Protein–RNA interactions for Protein: P02309

HHF1, Histone H4, yeastyeast

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HHF1P02309 tC(GCA)P2tC(GCA)P2 72 nt0.84□□□□□ -2.27
HHF1P02309 EMT1tM(CAU)D 73 nt0.84□□□□□ -2.27
HHF1P02309 EMT5tM(CAU)J1 73 nt0.84□□□□□ -2.27
HHF1P02309 EMT3tM(CAU)J2 73 nt0.84□□□□□ -2.27
HHF1P02309 EMT4tM(CAU)M 73 nt0.84□□□□□ -2.27
HHF1P02309 EMT2tM(CAU)O2 73 nt0.84□□□□□ -2.27
HHF1P02309 YBL039C-AYBL039C-A 84 nt0.84□□□□□ -2.27
HHF1P02309 YPR160W-AYPR160W-A 81 nt0.84□□□□□ -2.27
HHF1P02309 YKL100W-AYKL100W-A 90 nt0.83□□□□□ -2.28
HHF1P02309 TAH1YCR060W 336 nt0.82□□□□□ -2.28
HHF1P02309 YDL007C-AYDL007C-A 258 nt0.82□□□□□ -2.28
HHF1P02309 YGL182CYGL182C 324 nt0.82□□□□□ -2.28
HHF1P02309 CHS6YJL099W 2241 nt0.82□□□□□ -2.28
HHF1P02309 SEC8YPR055W 3198 nt0.81□□□□□ -2.28
HHF1P02309 YPR117WYPR117W 7470 nt0.81□□□□□ -2.28
HHF1P02309 MSH3YCR092C 3057 nt0.79□□□□□ -2.28
HHF1P02309 UTP8YGR128C 2142 nt0.79□□□□□ -2.28
HHF1P02309 YDR544CYDR544C 429 nt0.78□□□□□ -2.28
HHF1P02309 BEM2YER155C 6504 nt0.78□□□□□ -2.28
HHF1P02309 YGR130CYGR130C 2451 nt0.77□□□□□ -2.29
HHF1P02309 tL(UAA)QtL(UAA)Q 85 nt0.77□□□□□ -2.29
HHF1P02309 YHR131W-AYHR131W-A 246 nt0.77□□□□□ -2.29
HHF1P02309 YLR399W-AYLR399W-A 105 nt0.77□□□□□ -2.29
HHF1P02309 snR48snR48 113 nt0.76□□□□□ -2.29
HHF1P02309 OST4YDL232W 111 nt0.75□□□□□ -2.29
HHF1P02309 tH(GUG)E1tH(GUG)E1 72 nt0.75□□□□□ -2.29
HHF1P02309 tH(GUG)E2tH(GUG)E2 72 nt0.75□□□□□ -2.29
HHF1P02309 tH(GUG)G1tH(GUG)G1 72 nt0.75□□□□□ -2.29
HHF1P02309 tH(GUG)G2tH(GUG)G2 72 nt0.75□□□□□ -2.29
HHF1P02309 tH(GUG)HtH(GUG)H 72 nt0.75□□□□□ -2.29
HHF1P02309 tH(GUG)KtH(GUG)K 72 nt0.75□□□□□ -2.29
HHF1P02309 tH(GUG)MtH(GUG)M 72 nt0.75□□□□□ -2.29
HHF1P02309 YOR102WYOR102W 351 nt0.75□□□□□ -2.29
HHF1P02309 YOR170WYOR170W 306 nt0.75□□□□□ -2.29
HHF1P02309 SNU13YEL026W 381 nt0.74□□□□□ -2.29
HHF1P02309 YHL015W-AYHL015W-A 84 nt0.74□□□□□ -2.29
HHF1P02309 YLR232WYLR232W 348 nt0.74□□□□□ -2.29
HHF1P02309 YOR329W-AYOR329W-A 210 nt0.73□□□□□ -2.29
HHF1P02309 snR39BsnR39B 96 nt0.73□□□□□ -2.29
HHF1P02309 CAT8YMR280C 4302 nt0.72□□□□□ -2.29
HHF1P02309 YPP1YGR198W 2454 nt0.71□□□□□ -2.3
HHF1P02309 LTE1YAL024C 4308 nt0.71□□□□□ -2.3
HHF1P02309 YOR192C-BYOR192C-B 5313 nt0.71□□□□□ -2.3
HHF1P02309 SEC1YDR164C 2175 nt0.69□□□□□ -2.3
HHF1P02309 COG6YNL041C 2520 nt0.68□□□□□ -2.3
HHF1P02309 YOR314W-AYOR314W-A 111 nt0.67□□□□□ -2.3
HHF1P02309 SDH6YDR379C-A 240 nt0.66□□□□□ -2.3
HHF1P02309 YGR164WYGR164W 336 nt0.66□□□□□ -2.3
HHF1P02309 QCR9YGR183C 201 nt0.66□□□□□ -2.3
HHF1P02309 YJL127W-AYJL127W-A 117 nt0.66□□□□□ -2.3
HHF1P02309 UBP3YER151C 2739 nt0.65□□□□□ -2.31
HHF1P02309 ATP8Q0080 147 nt0.65□□□□□ -2.31
HHF1P02309 YSP1YHR155W 3687 nt0.65□□□□□ -2.31
HHF1P02309 BUL2YML111W 2763 nt0.64□□□□□ -2.31
HHF1P02309 YDR210WYDR210W 228 nt0.63□□□□□ -2.31
HHF1P02309 Q0092Q0092 141 nt0.63□□□□□ -2.31
HHF1P02309 YBR072C-AYBR072C-A 162 nt0.63□□□□□ -2.31
HHF1P02309 tV(UAC)BtV(UAC)B 74 nt0.62□□□□□ -2.31
HHF1P02309 tV(UAC)DtV(UAC)D 74 nt0.62□□□□□ -2.31
HHF1P02309 YNL170WYNL170W 396 nt0.62□□□□□ -2.31
HHF1P02309 YOL019W-AYOL019W-A 153 nt0.62□□□□□ -2.31
HHF1P02309 NNF2YGR089W 2811 nt0.61□□□□□ -2.31
HHF1P02309 YNL067W-BYNL067W-B 141 nt0.61□□□□□ -2.31
HHF1P02309 BEM3YPL115C 3387 nt0.61□□□□□ -2.31
HHF1P02309 tM(CAU)Q2tM(CAU)Q2 78 nt0.6□□□□□ -2.31
HHF1P02309 YLL006W-AYLL006W-A 177 nt0.6□□□□□ -2.31
HHF1P02309 YPL060C-AYPL060C-A 3315 nt0.58□□□□□ -2.32
HHF1P02309 YNL054W-BYNL054W-B 5250 nt0.58□□□□□ -2.32
HHF1P02309 PAU12YGR294W 363 nt0.58□□□□□ -2.32
HHF1P02309 YIL071W-AYIL071W-A 477 nt0.58□□□□□ -2.32
HHF1P02309 PAU24YBR301W 363 nt0.58□□□□□ -2.32
HHF1P02309 NUP192YJL039C 5052 nt0.58□□□□□ -2.32
HHF1P02309 NIP1YMR309C 2439 nt0.57□□□□□ -2.32
HHF1P02309 ULP2YIL031W 3105 nt0.57□□□□□ -2.32
HHF1P02309 RPS26AYGL189C 360 nt0.57□□□□□ -2.32
HHF1P02309 SIP4YJL089W 2490 nt0.57□□□□□ -2.32
HHF1P02309 YDR371C-AYDR371C-A 105 nt0.56□□□□□ -2.32
HHF1P02309 YCL001W-BYCL001W-B 255 nt0.56□□□□□ -2.32
HHF1P02309 GLG1YKR058W 1851 nt0.56□□□□□ -2.32
HHF1P02309 ORC3YLL004W 1851 nt0.55□□□□□ -2.32
HHF1P02309 PET111YMR257C 2403 nt0.54□□□□□ -2.32
HHF1P02309 UTP10YJL109C 5310 nt0.53□□□□□ -2.32
HHF1P02309 YMR272W-AYMR272W-A 114 nt0.52□□□□□ -2.33
HHF1P02309 YGR146C-AYGR146C-A 162 nt0.51□□□□□ -2.33
HHF1P02309 YPR159C-AYPR159C-A 102 nt0.51□□□□□ -2.33
HHF1P02309 SOM1YEL059C-A 225 nt0.48□□□□□ -2.33
HHF1P02309 SBH1YER087C-B 249 nt0.48□□□□□ -2.33
HHF1P02309 RPM2YML091C 3609 nt0.47□□□□□ -2.33
HHF1P02309 RCO1YMR075W 2055 nt0.47□□□□□ -2.33
HHF1P02309 YBL100W-BYBL100W-B 5313 nt0.46□□□□□ -2.34
HHF1P02309 CSE1YGL238W 2883 nt0.46□□□□□ -2.34
HHF1P02309 YCR095W-AYCR095W-A 159 nt0.45□□□□□ -2.34
HHF1P02309 BIR1YJR089W 2865 nt0.44□□□□□ -2.34
HHF1P02309 HUG1YML058W-A 207 nt0.43□□□□□ -2.34
HHF1P02309 YNL205CYNL205C 423 nt0.43□□□□□ -2.34
HHF1P02309 EST1YLR233C 2100 nt0.41□□□□□ -2.34
HHF1P02309 YBR099CYBR099C 384 nt0.41□□□□□ -2.34
HHF1P02309 IQG1YPL242C 4488 nt0.4□□□□□ -2.34
HHF1P02309 PMP2YEL017C-A 132 nt0.39□□□□□ -2.35
HHF1P02309 ESP1YGR098C 4893 nt0.38□□□□□ -2.35
Retrieved 100 of 7,029 protein–RNA pairs in 58.1 ms