Protein–RNA interactions for Protein: O13559

YRF1-4, Y' element ATP-dependent helicase protein 1 copy 4, yeastyeast

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YRF1-4O13559 YLR282CYLR282C 342 nt0.64□□□□□ -2.31
YRF1-4O13559 YJL113WYJL113W 4647 nt0.64□□□□□ -2.31
YRF1-4O13559 OST4YDL232W 111 nt0.63□□□□□ -2.31
YRF1-4O13559 YJL127W-AYJL127W-A 117 nt0.63□□□□□ -2.31
YRF1-4O13559 YLL019W-AYLL019W-A 93 nt0.63□□□□□ -2.31
YRF1-4O13559 RAD61YDR014W 1944 nt0.63□□□□□ -2.31
YRF1-4O13559 YKL100W-AYKL100W-A 90 nt0.62□□□□□ -2.31
YRF1-4O13559 YMR172C-AYMR172C-A 384 nt0.62□□□□□ -2.31
YRF1-4O13559 YOR072W-BYOR072W-B 162 nt0.62□□□□□ -2.31
YRF1-4O13559 MLP1YKR095W 5628 nt0.61□□□□□ -2.31
YRF1-4O13559 PRP42YDR235W 1635 nt0.61□□□□□ -2.31
YRF1-4O13559 MLP2YIL149C 5040 nt0.61□□□□□ -2.31
YRF1-4O13559 YOR015WYOR015W 360 nt0.6□□□□□ -2.31
YRF1-4O13559 COY1YKL179C 2040 nt0.6□□□□□ -2.31
YRF1-4O13559 YGL123C-AYGL123C-A 231 nt0.59□□□□□ -2.31
YRF1-4O13559 MYO1YHR023W 5787 nt0.59□□□□□ -2.32
YRF1-4O13559 YCR022CYCR022C 345 nt0.58□□□□□ -2.32
YRF1-4O13559 YIL134C-AYIL134C-A 204 nt0.58□□□□□ -2.32
YRF1-4O13559 YPR092WYPR092W 306 nt0.58□□□□□ -2.32
YRF1-4O13559 YNL054W-BYNL054W-B 5250 nt0.58□□□□□ -2.32
YRF1-4O13559 PRP39YML046W 1890 nt0.57□□□□□ -2.32
YRF1-4O13559 ULI1YFR026C 510 nt0.57□□□□□ -2.32
YRF1-4O13559 YGR069WYGR069W 336 nt0.57□□□□□ -2.32
YRF1-4O13559 PET111YMR257C 2403 nt0.56□□□□□ -2.32
YRF1-4O13559 BLI1YKL061W 342 nt0.56□□□□□ -2.32
YRF1-4O13559 YLR041WYLR041W 321 nt0.56□□□□□ -2.32
YRF1-4O13559 YGL052WYGL052W 306 nt0.55□□□□□ -2.32
YRF1-4O13559 YNL277W-AYNL277W-A 189 nt0.55□□□□□ -2.32
YRF1-4O13559 tN(GUU)QtN(GUU)Q 71 nt0.54□□□□□ -2.32
YRF1-4O13559 snR65snR65 100 nt0.53□□□□□ -2.32
YRF1-4O13559 YOR345CYOR345C 351 nt0.53□□□□□ -2.32
YRF1-4O13559 YOR161W-AYOR161W-A 81 nt0.52□□□□□ -2.33
YRF1-4O13559 COX12YLR038C 252 nt0.5□□□□□ -2.33
YRF1-4O13559 UTP10YJL109C 5310 nt0.5□□□□□ -2.33
YRF1-4O13559 YNL146WYNL146W 303 nt0.48□□□□□ -2.33
YRF1-4O13559 snR74snR74 88 nt0.47□□□□□ -2.33
YRF1-4O13559 NNF2YGR089W 2811 nt0.47□□□□□ -2.33
YRF1-4O13559 Q0142Q0142 177 nt0.46□□□□□ -2.34
YRF1-4O13559 YHR131W-AYHR131W-A 246 nt0.46□□□□□ -2.34
YRF1-4O13559 YIR030W-AYIR030W-A 384 nt0.46□□□□□ -2.34
YRF1-4O13559 YDR366CYDR366C 399 nt0.45□□□□□ -2.34
YRF1-4O13559 SBH1YER087C-B 249 nt0.45□□□□□ -2.34
YRF1-4O13559 YPR010C-AYPR010C-A 219 nt0.44□□□□□ -2.34
YRF1-4O13559 YER053C-AYER053C-A 114 nt0.43□□□□□ -2.34
YRF1-4O13559 YIL002W-AYIL002W-A 210 nt0.43□□□□□ -2.34
YRF1-4O13559 RPM2YML091C 3609 nt0.42□□□□□ -2.34
YRF1-4O13559 NIP1YMR309C 2439 nt0.41□□□□□ -2.34
YRF1-4O13559 YDR371C-AYDR371C-A 105 nt0.41□□□□□ -2.34
YRF1-4O13559 tF(GAA)QtF(GAA)Q 75 nt0.41□□□□□ -2.34
YRF1-4O13559 SNU13YEL026W 381 nt0.41□□□□□ -2.34
YRF1-4O13559 RPS26AYGL189C 360 nt0.4□□□□□ -2.35
YRF1-4O13559 YBL100W-BYBL100W-B 5313 nt0.4□□□□□ -2.35
YRF1-4O13559 YKU70YMR284W 1809 nt0.4□□□□□ -2.35
YRF1-4O13559 ABF2YMR072W 552 nt0.39□□□□□ -2.35
YRF1-4O13559 ESP1YGR098C 4893 nt0.38□□□□□ -2.35
YRF1-4O13559 YLL006W-AYLL006W-A 177 nt0.38□□□□□ -2.35
YRF1-4O13559 YBR182C-AYBR182C-A 195 nt0.38□□□□□ -2.35
YRF1-4O13559 snR49snR49 165 nt0.37□□□□□ -2.35
YRF1-4O13559 snR55snR55 98 nt0.36□□□□□ -2.35
YRF1-4O13559 YCR038W-AYCR038W-A 126 nt0.36□□□□□ -2.35
YRF1-4O13559 CSE1YGL238W 2883 nt0.36□□□□□ -2.35
YRF1-4O13559 YER181CYER181C 324 nt0.35□□□□□ -2.35
YRF1-4O13559 YOR231C-AYOR231C-A 201 nt0.35□□□□□ -2.35
YRF1-4O13559 YPL152W-AYPL152W-A 99 nt0.33□□□□□ -2.36
YRF1-4O13559 ORC3YLL004W 1851 nt0.33□□□□□ -2.36
YRF1-4O13559 YML099W-AYML099W-A 330 nt0.32□□□□□ -2.36
YRF1-4O13559 RCO1YMR075W 2055 nt0.31□□□□□ -2.36
YRF1-4O13559 APQ12YIL040W 417 nt0.31□□□□□ -2.36
YRF1-4O13559 YLR232WYLR232W 348 nt0.3□□□□□ -2.36
YRF1-4O13559 YOL155W-AYOL155W-A 135 nt0.29□□□□□ -2.36
YRF1-4O13559 YOR186C-AYOR186C-A 210 nt0.28□□□□□ -2.36
YRF1-4O13559 YBR072C-AYBR072C-A 162 nt0.28□□□□□ -2.36
YRF1-4O13559 YOL013W-AYOL013W-A 192 nt0.26□□□□□ -2.37
YRF1-4O13559 GLG1YKR058W 1851 nt0.25□□□□□ -2.37
YRF1-4O13559 YGL188C-AYGL188C-A 141 nt0.23□□□□□ -2.37
YRF1-4O13559 YEL073CYEL073C 324 nt0.22□□□□□ -2.37
YRF1-4O13559 snR45snR45 172 nt0.22□□□□□ -2.37
YRF1-4O13559 YMR158W-BYMR158W-B 321 nt0.2□□□□□ -2.38
YRF1-4O13559 YGL041CYGL041C 204 nt0.19□□□□□ -2.38
YRF1-4O13559 SDH6YDR379C-A 240 nt0.17□□□□□ -2.38
YRF1-4O13559 YBL039C-AYBL039C-A 84 nt0.16□□□□□ -2.38
YRF1-4O13559 YBR131C-AYBR131C-A 90 nt0.16□□□□□ -2.38
YRF1-4O13559 YNL097C-BYNL097C-B 123 nt0.12□□□□□ -2.39
YRF1-4O13559 YOR302WYOR302W 78 nt0.12□□□□□ -2.39
YRF1-4O13559 YPL060C-AYPL060C-A 3315 nt0.11□□□□□ -2.39
YRF1-4O13559 COG6YNL041C 2520 nt0.11□□□□□ -2.39
YRF1-4O13559 YGL182CYGL182C 324 nt0.1□□□□□ -2.39
YRF1-4O13559 YOR314W-AYOR314W-A 111 nt0.08□□□□□ -2.4
YRF1-4O13559 YBR099CYBR099C 384 nt0.08□□□□□ -2.4
YRF1-4O13559 YDR544CYDR544C 429 nt0.07□□□□□ -2.4
YRF1-4O13559 SOV1YMR066W 2697 nt0.07□□□□□ -2.4
YRF1-4O13559 YJL182CYJL182C 318 nt0.06□□□□□ -2.4
YRF1-4O13559 YEL014CYEL014C 306 nt0.03□□□□□ -2.4
YRF1-4O13559 YOR381W-AYOR381W-A 168 nt0□□□□□ -2.41
YRF1-4O13559 snR80snR80 171 nt-0.02□□□□□ -2.41
YRF1-4O13559 snR8snR8 190 nt-0.02□□□□□ -2.41
YRF1-4O13559 YOR170WYOR170W 306 nt-0.02□□□□□ -2.41
YRF1-4O13559 TFB5YDR079C-A 219 nt-0.03□□□□□ -2.41
YRF1-4O13559 EST1YLR233C 2100 nt-0.06□□□□□ -2.42
YRF1-4O13559 snR46snR46 197 nt-0.06□□□□□ -2.42
Retrieved 100 of 7,029 protein–RNA pairs in 41.9 ms