Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.14■□□□□ 0.65
LCMT2O60294 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.14■□□□□ 0.65
LCMT2O60294 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
LCMT2O60294 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LCMT2O60294 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
LCMT2O60294 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LCMT2O60294 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LCMT2O60294 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.13■□□□□ 0.65
LCMT2O60294 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LCMT2O60294 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.13■□□□□ 0.65
LCMT2O60294 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
LCMT2O60294 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
LCMT2O60294 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LCMT2O60294 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LCMT2O60294 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.13■□□□□ 0.65
LCMT2O60294 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.13■□□□□ 0.65
LCMT2O60294 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.13■□□□□ 0.65
LCMT2O60294 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.13■□□□□ 0.65
LCMT2O60294 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LCMT2O60294 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LCMT2O60294 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
LCMT2O60294 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LCMT2O60294 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
LCMT2O60294 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
LCMT2O60294 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.13■□□□□ 0.65
LCMT2O60294 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LCMT2O60294 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LCMT2O60294 AL691432.2-201ENST00000607222 2038 ntBASIC19.13■□□□□ 0.65
LCMT2O60294 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LCMT2O60294 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LCMT2O60294 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LCMT2O60294 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.12■□□□□ 0.65
LCMT2O60294 SLC25A24-204ENST00000569674 2357 ntBASIC19.12■□□□□ 0.65
LCMT2O60294 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
LCMT2O60294 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
LCMT2O60294 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LCMT2O60294 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
LCMT2O60294 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
LCMT2O60294 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LCMT2O60294 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LCMT2O60294 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
LCMT2O60294 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LCMT2O60294 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.12■□□□□ 0.65
LCMT2O60294 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.12■□□□□ 0.65
LCMT2O60294 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LCMT2O60294 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
LCMT2O60294 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.12■□□□□ 0.65
LCMT2O60294 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LCMT2O60294 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LCMT2O60294 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LCMT2O60294 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.12■□□□□ 0.65
LCMT2O60294 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LCMT2O60294 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LCMT2O60294 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.12■□□□□ 0.65
LCMT2O60294 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.12■□□□□ 0.65
LCMT2O60294 AL390719.1-204ENST00000412397 1219 ntBASIC19.12■□□□□ 0.65
LCMT2O60294 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.12■□□□□ 0.65
LCMT2O60294 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LCMT2O60294 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.12■□□□□ 0.65
LCMT2O60294 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.12■□□□□ 0.65
LCMT2O60294 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LCMT2O60294 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
LCMT2O60294 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LCMT2O60294 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LCMT2O60294 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.12■□□□□ 0.65
LCMT2O60294 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
LCMT2O60294 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LCMT2O60294 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
LCMT2O60294 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LCMT2O60294 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LCMT2O60294 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LCMT2O60294 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LCMT2O60294 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.11■□□□□ 0.65
LCMT2O60294 UNC93B5-201ENST00000530315 699 ntBASIC19.11■□□□□ 0.65
LCMT2O60294 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.11■□□□□ 0.65
LCMT2O60294 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.11■□□□□ 0.65
LCMT2O60294 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.11■□□□□ 0.65
LCMT2O60294 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LCMT2O60294 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LCMT2O60294 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.11■□□□□ 0.65
LCMT2O60294 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.11■□□□□ 0.65
LCMT2O60294 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
LCMT2O60294 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LCMT2O60294 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LCMT2O60294 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LCMT2O60294 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
LCMT2O60294 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LCMT2O60294 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
LCMT2O60294 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LCMT2O60294 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
LCMT2O60294 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LCMT2O60294 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LCMT2O60294 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LCMT2O60294 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.1■□□□□ 0.65
LCMT2O60294 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
LCMT2O60294 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.1■□□□□ 0.65
LCMT2O60294 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.1■□□□□ 0.65
LCMT2O60294 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.1■□□□□ 0.65
LCMT2O60294 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
LCMT2O60294 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms