Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV41A0A0B4J266 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV41A0A0B4J266 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV41A0A0B4J266 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
TRAV41A0A0B4J266 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC15.74■□□□□ 0.11
TRAV41A0A0B4J266 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV41A0A0B4J266 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV41A0A0B4J266 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV41A0A0B4J266 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV41A0A0B4J266 AL512408.1-201ENST00000569378 2000 ntBASIC15.73■□□□□ 0.11
TRAV41A0A0B4J266 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV41A0A0B4J266 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV41A0A0B4J266 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV41A0A0B4J266 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC15.73■□□□□ 0.11
TRAV41A0A0B4J266 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC15.73■□□□□ 0.11
TRAV41A0A0B4J266 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC15.73■□□□□ 0.11
TRAV41A0A0B4J266 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV41A0A0B4J266 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC15.73■□□□□ 0.11
TRAV41A0A0B4J266 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV41A0A0B4J266 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV41A0A0B4J266 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV41A0A0B4J266 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV41A0A0B4J266 GAS7-202ENST00000396115 929 ntTSL 5 BASIC15.73■□□□□ 0.11
TRAV41A0A0B4J266 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
TRAV41A0A0B4J266 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
TRAV41A0A0B4J266 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV41A0A0B4J266 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC15.73■□□□□ 0.11
TRAV41A0A0B4J266 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV41A0A0B4J266 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV41A0A0B4J266 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC15.73■□□□□ 0.11
TRAV41A0A0B4J266 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC15.73■□□□□ 0.11
TRAV41A0A0B4J266 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC15.73■□□□□ 0.11
TRAV41A0A0B4J266 SOX15-203ENST00000570788 1093 ntBASIC15.73■□□□□ 0.11
TRAV41A0A0B4J266 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC15.73■□□□□ 0.11
TRAV41A0A0B4J266 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC15.73■□□□□ 0.11
TRAV41A0A0B4J266 KRT16P6-202ENST00000425692 1426 ntBASIC15.73■□□□□ 0.11
TRAV41A0A0B4J266 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV41A0A0B4J266 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV41A0A0B4J266 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC15.73■□□□□ 0.11
TRAV41A0A0B4J266 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV41A0A0B4J266 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV41A0A0B4J266 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV41A0A0B4J266 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV41A0A0B4J266 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV41A0A0B4J266 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC15.72■□□□□ 0.11
TRAV41A0A0B4J266 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV41A0A0B4J266 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV41A0A0B4J266 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV41A0A0B4J266 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV41A0A0B4J266 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV41A0A0B4J266 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV41A0A0B4J266 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC15.72■□□□□ 0.11
TRAV41A0A0B4J266 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV41A0A0B4J266 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV41A0A0B4J266 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC15.72■□□□□ 0.11
TRAV41A0A0B4J266 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC15.72■□□□□ 0.11
TRAV41A0A0B4J266 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV41A0A0B4J266 UNC93B5-201ENST00000530315 699 ntBASIC15.72■□□□□ 0.11
TRAV41A0A0B4J266 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC15.72■□□□□ 0.11
TRAV41A0A0B4J266 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC15.72■□□□□ 0.11
TRAV41A0A0B4J266 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC15.72■□□□□ 0.11
TRAV41A0A0B4J266 AC006557.6-201ENST00000623071 864 ntBASIC15.72■□□□□ 0.11
TRAV41A0A0B4J266 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
TRAV41A0A0B4J266 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV41A0A0B4J266 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC15.72■□□□□ 0.11
TRAV41A0A0B4J266 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV41A0A0B4J266 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV41A0A0B4J266 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
TRAV41A0A0B4J266 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
TRAV41A0A0B4J266 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRAV41A0A0B4J266 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV41A0A0B4J266 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV41A0A0B4J266 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV41A0A0B4J266 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
TRAV41A0A0B4J266 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC15.71■□□□□ 0.11
TRAV41A0A0B4J266 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
TRAV41A0A0B4J266 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC15.71■□□□□ 0.11
TRAV41A0A0B4J266 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV41A0A0B4J266 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV41A0A0B4J266 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV41A0A0B4J266 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV41A0A0B4J266 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC15.71■□□□□ 0.11
TRAV41A0A0B4J266 ABHD17AP6-201ENST00000458502 1044 ntBASIC15.71■□□□□ 0.11
TRAV41A0A0B4J266 SLC29A4P2-201ENST00000504749 1089 ntBASIC15.71■□□□□ 0.11
TRAV41A0A0B4J266 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC15.71■□□□□ 0.11
TRAV41A0A0B4J266 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV41A0A0B4J266 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
TRAV41A0A0B4J266 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV41A0A0B4J266 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV41A0A0B4J266 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRAV41A0A0B4J266 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
TRAV41A0A0B4J266 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.11
TRAV41A0A0B4J266 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC15.71■□□□□ 0.1
TRAV41A0A0B4J266 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
TRAV41A0A0B4J266 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRAV41A0A0B4J266 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC15.7■□□□□ 0.1
TRAV41A0A0B4J266 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRAV41A0A0B4J266 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC15.7■□□□□ 0.1
TRAV41A0A0B4J266 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TRAV41A0A0B4J266 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms