Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 HLA-G-202ENST00000376815 851 ntBASIC17.73■□□□□ 0.43
CNOT4O95628 HLA-G-203ENST00000376818 1127 ntBASIC17.73■□□□□ 0.43
CNOT4O95628 KRT17P3-201ENST00000420566 1262 ntBASIC17.73■□□□□ 0.43
CNOT4O95628 AL596275.1-201ENST00000423464 877 ntBASIC17.73■□□□□ 0.43
CNOT4O95628 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.73■□□□□ 0.43
CNOT4O95628 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CNOT4O95628 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.73■□□□□ 0.43
CNOT4O95628 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.73■□□□□ 0.43
CNOT4O95628 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CNOT4O95628 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.73■□□□□ 0.43
CNOT4O95628 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CNOT4O95628 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.73■□□□□ 0.43
CNOT4O95628 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CNOT4O95628 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.73■□□□□ 0.43
CNOT4O95628 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CNOT4O95628 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.72■□□□□ 0.43
CNOT4O95628 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CNOT4O95628 AL121603.2-201ENST00000557373 2117 ntBASIC17.72■□□□□ 0.43
CNOT4O95628 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.72■□□□□ 0.43
CNOT4O95628 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.72■□□□□ 0.43
CNOT4O95628 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CNOT4O95628 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CNOT4O95628 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CNOT4O95628 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CNOT4O95628 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CNOT4O95628 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CNOT4O95628 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.72■□□□□ 0.43
CNOT4O95628 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CNOT4O95628 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CNOT4O95628 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.72■□□□□ 0.43
CNOT4O95628 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.72■□□□□ 0.43
CNOT4O95628 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CNOT4O95628 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.72■□□□□ 0.43
CNOT4O95628 SOX15-203ENST00000570788 1093 ntBASIC17.72■□□□□ 0.43
CNOT4O95628 AC008403.3-201ENST00000598924 454 ntBASIC17.72■□□□□ 0.43
CNOT4O95628 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.72■□□□□ 0.43
CNOT4O95628 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CNOT4O95628 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CNOT4O95628 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CNOT4O95628 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CNOT4O95628 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
CNOT4O95628 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CNOT4O95628 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.72■□□□□ 0.43
CNOT4O95628 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CNOT4O95628 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CNOT4O95628 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CNOT4O95628 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CNOT4O95628 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CNOT4O95628 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CNOT4O95628 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
CNOT4O95628 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC17.71■□□□□ 0.43
CNOT4O95628 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CNOT4O95628 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CNOT4O95628 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
CNOT4O95628 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CNOT4O95628 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CNOT4O95628 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CNOT4O95628 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CNOT4O95628 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.71■□□□□ 0.43
CNOT4O95628 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CNOT4O95628 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CNOT4O95628 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CNOT4O95628 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.71■□□□□ 0.43
CNOT4O95628 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CNOT4O95628 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.71■□□□□ 0.43
CNOT4O95628 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CNOT4O95628 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CNOT4O95628 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CNOT4O95628 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.71■□□□□ 0.43
CNOT4O95628 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.71■□□□□ 0.43
CNOT4O95628 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC17.71■□□□□ 0.42
CNOT4O95628 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.71■□□□□ 0.42
CNOT4O95628 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
CNOT4O95628 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
CNOT4O95628 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
CNOT4O95628 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CNOT4O95628 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CNOT4O95628 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CNOT4O95628 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
CNOT4O95628 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
CNOT4O95628 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.7■□□□□ 0.42
CNOT4O95628 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CNOT4O95628 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CNOT4O95628 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CNOT4O95628 POM121L13P-201ENST00000422362 380 ntBASIC17.7■□□□□ 0.42
CNOT4O95628 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.7■□□□□ 0.42
CNOT4O95628 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.7■□□□□ 0.42
CNOT4O95628 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.7■□□□□ 0.42
CNOT4O95628 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CNOT4O95628 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.7■□□□□ 0.42
CNOT4O95628 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.7■□□□□ 0.42
CNOT4O95628 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC17.7■□□□□ 0.42
CNOT4O95628 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CNOT4O95628 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CNOT4O95628 KRT8P20-201ENST00000423953 1409 ntBASIC17.7■□□□□ 0.42
CNOT4O95628 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.7■□□□□ 0.42
CNOT4O95628 AC092720.2-201ENST00000602388 1665 ntBASIC17.7■□□□□ 0.42
CNOT4O95628 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CNOT4O95628 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CNOT4O95628 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms