Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 TFP1-202ENST00000475455 1573 ntBASIC23.5■■□□□ 1.35
COL2A1P02458 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
COL2A1P02458 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
COL2A1P02458 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
COL2A1P02458 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC23.49■■□□□ 1.35
COL2A1P02458 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC23.49■■□□□ 1.35
COL2A1P02458 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC23.49■■□□□ 1.35
COL2A1P02458 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
COL2A1P02458 AC079598.2-202ENST00000546624 1451 ntBASIC23.49■■□□□ 1.35
COL2A1P02458 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
COL2A1P02458 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC23.49■■□□□ 1.35
COL2A1P02458 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
COL2A1P02458 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
COL2A1P02458 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
COL2A1P02458 AP006587.1-201ENST00000534129 1502 ntBASIC23.49■■□□□ 1.35
COL2A1P02458 MMP23A-201ENST00000234610 1017 ntBASIC23.49■■□□□ 1.35
COL2A1P02458 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC23.49■■□□□ 1.35
COL2A1P02458 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC23.49■■□□□ 1.35
COL2A1P02458 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC23.49■■□□□ 1.35
COL2A1P02458 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC23.49■■□□□ 1.35
COL2A1P02458 AC026310.3-201ENST00000625186 2373 ntBASIC23.49■■□□□ 1.35
COL2A1P02458 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC23.48■■□□□ 1.35
COL2A1P02458 AC092720.2-201ENST00000602388 1665 ntBASIC23.48■■□□□ 1.35
COL2A1P02458 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC23.48■■□□□ 1.35
COL2A1P02458 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
COL2A1P02458 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC23.48■■□□□ 1.35
COL2A1P02458 KRT16P6-202ENST00000425692 1426 ntBASIC23.48■■□□□ 1.35
COL2A1P02458 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC23.48■■□□□ 1.35
COL2A1P02458 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
COL2A1P02458 UNC93B2-201ENST00000285383 730 ntBASIC23.48■■□□□ 1.35
COL2A1P02458 RCN1P1-201ENST00000400413 996 ntBASIC23.48■■□□□ 1.35
COL2A1P02458 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC23.48■■□□□ 1.35
COL2A1P02458 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC23.48■■□□□ 1.35
COL2A1P02458 KRT18P16-201ENST00000510337 1294 ntBASIC23.48■■□□□ 1.35
COL2A1P02458 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC23.48■■□□□ 1.35
COL2A1P02458 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
COL2A1P02458 GLDC-219ENST00000640208 420 ntTSL 2 BASIC23.48■■□□□ 1.35
COL2A1P02458 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC23.48■■□□□ 1.35
COL2A1P02458 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
COL2A1P02458 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
COL2A1P02458 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
COL2A1P02458 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
COL2A1P02458 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC23.47■■□□□ 1.35
COL2A1P02458 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
COL2A1P02458 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC23.47■■□□□ 1.35
COL2A1P02458 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC23.47■■□□□ 1.35
COL2A1P02458 AL445675.2-201ENST00000620291 557 ntBASIC23.47■■□□□ 1.35
COL2A1P02458 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
COL2A1P02458 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC23.47■■□□□ 1.35
COL2A1P02458 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
COL2A1P02458 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
COL2A1P02458 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
COL2A1P02458 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC23.46■■□□□ 1.35
COL2A1P02458 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
COL2A1P02458 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
COL2A1P02458 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC23.46■■□□□ 1.35
COL2A1P02458 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC23.46■■□□□ 1.35
COL2A1P02458 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
COL2A1P02458 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
COL2A1P02458 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC23.46■■□□□ 1.35
COL2A1P02458 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
COL2A1P02458 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC23.46■■□□□ 1.35
COL2A1P02458 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC23.46■■□□□ 1.35
COL2A1P02458 AC145285.6-201ENST00000604632 637 ntBASIC23.46■■□□□ 1.35
COL2A1P02458 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC23.46■■□□□ 1.35
COL2A1P02458 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
COL2A1P02458 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC23.45■■□□□ 1.35
COL2A1P02458 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
COL2A1P02458 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC23.45■■□□□ 1.34
COL2A1P02458 AC018553.1-201ENST00000616682 1458 ntBASIC23.45■■□□□ 1.34
COL2A1P02458 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
COL2A1P02458 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
COL2A1P02458 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC23.45■■□□□ 1.34
COL2A1P02458 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC23.44■■□□□ 1.34
COL2A1P02458 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC23.44■■□□□ 1.34
COL2A1P02458 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
COL2A1P02458 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
COL2A1P02458 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
COL2A1P02458 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC23.44■■□□□ 1.34
COL2A1P02458 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC23.44■■□□□ 1.34
COL2A1P02458 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
COL2A1P02458 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC23.44■■□□□ 1.34
COL2A1P02458 AP000525.1-201ENST00000608286 694 ntBASIC23.44■■□□□ 1.34
COL2A1P02458 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
COL2A1P02458 PHGDH-210ENST00000641115 1638 ntBASIC23.44■■□□□ 1.34
COL2A1P02458 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.44■■□□□ 1.34
COL2A1P02458 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC23.44■■□□□ 1.34
COL2A1P02458 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC23.44■■□□□ 1.34
COL2A1P02458 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
COL2A1P02458 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC23.44■■□□□ 1.34
COL2A1P02458 WWC2-AS2-201ENST00000578387 2183 ntBASIC23.44■■□□□ 1.34
COL2A1P02458 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
COL2A1P02458 KRT8P9-201ENST00000558927 1449 ntBASIC23.43■■□□□ 1.34
COL2A1P02458 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
COL2A1P02458 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
COL2A1P02458 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC23.43■■□□□ 1.34
COL2A1P02458 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC23.43■■□□□ 1.34
COL2A1P02458 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC23.43■■□□□ 1.34
COL2A1P02458 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC23.43■■□□□ 1.34
COL2A1P02458 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC23.43■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms