Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 AC093323.1-202ENST00000635031 2045 ntBASIC15.65■□□□□ 0.1
COL6A5A8TX70 HIST1H2APS4-201ENST00000362070 348 ntBASIC15.65■□□□□ 0.1
COL6A5A8TX70 AL160237.2-201ENST00000556165 472 ntBASIC15.65■□□□□ 0.1
COL6A5A8TX70 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
COL6A5A8TX70 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC15.65■□□□□ 0.1
COL6A5A8TX70 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC15.65■□□□□ 0.1
COL6A5A8TX70 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
COL6A5A8TX70 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COL6A5A8TX70 AC004870.1-201ENST00000315132 882 ntBASIC15.65■□□□□ 0.1
COL6A5A8TX70 AL662844.1-201ENST00000546340 181 ntBASIC15.65■□□□□ 0.1
COL6A5A8TX70 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
COL6A5A8TX70 AC092119.3-201ENST00000612618 583 ntBASIC15.65■□□□□ 0.1
COL6A5A8TX70 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COL6A5A8TX70 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COL6A5A8TX70 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
COL6A5A8TX70 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC15.65■□□□□ 0.1
COL6A5A8TX70 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC15.65■□□□□ 0.1
COL6A5A8TX70 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
COL6A5A8TX70 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
COL6A5A8TX70 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC15.65■□□□□ 0.1
COL6A5A8TX70 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
COL6A5A8TX70 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
COL6A5A8TX70 FAM220CP-201ENST00000395253 831 ntBASIC15.64■□□□□ 0.1
COL6A5A8TX70 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
COL6A5A8TX70 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
COL6A5A8TX70 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.1
COL6A5A8TX70 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
COL6A5A8TX70 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC15.64■□□□□ 0.09
COL6A5A8TX70 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COL6A5A8TX70 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC15.64■□□□□ 0.09
COL6A5A8TX70 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COL6A5A8TX70 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
COL6A5A8TX70 AC010653.2-201ENST00000623505 997 ntBASIC15.64■□□□□ 0.09
COL6A5A8TX70 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COL6A5A8TX70 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
COL6A5A8TX70 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COL6A5A8TX70 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COL6A5A8TX70 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
COL6A5A8TX70 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC15.64■□□□□ 0.09
COL6A5A8TX70 AP002469.2-201ENST00000531724 424 ntBASIC15.64■□□□□ 0.09
COL6A5A8TX70 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
COL6A5A8TX70 AL441883.1-201ENST00000566170 1045 ntBASIC15.64■□□□□ 0.09
COL6A5A8TX70 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
COL6A5A8TX70 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
COL6A5A8TX70 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
COL6A5A8TX70 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COL6A5A8TX70 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC15.63■□□□□ 0.09
COL6A5A8TX70 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
COL6A5A8TX70 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC15.63■□□□□ 0.09
COL6A5A8TX70 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
COL6A5A8TX70 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC15.63■□□□□ 0.09
COL6A5A8TX70 EXOC3-AS1-202ENST00000623673 1663 ntBASIC15.63■□□□□ 0.09
COL6A5A8TX70 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COL6A5A8TX70 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC15.63■□□□□ 0.09
COL6A5A8TX70 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
COL6A5A8TX70 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC15.63■□□□□ 0.09
COL6A5A8TX70 CYGB-204ENST00000589342 815 ntTSL 3 BASIC15.63■□□□□ 0.09
COL6A5A8TX70 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
COL6A5A8TX70 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC15.62■□□□□ 0.09
COL6A5A8TX70 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC15.62■□□□□ 0.09
COL6A5A8TX70 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
COL6A5A8TX70 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
COL6A5A8TX70 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC15.62■□□□□ 0.09
COL6A5A8TX70 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
COL6A5A8TX70 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
COL6A5A8TX70 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
COL6A5A8TX70 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
COL6A5A8TX70 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC15.62■□□□□ 0.09
COL6A5A8TX70 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
COL6A5A8TX70 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
COL6A5A8TX70 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
COL6A5A8TX70 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
COL6A5A8TX70 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
COL6A5A8TX70 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC15.62■□□□□ 0.09
COL6A5A8TX70 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
COL6A5A8TX70 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC15.61■□□□□ 0.09
COL6A5A8TX70 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC15.61■□□□□ 0.09
COL6A5A8TX70 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
COL6A5A8TX70 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL6A5A8TX70 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
COL6A5A8TX70 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL6A5A8TX70 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
COL6A5A8TX70 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL6A5A8TX70 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
COL6A5A8TX70 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC15.61■□□□□ 0.09
COL6A5A8TX70 AC096733.2-201ENST00000609937 1394 ntBASIC15.61■□□□□ 0.09
COL6A5A8TX70 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
COL6A5A8TX70 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC15.61■□□□□ 0.09
COL6A5A8TX70 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC15.61■□□□□ 0.09
COL6A5A8TX70 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL6A5A8TX70 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC15.61■□□□□ 0.09
COL6A5A8TX70 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL6A5A8TX70 STX5-203ENST00000394690 1568 ntTSL 5 BASIC15.61■□□□□ 0.09
COL6A5A8TX70 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC15.61■□□□□ 0.09
COL6A5A8TX70 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
COL6A5A8TX70 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
COL6A5A8TX70 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC15.61■□□□□ 0.09
COL6A5A8TX70 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
COL6A5A8TX70 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
COL6A5A8TX70 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms