Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.5■□□□□ 0.87
BRAFP15056 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
BRAFP15056 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
BRAFP15056 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
BRAFP15056 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
BRAFP15056 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
BRAFP15056 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
BRAFP15056 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
BRAFP15056 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
BRAFP15056 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
BRAFP15056 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
BRAFP15056 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
BRAFP15056 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.49■□□□□ 0.87
BRAFP15056 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.49■□□□□ 0.87
BRAFP15056 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
BRAFP15056 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
BRAFP15056 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.49■□□□□ 0.87
BRAFP15056 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.49■□□□□ 0.87
BRAFP15056 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.49■□□□□ 0.87
BRAFP15056 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.49■□□□□ 0.87
BRAFP15056 AC231657.2-201ENST00000624556 255 ntBASIC20.49■□□□□ 0.87
BRAFP15056 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
BRAFP15056 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.49■□□□□ 0.87
BRAFP15056 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
BRAFP15056 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
BRAFP15056 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
BRAFP15056 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.49■□□□□ 0.87
BRAFP15056 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.49■□□□□ 0.87
BRAFP15056 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
BRAFP15056 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
BRAFP15056 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
BRAFP15056 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
BRAFP15056 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.48■□□□□ 0.87
BRAFP15056 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
BRAFP15056 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
BRAFP15056 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
BRAFP15056 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.48■□□□□ 0.87
BRAFP15056 TERF1P5-201ENST00000477545 1207 ntBASIC20.48■□□□□ 0.87
BRAFP15056 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.48■□□□□ 0.87
BRAFP15056 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.48■□□□□ 0.87
BRAFP15056 AL050303.2-201ENST00000619798 666 ntBASIC20.48■□□□□ 0.87
BRAFP15056 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.48■□□□□ 0.87
BRAFP15056 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
BRAFP15056 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.48■□□□□ 0.87
BRAFP15056 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
BRAFP15056 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
BRAFP15056 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
BRAFP15056 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
BRAFP15056 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
BRAFP15056 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
BRAFP15056 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
BRAFP15056 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
BRAFP15056 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
BRAFP15056 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
BRAFP15056 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
BRAFP15056 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.47■□□□□ 0.87
BRAFP15056 MIR663A-201ENST00000385250 93 ntBASIC20.47■□□□□ 0.87
BRAFP15056 AC007322.1-201ENST00000426983 750 ntBASIC20.47■□□□□ 0.87
BRAFP15056 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.47■□□□□ 0.87
BRAFP15056 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.47■□□□□ 0.87
BRAFP15056 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
BRAFP15056 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.47■□□□□ 0.87
BRAFP15056 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.47■□□□□ 0.87
BRAFP15056 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.47■□□□□ 0.87
BRAFP15056 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
BRAFP15056 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
BRAFP15056 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
BRAFP15056 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
BRAFP15056 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
BRAFP15056 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
BRAFP15056 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.46■□□□□ 0.87
BRAFP15056 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
BRAFP15056 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.46■□□□□ 0.87
BRAFP15056 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
BRAFP15056 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
BRAFP15056 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
BRAFP15056 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
BRAFP15056 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
BRAFP15056 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
BRAFP15056 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
BRAFP15056 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
BRAFP15056 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
BRAFP15056 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.46■□□□□ 0.87
BRAFP15056 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.46■□□□□ 0.87
BRAFP15056 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.46■□□□□ 0.87
BRAFP15056 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.46■□□□□ 0.87
BRAFP15056 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.46■□□□□ 0.87
BRAFP15056 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
BRAFP15056 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
BRAFP15056 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
BRAFP15056 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.46■□□□□ 0.87
BRAFP15056 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
BRAFP15056 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
BRAFP15056 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
BRAFP15056 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.46■□□□□ 0.87
BRAFP15056 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
BRAFP15056 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
BRAFP15056 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.45■□□□□ 0.86
BRAFP15056 RBM17P2-201ENST00000616397 1405 ntBASIC20.45■□□□□ 0.86
BRAFP15056 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms