR381W-A 168 nt0.33□□□□□ -2.36
SNF6P18888 NIP1YMR309C 2439 nt0.32□□□□□ -2.36
SNF6P18888 SDH6YDR379C-A 240 nt0.32□□□□□ -2.36
SNF6P18888 YKL145W-AYKL145W-A 93 nt0.32□□□□□ -2.36
SNF6P18888 BIR1YJR089W 2865 nt0.32□□□□□ -2.36
SNF6P18888 MLP2YIL149C 5040 nt0.31□□□□□ -2.36
SNF6P18888 YLR342W-AYLR342W-A 174 nt0.31□□□□□ -2.36
SNF6P18888 BUL2YML111W 2763 nt0.31□□□□□ -2.36
SNF6P18888 COG6YNL041C 2520 nt0.3□□□□□ -2.36
SNF6P18888 YNL198CYNL198C 303 nt0.3□□□□□ -2.36
SNF6P18888 AI1Q0050 2505 nt0.29□□□□□ -2.36
SNF6P18888 QCR9YGR183C 201 nt0.29□□□□□ -2.36
SNF6P18888 YOR170WYOR170W 306 nt0.29□□□□□ -2.36
SNF6P18888 YBL053WYBL053W 375 nt0.28□□□□□ -2.36
SNF6P18888 ESP1YGR098C 4893 nt0.27□□□□□ -2.37
SNF6P18888 YOR314W-AYOR314W-A 111 nt0.27□□□□□ -2.37
SNF6P18888 YOR329W-AYOR329W-A 210 nt0.27□□□□□ -2.37
SNF6P18888 tL(UAA)QtL(UAA)Q 85 nt0.26□□□□□ -2.37
SNF6P18888 YOL014WYOL014W 375 nt0.26□□□□□ -2.37
SNF6P18888 snR39BsnR39B 96 nt0.26□□□□□ -2.37
SNF6P18888 GLG1YKR058W 1851 nt0.26□□□□□ -2.37
SNF6P18888 RCO1YMR075W 2055 nt0.25□□□□□ -2.37
SNF6P18888 YLR466C-BYLR466C-B 117 nt0.25□□□□□ -2.37
SNF6P18888 CSE1YGL238W 2883 nt0.24□□□□□ -2.37
SNF6P18888 YDR210WYDR210W 228 nt0.24□□□□□ -2.37
Retrieved 100 of 7,029 protein–RNA pairs in 27.2 ms