Protein–RNA interactions for Protein: P0CW24

PNMA6A, Paraneoplastic antigen-like protein 6A, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA6AP0CW24 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
PNMA6AP0CW24 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
PNMA6AP0CW24 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC21.81■■□□□ 1.08
PNMA6AP0CW24 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PNMA6AP0CW24 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.81■■□□□ 1.08
PNMA6AP0CW24 MIR935-201ENST00000401179 91 ntBASIC21.81■■□□□ 1.08
PNMA6AP0CW24 IKBKGP1-201ENST00000612193 1073 ntBASIC21.81■■□□□ 1.08
PNMA6AP0CW24 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
PNMA6AP0CW24 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
PNMA6AP0CW24 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PNMA6AP0CW24 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PNMA6AP0CW24 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
PNMA6AP0CW24 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
PNMA6AP0CW24 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21.81■■□□□ 1.08
PNMA6AP0CW24 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
PNMA6AP0CW24 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
PNMA6AP0CW24 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PNMA6AP0CW24 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC21.8■■□□□ 1.08
PNMA6AP0CW24 CYP21A1P-202ENST00000354927 1481 ntBASIC21.8■■□□□ 1.08
PNMA6AP0CW24 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PNMA6AP0CW24 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PNMA6AP0CW24 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
PNMA6AP0CW24 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
PNMA6AP0CW24 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.8■■□□□ 1.08
PNMA6AP0CW24 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.8■■□□□ 1.08
PNMA6AP0CW24 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.8■■□□□ 1.08
PNMA6AP0CW24 AC092437.1-201ENST00000624794 1048 ntBASIC21.8■■□□□ 1.08
PNMA6AP0CW24 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PNMA6AP0CW24 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PNMA6AP0CW24 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.8■■□□□ 1.08
PNMA6AP0CW24 AC068338.2-201ENST00000563278 1430 ntBASIC21.8■■□□□ 1.08
PNMA6AP0CW24 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PNMA6AP0CW24 DPP3P2-201ENST00000416030 1696 ntBASIC21.79■■□□□ 1.08
PNMA6AP0CW24 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PNMA6AP0CW24 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.79■■□□□ 1.08
PNMA6AP0CW24 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
PNMA6AP0CW24 AC007322.4-201ENST00000509611 723 ntBASIC21.79■■□□□ 1.08
PNMA6AP0CW24 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.79■■□□□ 1.08
PNMA6AP0CW24 FAM21FP-204ENST00000608637 956 ntBASIC21.79■■□□□ 1.08
PNMA6AP0CW24 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PNMA6AP0CW24 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PNMA6AP0CW24 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC21.79■■□□□ 1.08
PNMA6AP0CW24 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
PNMA6AP0CW24 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PNMA6AP0CW24 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
PNMA6AP0CW24 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.78■■□□□ 1.08
PNMA6AP0CW24 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.78■■□□□ 1.08
PNMA6AP0CW24 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PNMA6AP0CW24 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
PNMA6AP0CW24 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
PNMA6AP0CW24 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
PNMA6AP0CW24 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PNMA6AP0CW24 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.78■■□□□ 1.08
PNMA6AP0CW24 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.78■■□□□ 1.08
PNMA6AP0CW24 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.78■■□□□ 1.08
PNMA6AP0CW24 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.78■■□□□ 1.08
PNMA6AP0CW24 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.78■■□□□ 1.08
PNMA6AP0CW24 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.78■■□□□ 1.08
PNMA6AP0CW24 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PNMA6AP0CW24 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC21.78■■□□□ 1.08
PNMA6AP0CW24 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PNMA6AP0CW24 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PNMA6AP0CW24 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PNMA6AP0CW24 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
PNMA6AP0CW24 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.77■■□□□ 1.08
PNMA6AP0CW24 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PNMA6AP0CW24 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PNMA6AP0CW24 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
PNMA6AP0CW24 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PNMA6AP0CW24 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
PNMA6AP0CW24 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
PNMA6AP0CW24 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
PNMA6AP0CW24 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PNMA6AP0CW24 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
PNMA6AP0CW24 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PNMA6AP0CW24 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PNMA6AP0CW24 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.77■■□□□ 1.08
PNMA6AP0CW24 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.77■■□□□ 1.08
PNMA6AP0CW24 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.77■■□□□ 1.08
PNMA6AP0CW24 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.77■■□□□ 1.08
PNMA6AP0CW24 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.77■■□□□ 1.08
PNMA6AP0CW24 BID-214ENST00000617586 542 ntTSL 5 BASIC21.77■■□□□ 1.08
PNMA6AP0CW24 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
PNMA6AP0CW24 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.77■■□□□ 1.08
PNMA6AP0CW24 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
PNMA6AP0CW24 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
PNMA6AP0CW24 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PNMA6AP0CW24 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
PNMA6AP0CW24 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PNMA6AP0CW24 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.76■■□□□ 1.07
PNMA6AP0CW24 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PNMA6AP0CW24 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
PNMA6AP0CW24 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PNMA6AP0CW24 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.76■■□□□ 1.07
PNMA6AP0CW24 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PNMA6AP0CW24 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PNMA6AP0CW24 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PNMA6AP0CW24 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PNMA6AP0CW24 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PNMA6AP0CW24 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms