Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCDH7O60245 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDH7O60245 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDH7O60245 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
PCDH7O60245 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCDH7O60245 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDH7O60245 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDH7O60245 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.09■□□□□ 0.65
PCDH7O60245 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDH7O60245 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDH7O60245 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PCDH7O60245 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.08■□□□□ 0.65
PCDH7O60245 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDH7O60245 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
PCDH7O60245 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDH7O60245 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
PCDH7O60245 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.65
PCDH7O60245 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
PCDH7O60245 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.08■□□□□ 0.65
PCDH7O60245 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDH7O60245 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.08■□□□□ 0.64
PCDH7O60245 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PCDH7O60245 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.08■□□□□ 0.64
PCDH7O60245 KRT17P1-201ENST00000399211 1546 ntBASIC19.08■□□□□ 0.64
PCDH7O60245 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDH7O60245 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.08■□□□□ 0.64
PCDH7O60245 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
PCDH7O60245 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PCDH7O60245 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDH7O60245 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDH7O60245 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDH7O60245 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
PCDH7O60245 KRT8P17-201ENST00000453110 1448 ntBASIC19.08■□□□□ 0.64
PCDH7O60245 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH7O60245 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.07■□□□□ 0.64
PCDH7O60245 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.07■□□□□ 0.64
PCDH7O60245 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH7O60245 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.07■□□□□ 0.64
PCDH7O60245 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH7O60245 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH7O60245 CDCA4P2-201ENST00000441182 718 ntBASIC19.07■□□□□ 0.64
PCDH7O60245 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.07■□□□□ 0.64
PCDH7O60245 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.07■□□□□ 0.64
PCDH7O60245 AL031963.3-201ENST00000606441 850 ntBASIC19.07■□□□□ 0.64
PCDH7O60245 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH7O60245 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDH7O60245 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH7O60245 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH7O60245 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH7O60245 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH7O60245 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
PCDH7O60245 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.07■□□□□ 0.64
PCDH7O60245 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH7O60245 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDH7O60245 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH7O60245 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDH7O60245 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.06■□□□□ 0.64
PCDH7O60245 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
PCDH7O60245 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDH7O60245 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDH7O60245 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
PCDH7O60245 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
PCDH7O60245 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDH7O60245 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.06■□□□□ 0.64
PCDH7O60245 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.06■□□□□ 0.64
PCDH7O60245 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.06■□□□□ 0.64
PCDH7O60245 AC133552.2-202ENST00000575694 574 ntBASIC19.06■□□□□ 0.64
PCDH7O60245 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.06■□□□□ 0.64
PCDH7O60245 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCDH7O60245 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.06■□□□□ 0.64
PCDH7O60245 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDH7O60245 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDH7O60245 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDH7O60245 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH7O60245 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.05■□□□□ 0.64
PCDH7O60245 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH7O60245 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH7O60245 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH7O60245 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH7O60245 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH7O60245 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH7O60245 TMEM179-206ENST00000616017 1645 ntBASIC19.05■□□□□ 0.64
PCDH7O60245 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH7O60245 MIR663A-201ENST00000385250 93 ntBASIC19.05■□□□□ 0.64
PCDH7O60245 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
PCDH7O60245 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH7O60245 AC026185.1-201ENST00000445748 174 ntBASIC19.05■□□□□ 0.64
PCDH7O60245 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.05■□□□□ 0.64
PCDH7O60245 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDH7O60245 C2orf69P4-201ENST00000565394 541 ntBASIC19.05■□□□□ 0.64
PCDH7O60245 AL050303.2-201ENST00000619798 666 ntBASIC19.05■□□□□ 0.64
PCDH7O60245 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH7O60245 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH7O60245 KRT8P20-201ENST00000423953 1409 ntBASIC19.05■□□□□ 0.64
PCDH7O60245 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH7O60245 AC007952.6-201ENST00000573168 2673 ntBASIC19.05■□□□□ 0.64
PCDH7O60245 AC003957.1-201ENST00000625108 2673 ntBASIC19.05■□□□□ 0.64
PCDH7O60245 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDH7O60245 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDH7O60245 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms