Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC14.11□□□□□ -0.15
TRBV6-4A0A1B0GX49 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV6-4A0A1B0GX49 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC14.11□□□□□ -0.15
TRBV6-4A0A1B0GX49 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV6-4A0A1B0GX49 ISCU-212ENST00000547005 795 ntTSL 3 BASIC14.11□□□□□ -0.15
TRBV6-4A0A1B0GX49 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV6-4A0A1B0GX49 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV6-4A0A1B0GX49 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TRBV6-4A0A1B0GX49 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV6-4A0A1B0GX49 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC14.11□□□□□ -0.15
TRBV6-4A0A1B0GX49 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV6-4A0A1B0GX49 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC14.11□□□□□ -0.15
TRBV6-4A0A1B0GX49 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC14.11□□□□□ -0.15
TRBV6-4A0A1B0GX49 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV6-4A0A1B0GX49 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV6-4A0A1B0GX49 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC14.11□□□□□ -0.15
TRBV6-4A0A1B0GX49 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC14.11□□□□□ -0.15
TRBV6-4A0A1B0GX49 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TRBV6-4A0A1B0GX49 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV6-4A0A1B0GX49 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV6-4A0A1B0GX49 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
TRBV6-4A0A1B0GX49 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV6-4A0A1B0GX49 AL691432.2-201ENST00000607222 2038 ntBASIC14.1□□□□□ -0.15
TRBV6-4A0A1B0GX49 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
TRBV6-4A0A1B0GX49 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
TRBV6-4A0A1B0GX49 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TRBV6-4A0A1B0GX49 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TRBV6-4A0A1B0GX49 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV6-4A0A1B0GX49 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
TRBV6-4A0A1B0GX49 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC14.1□□□□□ -0.15
TRBV6-4A0A1B0GX49 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC14.1□□□□□ -0.15
TRBV6-4A0A1B0GX49 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC14.1□□□□□ -0.15
TRBV6-4A0A1B0GX49 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC14.1□□□□□ -0.15
TRBV6-4A0A1B0GX49 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV6-4A0A1B0GX49 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV6-4A0A1B0GX49 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
TRBV6-4A0A1B0GX49 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV6-4A0A1B0GX49 AC004911.1-201ENST00000416316 871 ntBASIC14.1□□□□□ -0.15
TRBV6-4A0A1B0GX49 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV6-4A0A1B0GX49 AL355472.2-201ENST00000422958 438 ntBASIC14.1□□□□□ -0.15
TRBV6-4A0A1B0GX49 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC14.1□□□□□ -0.15
TRBV6-4A0A1B0GX49 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC14.1□□□□□ -0.15
TRBV6-4A0A1B0GX49 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV6-4A0A1B0GX49 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC14.1□□□□□ -0.15
TRBV6-4A0A1B0GX49 C2orf69P4-201ENST00000565394 541 ntBASIC14.1□□□□□ -0.15
TRBV6-4A0A1B0GX49 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV6-4A0A1B0GX49 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV6-4A0A1B0GX49 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC14.1□□□□□ -0.15
TRBV6-4A0A1B0GX49 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC14.1□□□□□ -0.15
TRBV6-4A0A1B0GX49 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
TRBV6-4A0A1B0GX49 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV6-4A0A1B0GX49 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
TRBV6-4A0A1B0GX49 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC14.1□□□□□ -0.15
TRBV6-4A0A1B0GX49 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV6-4A0A1B0GX49 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC14.1□□□□□ -0.15
TRBV6-4A0A1B0GX49 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV6-4A0A1B0GX49 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV6-4A0A1B0GX49 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
TRBV6-4A0A1B0GX49 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
TRBV6-4A0A1B0GX49 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC14.09□□□□□ -0.15
TRBV6-4A0A1B0GX49 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV6-4A0A1B0GX49 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV6-4A0A1B0GX49 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV6-4A0A1B0GX49 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV6-4A0A1B0GX49 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC14.09□□□□□ -0.15
TRBV6-4A0A1B0GX49 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV6-4A0A1B0GX49 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC14.09□□□□□ -0.15
TRBV6-4A0A1B0GX49 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC14.09□□□□□ -0.15
TRBV6-4A0A1B0GX49 LSM12P1-201ENST00000411836 588 ntBASIC14.09□□□□□ -0.15
TRBV6-4A0A1B0GX49 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC14.09□□□□□ -0.15
TRBV6-4A0A1B0GX49 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC14.09□□□□□ -0.15
TRBV6-4A0A1B0GX49 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV6-4A0A1B0GX49 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC14.09□□□□□ -0.15
TRBV6-4A0A1B0GX49 AC023632.3-201ENST00000521633 145 ntBASIC14.09□□□□□ -0.15
TRBV6-4A0A1B0GX49 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC14.09□□□□□ -0.15
TRBV6-4A0A1B0GX49 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC14.09□□□□□ -0.15
TRBV6-4A0A1B0GX49 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC14.09□□□□□ -0.15
TRBV6-4A0A1B0GX49 AC073111.5-205ENST00000641717 521 ntBASIC14.09□□□□□ -0.15
TRBV6-4A0A1B0GX49 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
TRBV6-4A0A1B0GX49 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV6-4A0A1B0GX49 LBX2-AS1-202ENST00000603175 2083 ntBASIC14.09□□□□□ -0.15
TRBV6-4A0A1B0GX49 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV6-4A0A1B0GX49 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV6-4A0A1B0GX49 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV6-4A0A1B0GX49 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC14.09□□□□□ -0.15
TRBV6-4A0A1B0GX49 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV6-4A0A1B0GX49 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV6-4A0A1B0GX49 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC14.09□□□□□ -0.15
TRBV6-4A0A1B0GX49 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV6-4A0A1B0GX49 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV6-4A0A1B0GX49 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
TRBV6-4A0A1B0GX49 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TRBV6-4A0A1B0GX49 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
TRBV6-4A0A1B0GX49 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TRBV6-4A0A1B0GX49 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
TRBV6-4A0A1B0GX49 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRBV6-4A0A1B0GX49 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRBV6-4A0A1B0GX49 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
TRBV6-4A0A1B0GX49 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
TRBV6-4A0A1B0GX49 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms